FFCP PHASE1:Hg19::chr17:932596..932605,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C839|description=CAGE_peak_at_chr17:932596..932605,-|id=chr17:932596..932605,-|ontology_enrichment_celltype=CL:0002586!1.11e-24!3;CL:0000149!1.14e-18!4;CL:0000147!3.63e-09!14;CL:0002566!1.16e-08!1|ontology_enrichment_celltype_v019=CL:0002586;6.25e-45;3!CL:0000149;5.06e-34;4!CL:0000147;1.64e-10;14|ontology_enrichment_celltype_v019_2=CL:0002586,6.25e-45,3;CL:0000149,5.06e-34,4;CL:0000147,1.64e-10,14|ontology_enrichment_development_v019=UBERON:0003056;2.07e-12;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000966!5.66e-26!5;UBERON:0005388!5.66e-26!5;UBERON:0001802!5.66e-26!5;UBERON:0001781!1.11e-24!3;UBERON:0001782!1.11e-24!3;UBERON:0005424!1.11e-24!3;UBERON:0003296!1.21e-18!4;UBERON:0010133!1.21e-18!4;UBERON:0001905!4.91e-17!2;UBERON:0002757!4.91e-17!2;UBERON:0010134!4.91e-17!2;UBERON:0002784!4.91e-17!2;UBERON:0005408!4.91e-17!2;UBERON:0001899!4.91e-17!2;UBERON:0001896!2.15e-11!3;UBERON:0005290!2.15e-11!3;UBERON:0010096!2.15e-11!3;UBERON:0001894!6.94e-11!7;UBERON:0006222!6.94e-11!7;UBERON:0000970!7.03e-10!20;UBERON:0000073!1.38e-09!94;UBERON:0001016!1.38e-09!94;UBERON:0002104!2.13e-09!21;UBERON:0005743!5.37e-09!86;UBERON:0000020!1.46e-08!23;UBERON:0001032!3.40e-08!24;UBERON:0004456!3.40e-08!24;UBERON:0003075!1.75e-07!86;UBERON:0007284!1.75e-07!86;UBERON:0007625!4.23e-07!11;UBERON:0002346!4.40e-07!90;UBERON:0000019!6.07e-07!19;UBERON:0000047!6.07e-07!19;UBERON:0004088!6.07e-07!19;UBERON:0003072!6.07e-07!19;UBERON:0003071!6.07e-07!19;UBERON:0004128!6.07e-07!19|ontology_enrichment_uberon_v019=UBERON:0003296;1.16e-73;4!UBERON:0010133;1.16e-73;4!UBERON:0001905;7.72e-66;2!UBERON:0002757;7.72e-66;2!UBERON:0010134;7.72e-66;2!UBERON:0005408;7.72e-66;2!UBERON:0001899;7.72e-66;2!UBERON:0000966;6.03e-60;5!UBERON:0005388;6.03e-60;5!UBERON:0001802;6.03e-60;5!UBERON:0001781;6.25e-45;3!UBERON:0001782;6.25e-45;3!UBERON:0001894;1.42e-42;7!UBERON:0002784;1.38e-33;4!UBERON:0000007;1.07e-17;2!UBERON:0000019;1.75e-16;19!UBERON:0000047;1.75e-16;19!UBERON:0004088;1.75e-16;19!UBERON:0010230;1.75e-16;19!UBERON:0000970;1.06e-15;20!UBERON:0002104;5.40e-15;21!UBERON:0001456;5.40e-15;21!UBERON:0000020;9.23e-14;23!UBERON:0001032;3.20e-13;24!UBERON:0004456;3.20e-13;24!UBERON:0007625;4.25e-13;11!UBERON:0002368;5.75e-08;33|ontology_enrichment_uberon_v019_2=UBERON:0003296,1.16e-73,4;UBERON:0010133,1.16e-73,4;UBERON:0001905,7.73e-66,2;UBERON:0002757,7.73e-66,2;UBERON:0010134,7.73e-66,2;UBERON:0005408,7.73e-66,2;UBERON:0001899,7.73e-66,2;UBERON:0000966,3.84e-50,6;UBERON:0005388,3.84e-50,6;UBERON:0001802,3.84e-50,6;UBERON:0001782,6.25e-45,3;UBERON:0005424,6.25e-45,3;UBERON:0001894,1.42e-42,7;UBERON:0006222,1.42e-42,7;UBERON:0001781,5.06e-34,4;UBERON:0002784,1.38e-33,4;UBERON:0003056,1.49e-19,61;UBERON:0000007,1.07e-17,2;UBERON:0000019,1.06e-15,20;UBERON:0000047,1.06e-15,20;UBERON:0010312,1.06e-15,20;UBERON:0004088,1.06e-15,20;UBERON:0010230,1.06e-15,20;UBERON:0003072,1.06e-15,20;UBERON:0004128,1.06e-15,20;UBERON:0003071,1.06e-15,20;UBERON:0000970,5.40e-15,21;UBERON:0002104,5.40e-15,21;UBERON:0003075,9.81e-15,82;UBERON:0007284,9.81e-15,82;UBERON:0001456,2.38e-14,22;UBERON:0002346,4.44e-14,86;UBERON:0000020,3.20e-13,24;UBERON:0001032,3.20e-13,24;UBERON:0004456,3.20e-13,24;UBERON:0007625,4.25e-13,11;UBERON:0010371,9.68e-12,104;UBERON:0005085,2.08e-10,31;UBERON:0010314,2.38e-09,132;UBERON:0002368,3.43e-09,35;UBERON:0002780,8.93e-08,41;UBERON:0001890,8.93e-08,41;UBERON:0003080,8.93e-08,41;UBERON:0006240,8.93e-08,41;UBERON:0000949,2.66e-07,45;UBERON:0004121,3.21e-07,171;UBERON:0000924,3.21e-07,171;UBERON:0006601,3.21e-07,171;UBERON:0001444,7.75e-07,49|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7709052548883,2.95213181129735,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C839 | |||
|description=CAGE_peak_at_chr17:932596..932605,- | |||
|id=chr17:932596..932605,- | |||
|ontology_enrichment_celltype=CL:0002586!1.11e-24!3;CL:0000149!1.14e-18!4;CL:0000147!3.63e-09!14;CL:0002566!1.16e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0002586;6.25e-45;3!CL:0000149;5.06e-34;4!CL:0000147;1.64e-10;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,6.25e-45,3;CL:0000149,5.06e-34,4;CL:0000147,1.64e-10,14 | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.07e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000966!5.66e-26!5;UBERON:0005388!5.66e-26!5;UBERON:0001802!5.66e-26!5;UBERON:0001781!1.11e-24!3;UBERON:0001782!1.11e-24!3;UBERON:0005424!1.11e-24!3;UBERON:0003296!1.21e-18!4;UBERON:0010133!1.21e-18!4;UBERON:0001905!4.91e-17!2;UBERON:0002757!4.91e-17!2;UBERON:0010134!4.91e-17!2;UBERON:0002784!4.91e-17!2;UBERON:0005408!4.91e-17!2;UBERON:0001899!4.91e-17!2;UBERON:0001896!2.15e-11!3;UBERON:0005290!2.15e-11!3;UBERON:0010096!2.15e-11!3;UBERON:0001894!6.94e-11!7;UBERON:0006222!6.94e-11!7;UBERON:0000970!7.03e-10!20;UBERON:0000073!1.38e-09!94;UBERON:0001016!1.38e-09!94;UBERON:0002104!2.13e-09!21;UBERON:0005743!5.37e-09!86;UBERON:0000020!1.46e-08!23;UBERON:0001032!3.40e-08!24;UBERON:0004456!3.40e-08!24;UBERON:0003075!1.75e-07!86;UBERON:0007284!1.75e-07!86;UBERON:0007625!4.23e-07!11;UBERON:0002346!4.40e-07!90;UBERON:0000019!6.07e-07!19;UBERON:0000047!6.07e-07!19;UBERON:0004088!6.07e-07!19;UBERON:0003072!6.07e-07!19;UBERON:0003071!6.07e-07!19;UBERON:0004128!6.07e-07!19 | |||
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|short_description=p@chr17:932596..932605,- | |||
}} |
Revision as of 16:46, 11 September 2013
Short description: | p@chr17:932596..932605, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:932596..932605, - |
Coexpression cluster: | C839_Retinal_Mallassezderived_retina_medulla_mesothelioma_osteosarcoma_Saos2 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 6.25e-45 | 3 |
visual pigment cell | 5.06e-34 | 4 |
pigment cell | 1.64e-10 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.