FFCP PHASE1:Hg19::chr1:170633459..170633473,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=|TSSclassifier=S|UniProt=P54821|association_with_transcript=45bp_to_M95929_5end|coexpression_cluster_id=C851|description=CAGE_peak_1_at_M95929_5end|id=chr1:170633459..170633473,+|ontology_enrichment_celltype=CL:0000055!5.94e-40!180;CL:0000057!1.70e-22!75;CL:0000680!2.61e-16!57;CL:0000056!2.61e-16!57;CL:0000355!2.61e-16!57;CL:0000187!5.11e-15!54;CL:0000183!1.01e-13!59;CL:0000393!1.16e-13!60;CL:0000211!1.16e-13!60;CL:0000192!1.41e-13!42;CL:0000514!1.41e-13!42;CL:0000359!3.52e-12!32;CL:0002620!1.62e-11!23;CL:0002334!1.25e-07!12;CL:0000048!3.15e-07!430;CL:0002539!3.46e-07!10|ontology_enrichment_celltype_v019=CL:0002620;2.84e-14;23!CL:0000359;1.85e-12;32!CL:0000057;8.54e-11;73!CL:0002334;2.88e-09;12!CL:0000192;3.68e-09;43!CL:0002539;9.20e-09;10!CL:0002320;4.41e-08;188!CL:0002570;5.40e-08;8!CL:0000187;1.31e-07;55!CL:0000393;1.57e-07;61!CL:0000211;1.57e-07;61!CL:0000723;7.47e-07;61!CL:0000134;9.88e-07;55|ontology_enrichment_celltype_v019_2=CL:0000057,8.44e-27,76;CL:0000048,9.76e-18,427;CL:0000723,8.83e-17,433;CL:0000680,1.34e-15,58;CL:0000056,1.34e-15,58;CL:0000355,1.34e-15,58;CL:0000034,1.47e-15,441;CL:0002620,1.44e-14,23;CL:0000187,4.51e-14,55;CL:0000359,4.22e-13,32;CL:0000393,7.10e-13,61;CL:0000211,7.10e-13,61;CL:0000192,2.36e-12,43;CL:0000514,2.36e-12,43;CL:0002334,2.40e-09,12;CL:0002539,8.81e-09,10;CL:0002320,2.38e-08,361;CL:0002570,4.00e-08,8;CL:0000134,3.26e-07,354|ontology_enrichment_development_v019=CL:0000514;3.68e-09;43!CL:0000355;7.63e-09;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000914!2.16e-26!83;UBERON:0002329!2.16e-26!83;UBERON:0003077!2.16e-26!83;UBERON:0003059!2.16e-26!83;UBERON:0007282!2.16e-26!83;UBERON:0009618!2.16e-26!83;UBERON:0007285!2.16e-26!83;UBERON:0004290!8.00e-23!70;UBERON:0001134!1.74e-18!61;UBERON:0002036!1.74e-18!61;UBERON:0003082!1.74e-18!61;UBERON:0000486!6.30e-18!82;UBERON:0002385!6.99e-18!63;UBERON:0001015!6.99e-18!63;UBERON:0000383!6.99e-18!63;UBERON:0000475!3.20e-16!365;UBERON:0003102!4.80e-12!95;UBERON:0005256!1.11e-10!143;UBERON:0000481!2.10e-10!347;UBERON:0002199!5.66e-10!45;UBERON:0002416!5.66e-10!45;UBERON:0000468!8.15e-10!659;UBERON:0001637!8.17e-10!42;UBERON:0003509!8.17e-10!42;UBERON:0004572!8.17e-10!42;UBERON:0004872!9.12e-10!84;UBERON:0000479!1.83e-09!787;UBERON:0004573!1.67e-08!33;UBERON:0004571!1.67e-08!33;UBERON:0001013!1.86e-08!14;UBERON:0002097!4.47e-08!40;UBERON:0001981!5.21e-08!60;UBERON:0007500!5.21e-08!60;UBERON:0004537!5.21e-08!60;UBERON:0006965!5.21e-08!60;UBERON:0007100!8.85e-08!27;UBERON:0000948!1.84e-07!24;UBERON:0005498!1.84e-07!24;UBERON:0004140!1.84e-07!24;UBERON:0009881!1.84e-07!24;UBERON:0004141!1.84e-07!24;UBERON:0003084!1.84e-07!24;UBERON:0007005!1.84e-07!24;UBERON:0004139!1.84e-07!24;UBERON:0004291!1.84e-07!24;UBERON:0000119!2.61e-07!312;UBERON:0004237!3.46e-07!10;UBERON:0004695!3.46e-07!10;UBERON:0002111!3.46e-07!10;UBERON:0004178!3.46e-07!10;UBERON:0002100!5.02e-07!216;UBERON:0000467!5.90e-07!625;UBERON:0000480!7.91e-07!626|ontology_enrichment_uberon_v019=UBERON:0002385;2.38e-11;31!UBERON:0001015;2.38e-11;31!UBERON:0000383;2.38e-11;31!UBERON:0001013;3.56e-10;14!UBERON:0004573;3.91e-09;33!UBERON:0004571;3.91e-09;33!UBERON:0004237;9.20e-09;10!UBERON:0004695;9.20e-09;10!UBERON:0002111;9.20e-09;10!UBERON:0004178;9.20e-09;10!UBERON:0002384;1.43e-08;198!UBERON:0002204;1.88e-08;70!UBERON:0001134;1.90e-08;16!UBERON:0002036;1.90e-08;16!UBERON:0002199;1.92e-08;46!UBERON:0002416;1.92e-08;46!UBERON:0000948;1.96e-08;22!UBERON:0002097;4.39e-08;41!UBERON:0007100;1.17e-07;25!UBERON:0001637;1.49e-07;42!UBERON:0003509;1.49e-07;42!UBERON:0004572;1.49e-07;42!UBERON:0002067;5.64e-07;9!UBERON:0003102;8.15e-07;50|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.24e-23,73;UBERON:0002329,2.11e-23,71;UBERON:0003059,2.11e-23,71;UBERON:0007282,2.11e-23,71;UBERON:0004290,2.11e-23,71;UBERON:0009618,2.11e-23,71;UBERON:0003077,8.55e-23,72;UBERON:0007285,8.55e-23,72;UBERON:0000486,1.49e-19,83;UBERON:0007503,1.67e-19,78;UBERON:0001134,3.64e-18,62;UBERON:0002036,3.64e-18,62;UBERON:0003082,3.64e-18,62;UBERON:0002385,4.40e-17,64;UBERON:0001015,4.40e-17,64;UBERON:0000383,4.40e-17,64;UBERON:0002199,1.80e-13,46;UBERON:0002416,1.80e-13,46;UBERON:0003102,6.99e-13,99;UBERON:0004872,5.82e-12,83;UBERON:0001637,4.92e-11,42;UBERON:0003509,4.92e-11,42;UBERON:0004572,4.92e-11,42;UBERON:0002097,5.51e-11,41;UBERON:0001013,2.10e-10,14;UBERON:0005256,2.61e-10,122;UBERON:0004573,2.96e-10,33;UBERON:0004571,2.96e-10,33;UBERON:0000948,1.67e-09,24;UBERON:0005498,1.67e-09,24;UBERON:0004140,1.67e-09,24;UBERON:0009881,1.67e-09,24;UBERON:0004141,1.67e-09,24;UBERON:0003084,1.67e-09,24;UBERON:0007005,1.67e-09,24;UBERON:0004139,1.67e-09,24;UBERON:0004291,1.67e-09,24;UBERON:0003104,1.72e-09,160;UBERON:0009142,1.72e-09,160;UBERON:0007500,3.67e-09,59;UBERON:0001981,3.67e-09,59;UBERON:0004537,3.67e-09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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt=P54821 | |||
|association_with_transcript=45bp_to_M95929_5end | |||
|coexpression_cluster_id=C851 | |||
|description=CAGE_peak_1_at_M95929_5end | |||
|id=chr1:170633459..170633473,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.94e-40!180;CL:0000057!1.70e-22!75;CL:0000680!2.61e-16!57;CL:0000056!2.61e-16!57;CL:0000355!2.61e-16!57;CL:0000187!5.11e-15!54;CL:0000183!1.01e-13!59;CL:0000393!1.16e-13!60;CL:0000211!1.16e-13!60;CL:0000192!1.41e-13!42;CL:0000514!1.41e-13!42;CL:0000359!3.52e-12!32;CL:0002620!1.62e-11!23;CL:0002334!1.25e-07!12;CL:0000048!3.15e-07!430;CL:0002539!3.46e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.84e-14;23!CL:0000359;1.85e-12;32!CL:0000057;8.54e-11;73!CL:0002334;2.88e-09;12!CL:0000192;3.68e-09;43!CL:0002539;9.20e-09;10!CL:0002320;4.41e-08;188!CL:0002570;5.40e-08;8!CL:0000187;1.31e-07;55!CL:0000393;1.57e-07;61!CL:0000211;1.57e-07;61!CL:0000723;7.47e-07;61!CL:0000134;9.88e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.44e-27,76;CL:0000048,9.76e-18,427;CL:0000723,8.83e-17,433;CL:0000680,1.34e-15,58;CL:0000056,1.34e-15,58;CL:0000355,1.34e-15,58;CL:0000034,1.47e-15,441;CL:0002620,1.44e-14,23;CL:0000187,4.51e-14,55;CL:0000359,4.22e-13,32;CL:0000393,7.10e-13,61;CL:0000211,7.10e-13,61;CL:0000192,2.36e-12,43;CL:0000514,2.36e-12,43;CL:0002334,2.40e-09,12;CL:0002539,8.81e-09,10;CL:0002320,2.38e-08,361;CL:0002570,4.00e-08,8;CL:0000134,3.26e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000514;3.68e-09;43!CL:0000355;7.63e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.16e-26!83;UBERON:0002329!2.16e-26!83;UBERON:0003077!2.16e-26!83;UBERON:0003059!2.16e-26!83;UBERON:0007282!2.16e-26!83;UBERON:0009618!2.16e-26!83;UBERON:0007285!2.16e-26!83;UBERON:0004290!8.00e-23!70;UBERON:0001134!1.74e-18!61;UBERON:0002036!1.74e-18!61;UBERON:0003082!1.74e-18!61;UBERON:0000486!6.30e-18!82;UBERON:0002385!6.99e-18!63;UBERON:0001015!6.99e-18!63;UBERON:0000383!6.99e-18!63;UBERON:0000475!3.20e-16!365;UBERON:0003102!4.80e-12!95;UBERON:0005256!1.11e-10!143;UBERON:0000481!2.10e-10!347;UBERON:0002199!5.66e-10!45;UBERON:0002416!5.66e-10!45;UBERON:0000468!8.15e-10!659;UBERON:0001637!8.17e-10!42;UBERON:0003509!8.17e-10!42;UBERON:0004572!8.17e-10!42;UBERON:0004872!9.12e-10!84;UBERON:0000479!1.83e-09!787;UBERON:0004573!1.67e-08!33;UBERON:0004571!1.67e-08!33;UBERON:0001013!1.86e-08!14;UBERON:0002097!4.47e-08!40;UBERON:0001981!5.21e-08!60;UBERON:0007500!5.21e-08!60;UBERON:0004537!5.21e-08!60;UBERON:0006965!5.21e-08!60;UBERON:0007100!8.85e-08!27;UBERON:0000948!1.84e-07!24;UBERON:0005498!1.84e-07!24;UBERON:0004140!1.84e-07!24;UBERON:0009881!1.84e-07!24;UBERON:0004141!1.84e-07!24;UBERON:0003084!1.84e-07!24;UBERON:0007005!1.84e-07!24;UBERON:0004139!1.84e-07!24;UBERON:0004291!1.84e-07!24;UBERON:0000119!2.61e-07!312;UBERON:0004237!3.46e-07!10;UBERON:0004695!3.46e-07!10;UBERON:0002111!3.46e-07!10;UBERON:0004178!3.46e-07!10;UBERON:0002100!5.02e-07!216;UBERON:0000467!5.90e-07!625;UBERON:0000480!7.91e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;2.38e-11;31!UBERON:0001015;2.38e-11;31!UBERON:0000383;2.38e-11;31!UBERON:0001013;3.56e-10;14!UBERON:0004573;3.91e-09;33!UBERON:0004571;3.91e-09;33!UBERON:0004237;9.20e-09;10!UBERON:0004695;9.20e-09;10!UBERON:0002111;9.20e-09;10!UBERON:0004178;9.20e-09;10!UBERON:0002384;1.43e-08;198!UBERON:0002204;1.88e-08;70!UBERON:0001134;1.90e-08;16!UBERON:0002036;1.90e-08;16!UBERON:0002199;1.92e-08;46!UBERON:0002416;1.92e-08;46!UBERON:0000948;1.96e-08;22!UBERON:0002097;4.39e-08;41!UBERON:0007100;1.17e-07;25!UBERON:0001637;1.49e-07;42!UBERON:0003509;1.49e-07;42!UBERON:0004572;1.49e-07;42!UBERON:0002067;5.64e-07;9!UBERON:0003102;8.15e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.24e-23,73;UBERON:0002329,2.11e-23,71;UBERON:0003059,2.11e-23,71;UBERON:0007282,2.11e-23,71;UBERON:0004290,2.11e-23,71;UBERON:0009618,2.11e-23,71;UBERON:0003077,8.55e-23,72;UBERON:0007285,8.55e-23,72;UBERON:0000486,1.49e-19,83;UBERON:0007503,1.67e-19,78;UBERON:0001134,3.64e-18,62;UBERON:0002036,3.64e-18,62;UBERON:0003082,3.64e-18,62;UBERON:0002385,4.40e-17,64;UBERON:0001015,4.40e-17,64;UBERON:0000383,4.40e-17,64;UBERON:0002199,1.80e-13,46;UBERON:0002416,1.80e-13,46;UBERON:0003102,6.99e-13,99;UBERON:0004872,5.82e-12,83;UBERON:0001637,4.92e-11,42;UBERON:0003509,4.92e-11,42;UBERON:0004572,4.92e-11,42;UBERON:0002097,5.51e-11,41;UBERON:0001013,2.10e-10,14;UBERON:0005256,2.61e-10,122;UBERON:0004573,2.96e-10,33;UBERON:0004571,2.96e-10,33;UBERON:0000948,1.67e-09,24;UBERON:0005498,1.67e-09,24;UBERON:0004140,1.67e-09,24;UBERON:0009881,1.67e-09,24;UBERON:0004141,1.67e-09,24;UBERON:0003084,1.67e-09,24;UBERON:0007005,1.67e-09,24;UBERON:0004139,1.67e-09,24;UBERON:0004291,1.67e-09,24;UBERON:0003104,1.72e-09,160;UBERON:0009142,1.72e-09,160;UBERON:0007500,3.67e-09,59;UBERON:0001981,3.67e-09,59;UBERON:0004537,3.67e-09,59;UBERON:0006965,3.67e-09,59;UBERON:0000926,4.42e-09,315;UBERON:0004120,4.42e-09,315;UBERON:0006603,4.42e-09,315;UBERON:0002384,6.50e-09,371;UBERON:0004237,8.81e-09,10;UBERON:0004695,8.81e-09,10;UBERON:0002111,8.81e-09,10;UBERON:0004178,8.81e-09,10;UBERON:0007100,1.30e-08,27;UBERON:0000479,3.49e-08,773;UBERON:0002204,2.75e-07,167;UBERON:0002067,4.88e-07,9;UBERON:0004016,4.88e-07,9;UBERON:0010083,4.88e-07,9 | |||
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| |||
|short_description=p1@M95929 | |||
}} |
Revision as of 01:42, 12 September 2013
Short description: | p1@M95929 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_M95929_5end |
Coexpression cluster: | C851_Fibroblast_mesenchymal_Myoblast_normal_Olfactory_skeletal_Osteoblast |
Association with transcript: | 45bp_to_M95929_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.44e-27 | 76 |
multi fate stem cell | 9.76e-18 | 427 |
somatic stem cell | 8.83e-17 | 433 |
muscle precursor cell | 1.34e-15 | 58 |
myoblast | 1.34e-15 | 58 |
multi-potent skeletal muscle stem cell | 1.34e-15 | 58 |
stem cell | 1.47e-15 | 441 |
skin fibroblast | 1.44e-14 | 23 |
muscle cell | 4.51e-14 | 55 |
vascular associated smooth muscle cell | 4.22e-13 | 32 |
electrically responsive cell | 7.10e-13 | 61 |
electrically active cell | 7.10e-13 | 61 |
smooth muscle cell | 2.36e-12 | 43 |
smooth muscle myoblast | 2.36e-12 | 43 |
preadipocyte | 2.40e-09 | 12 |
aortic smooth muscle cell | 8.81e-09 | 10 |
connective tissue cell | 2.38e-08 | 361 |
mesenchymal stem cell of adipose | 4.00e-08 | 8 |
mesenchymal cell | 3.26e-07 | 354 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.