FFCP PHASE1:Hg19::chr21:46340782..46340803,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3689|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6155|TSSclassifier=S|UniProt=E5RGK9,F5H0T6|association_with_transcript=0bp_to_ENST00000523323,ENST00000545414_5end|coexpression_cluster_id=C26|description=CAGE_peak_2_at_ITGB2_5end|id=chr21:46340782..46340803,-|ontology_enrichment_celltype=CL:0000037!4.32e-71!172;CL:0000566!4.32e-71!172;CL:0002032!7.06e-67!165;CL:0000837!7.06e-67!165;CL:0000988!2.08e-66!182;CL:0000738!8.62e-65!140;CL:0002087!2.15e-57!119;CL:0002031!2.44e-54!124;CL:0000763!2.27e-46!112;CL:0000049!2.27e-46!112;CL:0000766!2.58e-41!76;CL:0002009!1.01e-38!65;CL:0002194!1.11e-37!63;CL:0000576!1.11e-37!63;CL:0000040!1.11e-37!63;CL:0000559!1.11e-37!63;CL:0000557!7.94e-37!71;CL:0000839!4.91e-35!70;CL:0002057!3.93e-33!42;CL:0000860!2.50e-29!45;CL:0000542!4.30e-17!53;CL:0000051!4.30e-17!53;CL:0000838!4.47e-17!52;CL:0000791!1.07e-10!18;CL:0000789!1.07e-10!18;CL:0002420!1.07e-10!18;CL:0002419!1.07e-10!18;CL:0000790!1.07e-10!18;CL:0000084!3.34e-10!25;CL:0000827!3.34e-10!25;CL:0000134!3.95e-10!358;CL:0002320!4.56e-09!365;CL:0002393!1.63e-08!9;CL:0002397!1.63e-08!9;CL:0000625!9.39e-08!11;CL:0000094!2.33e-07!8|ontology_enrichment_celltype_v019=CL:0000473;1.20e-25;39!CL:0000234;1.20e-25;39!CL:0000860;2.54e-25;33!CL:0002057;2.54e-25;33!CL:0000576;4.83e-25;48!CL:0000766;4.45e-19;69!CL:0002087;1.27e-17;104!CL:0000738;5.53e-15;136!CL:0000763;9.95e-15;100!CL:0000988;3.07e-12;177!CL:0000791;2.13e-11;18!CL:0000789;2.13e-11;18!CL:0002419;2.13e-11;18!CL:0000084;5.32e-11;25!CL:0000542;2.87e-10;53!CL:0000625;3.12e-08;11!CL:0000094;8.25e-08;8|ontology_enrichment_celltype_v019_2=CL:0000037,1.69e-74,168;CL:0000738,8.34e-71,136;CL:0002032,5.34e-70,161;CL:0000837,5.34e-70,161;CL:0000988,1.69e-67,177;CL:0002087,1.73e-65,115;CL:0002031,1.21e-58,120;CL:0000763,1.20e-48,108;CL:0000049,1.20e-48,108;CL:0002009,8.11e-47,61;CL:0000766,1.46e-46,72;CL:0002194,1.02e-45,59;CL:0000576,1.02e-45,59;CL:0000040,1.02e-45,59;CL:0000559,1.02e-45,59;CL:0000557,1.24e-41,67;CL:0000473,6.36e-41,48;CL:0000234,6.36e-41,48;CL:0000839,1.02e-38,66;CL:0000860,1.41e-35,42;CL:0002057,1.41e-35,42;CL:0000542,7.21e-18,53;CL:0000051,7.21e-18,53;CL:0000838,7.57e-18,52;CL:0000791,2.12e-11,18;CL:0000789,2.12e-11,18;CL:0002420,2.12e-11,18;CL:0002419,2.12e-11,18;CL:0000790,2.12e-11,18;CL:0000134,3.32e-11,354;CL:0000084,5.45e-11,25;CL:0000827,5.45e-11,25;CL:0002320,3.64e-10,361;CL:0002393,4.75e-09,9;CL:0002397,4.75e-09,9;CL:0000625,3.12e-08,11;CL:0000094,8.29e-08,8;CL:0000219,4.30e-07,386|ontology_enrichment_development_v019=CL:0002057;1.28e-25;42!CL:0000049;2.94e-14;108!CL:0000790;2.13e-11;18!CL:0000051;2.87e-10;53|ontology_enrichment_disease=DOID:1240!1.03e-07!39|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:1240,4.02e-07,39|ontology_enrichment_uberon=UBERON:0002390!3.06e-40!102;UBERON:0003061!3.06e-40!102;UBERON:0002193!2.54e-35!112;UBERON:0002371!2.95e-30!80;UBERON:0001474!6.01e-26!86;UBERON:0007023!9.58e-26!115;UBERON:0002405!7.98e-22!115;UBERON:0004765!5.78e-20!101;UBERON:0001434!5.78e-20!101;UBERON:0000178!1.94e-08!15;UBERON:0000179!1.94e-08!15;UBERON:0000463!1.94e-08!15;UBERON:0002384!2.91e-08!375;UBERON:0003081!4.45e-08!216|ontology_enrichment_uberon_v019=UBERON:0007023;6.49e-07;114!UBERON:0000178;9.65e-07;15!UBERON:0000179;9.65e-07;15!UBERON:0000463;9.65e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.36e-43,98;UBERON:0003061,5.36e-43,98;UBERON:0002193,4.98e-38,108;UBERON:0002371,1.76e-34,76;UBERON:0002405,6.34e-32,93;UBERON:0001474,8.17e-30,82;UBERON:0007023,9.02e-26,114;UBERON:0004765,1.19e-24,90;UBERON:0001434,9.78e-21,100;UBERON:0003081,2.85e-10,203;UBERON:0002384,3.35e-09,371;UBERON:0000178,9.72e-07,15;UBERON:0000179,9.72e-07,15;UBERON:0000463,9.72e-07,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.72325146451775,0,0,0,0,0,0,0,0,0,24.6815300565883,15.7633131743896,22.0390187678302,297.77675757462,209.570851361078,272.011928666346,0,0,0,0.46480320348181,3.12772311472327,27.3048408581408,305.805465509596,305.028104602086,249.128479581798,225.930713508084,184.619389630818,202.969547295739,275.384264248496,206.32026525409,168.353338464344,339.811251956111,208.050951339044,201.618847452712,398.453963366178,266.663295496794,213.306971359504,387.838890828696,259.484842800698,273.56150292057,334.694879706751,219.14363849645,153.486139875993,386.277872172079,272.147814960527,218.013959897473,352.281188599413,251.124744945635,206.719004008357,420.803396011447,289.366464592481,180.618452208717,346.723158054306,251.876249596957,214.36538972395,360.818103569488,298.304885149927,225.32121985791,331.459544223437,391.829724835575,265.427845213604,362.596821340886,404.126018636493,270.340436824489,301.828495621982,377.941686678271,295.915929098707,28.1593991138116,31.1299008419415,31.1328238852244,24.7503529088574,19.2190073777286,23.5648500381338,31.0691090208885,22.8972901088487,13.6611112586268,31.1235710366598,12.9972897562578,14.5388461436928,46.52221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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3689 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6155 | |||
|TSSclassifier=S | |||
|UniProt=E5RGK9,F5H0T6 | |||
|association_with_transcript=0bp_to_ENST00000523323,ENST00000545414_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_2_at_ITGB2_5end | |||
|id=chr21:46340782..46340803,- | |||
|ontology_enrichment_celltype=CL:0000037!4.32e-71!172;CL:0000566!4.32e-71!172;CL:0002032!7.06e-67!165;CL:0000837!7.06e-67!165;CL:0000988!2.08e-66!182;CL:0000738!8.62e-65!140;CL:0002087!2.15e-57!119;CL:0002031!2.44e-54!124;CL:0000763!2.27e-46!112;CL:0000049!2.27e-46!112;CL:0000766!2.58e-41!76;CL:0002009!1.01e-38!65;CL:0002194!1.11e-37!63;CL:0000576!1.11e-37!63;CL:0000040!1.11e-37!63;CL:0000559!1.11e-37!63;CL:0000557!7.94e-37!71;CL:0000839!4.91e-35!70;CL:0002057!3.93e-33!42;CL:0000860!2.50e-29!45;CL:0000542!4.30e-17!53;CL:0000051!4.30e-17!53;CL:0000838!4.47e-17!52;CL:0000791!1.07e-10!18;CL:0000789!1.07e-10!18;CL:0002420!1.07e-10!18;CL:0002419!1.07e-10!18;CL:0000790!1.07e-10!18;CL:0000084!3.34e-10!25;CL:0000827!3.34e-10!25;CL:0000134!3.95e-10!358;CL:0002320!4.56e-09!365;CL:0002393!1.63e-08!9;CL:0002397!1.63e-08!9;CL:0000625!9.39e-08!11;CL:0000094!2.33e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.20e-25;39!CL:0000234;1.20e-25;39!CL:0000860;2.54e-25;33!CL:0002057;2.54e-25;33!CL:0000576;4.83e-25;48!CL:0000766;4.45e-19;69!CL:0002087;1.27e-17;104!CL:0000738;5.53e-15;136!CL:0000763;9.95e-15;100!CL:0000988;3.07e-12;177!CL:0000791;2.13e-11;18!CL:0000789;2.13e-11;18!CL:0002419;2.13e-11;18!CL:0000084;5.32e-11;25!CL:0000542;2.87e-10;53!CL:0000625;3.12e-08;11!CL:0000094;8.25e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.69e-74,168;CL:0000738,8.34e-71,136;CL:0002032,5.34e-70,161;CL:0000837,5.34e-70,161;CL:0000988,1.69e-67,177;CL:0002087,1.73e-65,115;CL:0002031,1.21e-58,120;CL:0000763,1.20e-48,108;CL:0000049,1.20e-48,108;CL:0002009,8.11e-47,61;CL:0000766,1.46e-46,72;CL:0002194,1.02e-45,59;CL:0000576,1.02e-45,59;CL:0000040,1.02e-45,59;CL:0000559,1.02e-45,59;CL:0000557,1.24e-41,67;CL:0000473,6.36e-41,48;CL:0000234,6.36e-41,48;CL:0000839,1.02e-38,66;CL:0000860,1.41e-35,42;CL:0002057,1.41e-35,42;CL:0000542,7.21e-18,53;CL:0000051,7.21e-18,53;CL:0000838,7.57e-18,52;CL:0000791,2.12e-11,18;CL:0000789,2.12e-11,18;CL:0002420,2.12e-11,18;CL:0002419,2.12e-11,18;CL:0000790,2.12e-11,18;CL:0000134,3.32e-11,354;CL:0000084,5.45e-11,25;CL:0000827,5.45e-11,25;CL:0002320,3.64e-10,361;CL:0002393,4.75e-09,9;CL:0002397,4.75e-09,9;CL:0000625,3.12e-08,11;CL:0000094,8.29e-08,8;CL:0000219,4.30e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.28e-25;42!CL:0000049;2.94e-14;108!CL:0000790;2.13e-11;18!CL:0000051;2.87e-10;53 | |||
|ontology_enrichment_disease=DOID:1240!1.03e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:1240,4.02e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.06e-40!102;UBERON:0003061!3.06e-40!102;UBERON:0002193!2.54e-35!112;UBERON:0002371!2.95e-30!80;UBERON:0001474!6.01e-26!86;UBERON:0007023!9.58e-26!115;UBERON:0002405!7.98e-22!115;UBERON:0004765!5.78e-20!101;UBERON:0001434!5.78e-20!101;UBERON:0000178!1.94e-08!15;UBERON:0000179!1.94e-08!15;UBERON:0000463!1.94e-08!15;UBERON:0002384!2.91e-08!375;UBERON:0003081!4.45e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;6.49e-07;114!UBERON:0000178;9.65e-07;15!UBERON:0000179;9.65e-07;15!UBERON:0000463;9.65e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.36e-43,98;UBERON:0003061,5.36e-43,98;UBERON:0002193,4.98e-38,108;UBERON:0002371,1.76e-34,76;UBERON:0002405,6.34e-32,93;UBERON:0001474,8.17e-30,82;UBERON:0007023,9.02e-26,114;UBERON:0004765,1.19e-24,90;UBERON:0001434,9.78e-21,100;UBERON:0003081,2.85e-10,203;UBERON:0002384,3.35e-09,371;UBERON:0000178,9.72e-07,15;UBERON:0000179,9.72e-07,15;UBERON:0000463,9.72e-07,15 | |||
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| |||
|short_description=p2@ITGB2 | |||
}} |
Revision as of 10:43, 12 September 2013
Short description: | p2@ITGB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ITGB2_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000523323, ENST00000545414_5end |
EntrezGene: | ITGB2 |
HGNC: | 6155 |
UniProt: | E5RGK9F5H0T6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.36e-43 | 98 |
blood island | 5.36e-43 | 98 |
hemolymphoid system | 4.98e-38 | 108 |
bone marrow | 1.76e-34 | 76 |
immune system | 6.34e-32 | 93 |
bone element | 8.17e-30 | 82 |
adult organism | 9.02e-26 | 114 |
skeletal element | 1.19e-24 | 90 |
skeletal system | 9.78e-21 | 100 |
lateral plate mesoderm | 2.85e-10 | 203 |
connective tissue | 3.35e-09 | 371 |
blood | 9.72e-07 | 15 |
haemolymphatic fluid | 9.72e-07 | 15 |
organism substance | 9.72e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
leukemia | 4.02e-07 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.