FFCP PHASE1:Hg19::chr22:19701639..19701671,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5413|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9164|TSSclassifier=W|UniProt=Q99719|association_with_transcript=-315bp_to_ENST00000455784,NM_002688,uc002zpv.1_5end|description=CAGE_peak_4_at_SEPT5_5end|id=chr22:19701639..19701671,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000097;4.92e-07;5|ontology_enrichment_celltype_v019_2=CL:0000097,5.10e-07,5;CL:0002028,5.10e-07,5|ontology_enrichment_development_v019=UBERON:0006215;4.05e-13;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005743!2.85e-17!86;UBERON:0001049!5.09e-16!57;UBERON:0005068!5.09e-16!57;UBERON:0006241!5.09e-16!57;UBERON:0007135!5.09e-16!57;UBERON:0007023!6.24e-16!115;UBERON:0001017!1.19e-15!82;UBERON:0002616!1.54e-15!59;UBERON:0000073!1.78e-15!94;UBERON:0001016!1.78e-15!94;UBERON:0000955!2.19e-15!69;UBERON:0006238!2.19e-15!69;UBERON:0003075!1.07e-14!86;UBERON:0007284!1.07e-14!86;UBERON:0002346!4.09e-13!90;UBERON:0000153!1.44e-12!129;UBERON:0007811!1.44e-12!129;UBERON:0000033!2.33e-12!123;UBERON:0002780!1.95e-09!41;UBERON:0001890!1.95e-09!41;UBERON:0006240!1.95e-09!41;UBERON:0003076!2.02e-09!15;UBERON:0003057!2.02e-09!15;UBERON:0004733!3.33e-09!12;UBERON:0002028!3.33e-09!12;UBERON:0007277!3.33e-09!12;UBERON:0003080!5.82e-09!42;UBERON:0004111!6.44e-09!241;UBERON:0004121!2.68e-08!169;UBERON:0004732!4.05e-08!13;UBERON:0000119!4.13e-08!312;UBERON:0000477!5.14e-08!286;UBERON:0001893!5.37e-08!34;UBERON:0002020!7.71e-08!34;UBERON:0003528!7.71e-08!34;UBERON:0003056!1.03e-07!61;UBERON:0000483!1.20e-07!309;UBERON:0000924!1.38e-07!173;UBERON:0006601!1.38e-07!173;UBERON:0002791!1.69e-07!33;UBERON:0001869!3.07e-07!32;UBERON:0000475!3.18e-07!365;UBERON:0000468!3.57e-07!659;UBERON:0002680!3.63e-07!9;UBERON:0001895!3.63e-07!9;UBERON:0010092!3.63e-07!9;UBERON:0000956!4.04e-07!25;UBERON:0000203!4.04e-07!25|ontology_enrichment_uberon_v019=UBERON:0004733;9.63e-15;12!UBERON:0002028;9.63e-15;12!UBERON:0004732;1.58e-13;13!UBERON:0002037;6.73e-11;6!UBERON:0002680;1.03e-10;9!UBERON:0001895;1.03e-10;9!UBERON:0000073;2.17e-07;53!UBERON:0002616;2.17e-07;53!UBERON:0001872;4.92e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0003076,4.42e-15,15;UBERON:0003057,4.42e-15,15;UBERON:0004733,1.07e-14,12;UBERON:0002028,1.07e-14,12;UBERON:0007277,1.07e-14,12;UBERON:0004732,1.74e-13,13;UBERON:0001049,5.39e-11,56;UBERON:0005068,5.39e-11,56;UBERON:0006241,5.39e-11,56;UBERON:0007135,5.39e-11,56;UBERON:0002037,6.97e-11,6;UBERON:0006215,6.97e-11,6;UBERON:0002680,1.45e-10,9;UBERON:0001895,1.45e-10,9;UBERON:0010092,1.45e-10,9;UBERON:0000073,4.37e-10,53;UBERON:0002616,4.37e-10,53;UBERON:0003075,8.90e-09,82;UBERON:0007284,8.90e-09,82;UBERON:0001017,9.95e-09,81;UBERON:0000955,2.46e-08,68;UBERON:0006238,2.46e-08,68;UBERON:0002346,3.35e-08,86;UBERON:0001016,1.64e-07,89;UBERON:0007023,5.13e-07,114;UBERON:0001872,6.72e-07,5|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0.123766352960047,0,0,0,0,0,0.861847406537515,0.204000691244253,1.25381888591235,1.14494394852423,0.136874425072884,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.722878304769133,2.00535164254356,0.434539556882471,0.795285947051099,0.973269740605272,0.283604451492204,0,0.263504357079378,0.261958150995425,0,0.370784442784429,0,0,0,0,0,0,0.39752481473341,0,0,0.56530794192401,0,0.825354125820202,0.208994966536811,0.258416759169329,0.71153252537342,0.33472061276467,1.61131726843659,0,2.68468263302986,0,0.81014194788176,0.535798369704479,0.44905874525234,0,0,0,0.183201743930407,0,0,0,0,0,0.397227542439656,0.286836620748814,0,1.12135520028461,0,0.49333509683432,0,0.404132016209064,0,0.908144565869588,0,0.234321431833797,0.312160076830321,0,0,0.117434498643765,0,0,0.204154171254893,0.122834317311768,0.206651562351531,0,0.247266929278557,0,0,0,0.250237039743928,0,0,0,0,0.340296549480063,0.179389635688862,0.213557388818567,0.423863802319124,0.300091096084402,0.206105058476878,0.515281080091258,0.37223371266318,0.506328996723799,0,0.504867548488229,0.0920498986422993,0.161646056818812,0,0.302256294682921,0,0.193260853163297,0,0,0.121973706129595,0.662648841607426,0.116193942869518,0.725627385107593,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,1.44366447761074,1.85194205030644,1.14152491340759,0.790204397959275,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,1.86595303986695,1.29707958075265,1.00993946741104,0.317489471460845,0.763976851116555,2.34434894420094,0,0.411309970813294,0,0.571652865261156,0.224262168690721,0.43596006883328,0.22001485746285,0.129271715757778,0,0,0,0,0,0,0.266422179016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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5413 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9164 | |||
|TSSclassifier=W | |||
|UniProt=Q99719 | |||
|association_with_transcript=-315bp_to_ENST00000455784,NM_002688,uc002zpv.1_5end | |||
|description=CAGE_peak_4_at_SEPT5_5end | |||
|id=chr22:19701639..19701671,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000097;4.92e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,5.10e-07,5;CL:0002028,5.10e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.05e-13;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.85e-17!86;UBERON:0001049!5.09e-16!57;UBERON:0005068!5.09e-16!57;UBERON:0006241!5.09e-16!57;UBERON:0007135!5.09e-16!57;UBERON:0007023!6.24e-16!115;UBERON:0001017!1.19e-15!82;UBERON:0002616!1.54e-15!59;UBERON:0000073!1.78e-15!94;UBERON:0001016!1.78e-15!94;UBERON:0000955!2.19e-15!69;UBERON:0006238!2.19e-15!69;UBERON:0003075!1.07e-14!86;UBERON:0007284!1.07e-14!86;UBERON:0002346!4.09e-13!90;UBERON:0000153!1.44e-12!129;UBERON:0007811!1.44e-12!129;UBERON:0000033!2.33e-12!123;UBERON:0002780!1.95e-09!41;UBERON:0001890!1.95e-09!41;UBERON:0006240!1.95e-09!41;UBERON:0003076!2.02e-09!15;UBERON:0003057!2.02e-09!15;UBERON:0004733!3.33e-09!12;UBERON:0002028!3.33e-09!12;UBERON:0007277!3.33e-09!12;UBERON:0003080!5.82e-09!42;UBERON:0004111!6.44e-09!241;UBERON:0004121!2.68e-08!169;UBERON:0004732!4.05e-08!13;UBERON:0000119!4.13e-08!312;UBERON:0000477!5.14e-08!286;UBERON:0001893!5.37e-08!34;UBERON:0002020!7.71e-08!34;UBERON:0003528!7.71e-08!34;UBERON:0003056!1.03e-07!61;UBERON:0000483!1.20e-07!309;UBERON:0000924!1.38e-07!173;UBERON:0006601!1.38e-07!173;UBERON:0002791!1.69e-07!33;UBERON:0001869!3.07e-07!32;UBERON:0000475!3.18e-07!365;UBERON:0000468!3.57e-07!659;UBERON:0002680!3.63e-07!9;UBERON:0001895!3.63e-07!9;UBERON:0010092!3.63e-07!9;UBERON:0000956!4.04e-07!25;UBERON:0000203!4.04e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0004733;9.63e-15;12!UBERON:0002028;9.63e-15;12!UBERON:0004732;1.58e-13;13!UBERON:0002037;6.73e-11;6!UBERON:0002680;1.03e-10;9!UBERON:0001895;1.03e-10;9!UBERON:0000073;2.17e-07;53!UBERON:0002616;2.17e-07;53!UBERON:0001872;4.92e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,4.42e-15,15;UBERON:0003057,4.42e-15,15;UBERON:0004733,1.07e-14,12;UBERON:0002028,1.07e-14,12;UBERON:0007277,1.07e-14,12;UBERON:0004732,1.74e-13,13;UBERON:0001049,5.39e-11,56;UBERON:0005068,5.39e-11,56;UBERON:0006241,5.39e-11,56;UBERON:0007135,5.39e-11,56;UBERON:0002037,6.97e-11,6;UBERON:0006215,6.97e-11,6;UBERON:0002680,1.45e-10,9;UBERON:0001895,1.45e-10,9;UBERON:0010092,1.45e-10,9;UBERON:0000073,4.37e-10,53;UBERON:0002616,4.37e-10,53;UBERON:0003075,8.90e-09,82;UBERON:0007284,8.90e-09,82;UBERON:0001017,9.95e-09,81;UBERON:0000955,2.46e-08,68;UBERON:0006238,2.46e-08,68;UBERON:0002346,3.35e-08,86;UBERON:0001016,1.64e-07,89;UBERON:0007023,5.13e-07,114;UBERON:0001872,6.72e-07,5 | |||
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| |||
|short_description=p4@SEPT5 | |||
}} |
Revision as of 10:59, 12 September 2013
Short description: | p4@SEPT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SEPT5_5end |
Coexpression cluster: | NA |
Association with transcript: | -315bp_to_ENST00000455784, NM_002688, uc002zpv.1_5end |
EntrezGene: | SEPT5 |
HGNC: | 9164 |
UniProt: | Q99719 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 5.10e-07 | 5 |
basophil mast progenitor cell | 5.10e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
posterior neural tube | 4.42e-15 | 15 |
chordal neural plate | 4.42e-15 | 15 |
segmental subdivision of hindbrain | 1.07e-14 | 12 |
hindbrain | 1.07e-14 | 12 |
presumptive hindbrain | 1.07e-14 | 12 |
segmental subdivision of nervous system | 1.74e-13 | 13 |
neural tube | 5.39e-11 | 56 |
neural rod | 5.39e-11 | 56 |
future spinal cord | 5.39e-11 | 56 |
neural keel | 5.39e-11 | 56 |
cerebellum | 6.97e-11 | 6 |
rhombic lip | 6.97e-11 | 6 |
regional part of metencephalon | 1.45e-10 | 9 |
metencephalon | 1.45e-10 | 9 |
future metencephalon | 1.45e-10 | 9 |
regional part of nervous system | 4.37e-10 | 53 |
regional part of brain | 4.37e-10 | 53 |
neural plate | 8.90e-09 | 82 |
presumptive neural plate | 8.90e-09 | 82 |
central nervous system | 9.95e-09 | 81 |
brain | 2.46e-08 | 68 |
future brain | 2.46e-08 | 68 |
neurectoderm | 3.35e-08 | 86 |
nervous system | 1.64e-07 | 89 |
adult organism | 5.13e-07 | 114 |
parietal lobe | 6.72e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.