FFCP PHASE1:Mm9::chr10:126817871..126817934,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=71750|HGNC=|UniProt=E9Q995|association_with_transcript=16bp_to_ENSMUST00000111628_5end|description=CAGE_peak_2_at_R3hdm2_5end|id=chr10:126817871..126817934,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!1.85e-12!114;UBERON:0004111!2.36e-12!122;UBERON:0002346!2.50e-12!71;UBERON:0003075!2.50e-12!71;UBERON:0007284!2.50e-12!71;UBERON:0000033!1.38e-11!63;UBERON:0003056!6.73e-11!49;UBERON:0001049!9.21e-10!52;UBERON:0005068!9.21e-10!52;UBERON:0006241!9.21e-10!52;UBERON:0007135!9.21e-10!52;UBERON:0004121!1.94e-09!102;UBERON:0000924!1.94e-09!102;UBERON:0006601!1.94e-09!102;UBERON:0000955!2.63e-09!50;UBERON:0006238!2.63e-09!50;UBERON:0002616!5.61e-09!49;UBERON:0003080!8.25e-09!40;UBERON:0002780!8.29e-09!39;UBERON:0001890!8.29e-09!39;UBERON:0006240!8.29e-09!39;UBERON:0001017!1.21e-08!73;UBERON:0005743!1.21e-08!73;UBERON:0000956!1.64e-08!21;UBERON:0001869!1.64e-08!21;UBERON:0000203!1.64e-08!21;UBERON:0000468!7.06e-08!333;UBERON:0000073!9.18e-08!75;UBERON:0001016!9.18e-08!75;UBERON:0002619!1.25e-07!17;UBERON:0002020!2.00e-07!34;UBERON:0002021!2.71e-07!10;UBERON:0000411!2.71e-07!10;UBERON:0001950!2.71e-07!10;UBERON:0000922!2.74e-07!328;UBERON:0002791!3.77e-07!29;UBERON:0003528!3.77e-07!29;UBERON:0001893!3.77e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.95e-18,92;UBERON:0000025,1.84e-12,114;UBERON:0004111,2.36e-12,122;UBERON:0002346,1.22e-11,64;UBERON:0003075,1.22e-11,64;UBERON:0007284,1.22e-11,64;UBERON:0003056,6.71e-11,49;UBERON:0001049,9.19e-10,52;UBERON:0005068,9.19e-10,52;UBERON:0006241,9.19e-10,52;UBERON:0007135,9.19e-10,52;UBERON:0000955,9.53e-10,47;UBERON:0006238,9.53e-10,47;UBERON:0010371,1.20e-09,73;UBERON:0002616,2.07e-09,46;UBERON:0000073,2.27e-09,54;UBERON:0003080,8.23e-09,40;UBERON:0002780,8.27e-09,39;UBERON:0001890,8.27e-09,39;UBERON:0006240,8.27e-09,39;UBERON:0004121,1.18e-08,95;UBERON:0000924,1.18e-08,95;UBERON:0006601,1.18e-08,95;UBERON:0001017,1.21e-08,73;UBERON:0000956,1.63e-08,21;UBERON:0001869,1.63e-08,21;UBERON:0000203,1.63e-08,21;UBERON:0001016,9.17e-08,75;UBERON:0002619,1.24e-07,17;UBERON:0002020,2.00e-07,34;UBERON:0002021,2.71e-07,10;UBERON:0000411,2.71e-07,10;UBERON:0001950,2.71e-07,10;UBERON:0003528,3.77e-07,29;UBERON:0002791,3.77e-07,29;UBERON:0001893,3.77e-07,29|phase1_expression=6.56610273129655,4.53668029931169,6.82498859084304,5.14189159221611,4.00716583957078,1.6787927191189,3.27057696833736,1.80772652818207,2.67498572088167,2.34064526321993,2.56826952338257,1.59544317990673,0.513602189793617,1.39872643870396,0.999329285446988,1.21485160433896,0,1.89277299214943,1.64537320326887,1.69755860719212,4.76242424845991,5.16312946244604,2.61199789138935,2.07990149631429,2.52350209173887,2.29692785646008,0.86152399231815,1.939241094173,1.14014051673824,3.2763916868791,1.10865255327652,0,0.61506478758457,15.8481681015439,1.44425809875637,1.16364251750945,0.816677425049476,0.418531630736908,1.5626706890476,0.523523743973798,1.17646297606203,0.683045484958446,0.485510353031154,3.02152363141385,6.38674666682942,4.77221555620372,10.1710874765245,5.66865406589161,6.15121311656521,7.19390626574849,5.45947044338914,5.75010257459886,1.17447824240415,0.725362142011344,2.01656279485478,2.31533492432352,4.01146815914259,3.6097046459421,7.68802551266472,6.34789175126439,5.07065122804943,3.38844532069132,5.33576877666684,1.3498495759221,0.988866362566974,4.2628806896766,2.39680088414724,5.76327457982332,9.64313394468842,8.23536223823313,8.2026734927039,9.99778445413313,5.30084498283872,8.94182834269164,8.05101956553185,8.27296907949019,3.30347642998166,9.44886301830389,5.83704826373725,7.25374582516066,8.23388792421687,6.77187381723788,5.862842979029,2.8138130501584,5.65353516774197,5.59794312399969,8.68467252874528,9.87917062874093,2.04460721999597,2.87171928405785,6.95674772884027,5.16254326188832,3.39985666853875,2.69851595818909,7.14754059192436,10.7526452903361,5.33688796500657,6.13549161281008,3.37721805983729,5.3000936176551,5.35204995151386,6.41632387071589,5.09610479413291,0,1.73192832808971,1.52015919285059,2.02209778005913,4.79572294820052,8.02707439306232,7.42210695324124,8.32729568477452,4.87144765299426,8.07154240396205,5.72746034099966,10.2302175208063,11.0586600370114,5.43828929015623,8.38676270135488,0.884610551949874,8.25010934731787,4.19598885074748,4.84875253135222,0,10.2473278954042,9.84399522023239,2.55457055208591,2.87556298814209,1.79970819298022,1.65191295194984,7.18995069143149,5.03250663100489,12.5654352112864,10.9509321721134,15.0872119824895,8.10373373782284,8.76102820565891,12.220723662038,6.22034853050465,2.52722758433675,8.20723237957248,13.4024056251585,7.35686734187113,9.00310649026746,8.43946979880004,10.5456573684558,8.96796041993949,7.77724313845749,8.53721123438752,10.5628316537093,16.8304411349359,16.7153567955751,9.64461222681329,14.1804097105055,7.3132954969655,6.99659263787008,8.55847347319521,1.40442637462647,1.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| ||
|EntrezGene=71750 | |||
|HGNC= | |||
|UniProt=E9Q995 | |||
|association_with_transcript=16bp_to_ENSMUST00000111628_5end | |||
|description=CAGE_peak_2_at_R3hdm2_5end | |||
|id=chr10:126817871..126817934,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!1.85e-12!114;UBERON:0004111!2.36e-12!122;UBERON:0002346!2.50e-12!71;UBERON:0003075!2.50e-12!71;UBERON:0007284!2.50e-12!71;UBERON:0000033!1.38e-11!63;UBERON:0003056!6.73e-11!49;UBERON:0001049!9.21e-10!52;UBERON:0005068!9.21e-10!52;UBERON:0006241!9.21e-10!52;UBERON:0007135!9.21e-10!52;UBERON:0004121!1.94e-09!102;UBERON:0000924!1.94e-09!102;UBERON:0006601!1.94e-09!102;UBERON:0000955!2.63e-09!50;UBERON:0006238!2.63e-09!50;UBERON:0002616!5.61e-09!49;UBERON:0003080!8.25e-09!40;UBERON:0002780!8.29e-09!39;UBERON:0001890!8.29e-09!39;UBERON:0006240!8.29e-09!39;UBERON:0001017!1.21e-08!73;UBERON:0005743!1.21e-08!73;UBERON:0000956!1.64e-08!21;UBERON:0001869!1.64e-08!21;UBERON:0000203!1.64e-08!21;UBERON:0000468!7.06e-08!333;UBERON:0000073!9.18e-08!75;UBERON:0001016!9.18e-08!75;UBERON:0002619!1.25e-07!17;UBERON:0002020!2.00e-07!34;UBERON:0002021!2.71e-07!10;UBERON:0000411!2.71e-07!10;UBERON:0001950!2.71e-07!10;UBERON:0000922!2.74e-07!328;UBERON:0002791!3.77e-07!29;UBERON:0003528!3.77e-07!29;UBERON:0001893!3.77e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.95e-18,92;UBERON:0000025,1.84e-12,114;UBERON:0004111,2.36e-12,122;UBERON:0002346,1.22e-11,64;UBERON:0003075,1.22e-11,64;UBERON:0007284,1.22e-11,64;UBERON:0003056,6.71e-11,49;UBERON:0001049,9.19e-10,52;UBERON:0005068,9.19e-10,52;UBERON:0006241,9.19e-10,52;UBERON:0007135,9.19e-10,52;UBERON:0000955,9.53e-10,47;UBERON:0006238,9.53e-10,47;UBERON:0010371,1.20e-09,73;UBERON:0002616,2.07e-09,46;UBERON:0000073,2.27e-09,54;UBERON:0003080,8.23e-09,40;UBERON:0002780,8.27e-09,39;UBERON:0001890,8.27e-09,39;UBERON:0006240,8.27e-09,39;UBERON:0004121,1.18e-08,95;UBERON:0000924,1.18e-08,95;UBERON:0006601,1.18e-08,95;UBERON:0001017,1.21e-08,73;UBERON:0000956,1.63e-08,21;UBERON:0001869,1.63e-08,21;UBERON:0000203,1.63e-08,21;UBERON:0001016,9.17e-08,75;UBERON:0002619,1.24e-07,17;UBERON:0002020,2.00e-07,34;UBERON:0002021,2.71e-07,10;UBERON:0000411,2.71e-07,10;UBERON:0001950,2.71e-07,10;UBERON:0003528,3.77e-07,29;UBERON:0002791,3.77e-07,29;UBERON:0001893,3.77e-07,29 | |||
|phase1_expression=6.56610273129655,4.53668029931169,6.82498859084304,5.14189159221611,4.00716583957078,1.6787927191189,3.27057696833736,1.80772652818207,2.67498572088167,2.34064526321993,2.56826952338257,1.59544317990673,0.513602189793617,1.39872643870396,0.999329285446988,1.21485160433896,0,1.89277299214943,1.64537320326887,1.69755860719212,4.76242424845991,5.16312946244604,2.61199789138935,2.07990149631429,2.52350209173887,2.29692785646008,0.86152399231815,1.939241094173,1.14014051673824,3.2763916868791,1.10865255327652,0,0.61506478758457,15.8481681015439,1.44425809875637,1.16364251750945,0.816677425049476,0.418531630736908,1.5626706890476,0.523523743973798,1.17646297606203,0.683045484958446,0.485510353031154,3.02152363141385,6.38674666682942,4.77221555620372,10.1710874765245,5.66865406589161,6.15121311656521,7.19390626574849,5.45947044338914,5.75010257459886,1.17447824240415,0.725362142011344,2.01656279485478,2.31533492432352,4.01146815914259,3.6097046459421,7.68802551266472,6.34789175126439,5.07065122804943,3.38844532069132,5.33576877666684,1.3498495759221,0.988866362566974,4.2628806896766,2.39680088414724,5.76327457982332,9.64313394468842,8.23536223823313,8.2026734927039,9.99778445413313,5.30084498283872,8.94182834269164,8.05101956553185,8.27296907949019,3.30347642998166,9.44886301830389,5.83704826373725,7.25374582516066,8.23388792421687,6.77187381723788,5.862842979029,2.8138130501584,5.65353516774197,5.59794312399969,8.68467252874528,9.87917062874093,2.04460721999597,2.87171928405785,6.95674772884027,5.16254326188832,3.39985666853875,2.69851595818909,7.14754059192436,10.7526452903361,5.33688796500657,6.13549161281008,3.37721805983729,5.3000936176551,5.35204995151386,6.41632387071589,5.09610479413291,0,1.73192832808971,1.52015919285059,2.02209778005913,4.79572294820052,8.02707439306232,7.42210695324124,8.32729568477452,4.87144765299426,8.07154240396205,5.72746034099966,10.2302175208063,11.0586600370114,5.43828929015623,8.38676270135488,0.884610551949874,8.25010934731787,4.19598885074748,4.84875253135222,0,10.2473278954042,9.84399522023239,2.55457055208591,2.87556298814209,1.79970819298022,1.65191295194984,7.18995069143149,5.03250663100489,12.5654352112864,10.9509321721134,15.0872119824895,8.10373373782284,8.76102820565891,12.220723662038,6.22034853050465,2.52722758433675,8.20723237957248,13.4024056251585,7.35686734187113,9.00310649026746,8.43946979880004,10.5456573684558,8.96796041993949,7.77724313845749,8.53721123438752,10.5628316537093,16.8304411349359,16.7153567955751,9.64461222681329,14.1804097105055,7.3132954969655,6.99659263787008,8.55847347319521,1.40442637462647,1.28673953557358,1.70498099637356,15.9486844852336,10.0846205791871,12.064158117888,13.494449928357,12.5929108318338,13.884040159864,12.556833016522,11.5357562601836,12.37712629092,17.114224391002,12.6408947340903,16.294830718717,11.1111990443253,14.7098577245004,11.4075455946316,9.46304768538573,11.216602749342,4.62586296177317,0.528901133327089,12.1574302805083,12.0763069367428,7.47431275668141,6.85723983719365,5.78182913996663,5.1360919050391,4.74529061544512,4.28217282282428,5.02670417600539,5.96869416123452,5.06906626509712,6.29173586057955,4.75503709724327,4.77939055810481,6.63837653335786,7.65465034485183,6.76246414038483,9.9789150644204,7.95205197387266,8.90724912607046,8.66340558602325,7.0852871030209,8.00693511991011,8.51440431060424,6.52195779591728,4.50481785433454,6.6830058338489,3.82265591054251,3.85434230638156,4.82354319504834,3.8193877767213,4.31544206176216,6.48540907100142,3.84385978463314,11.5014565221884,7.44281895337007,8.42501717409313,10.8608917517258,11.1226396383586,10.6137574699941,4.61882975416512,9.85355341206521,8.31121379854332,7.80827394565865,9.15291968325158,4.85768146581266,4.04674189506223,4.29294025287157,8.6699329258405,7.75126413770712,8.77001227616179,5.57135270033509,5.52591941970866,3.18227928879325,1.50791283939272,0.54390568381871,1.96705709207614,4.96686143348518,5.77982123956051,6.91548950893999,3.44263385291018,11.8661335786055,5.36363973007636,5.46614242015294,8.61693590931196,7.40803273652911,5.56996685205985,9.05844898524264,10.1202675418724,6.42962887404886,6.7198922250909,9.96096080907602,8.37446502728785,10.6839362200353,10.0989914799217,6.10389454998381,6.63725691699814,8.01176099311439,7.55808892411878,5.65815239267694,7.38254732201932,9.53048958626175,5.68542244970086,8.72480950746013,9.62542921638748,6.95280867458795,6.32511651449993,8.25084345985495,5.44703369206061,12.2441543941291,12.2890749593617,9.00215547132688,9.93105308396732,10.3453914209201,7.73380396829969,5.17590413494819,3.52007562095566,3.1774810629573,5.73373834942901,7.25499512942512,7.26589920131575,5.79004079310296,4.65552141612232,3.44695889464629,6.70405924248657,6.86073617438886,3.07567585436135,6.81076664278634,3.88908507476395,2.44878994106098,2.32380187125743,1.37266903923914,5.60928818979723,4.47844647435706,5.66619892598138,1.90934123603023,12.811607740036,10.1659733563424,7.56037385752609,8.781708432607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| |||
|short_description=p2@R3hdm2 | |||
}} |
Revision as of 16:02, 12 September 2013
Short description: | p2@R3hdm2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_R3hdm2_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_ENSMUST00000111628_5end |
EntrezGene: | R3hdm2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.