FFCP PHASE1:Mm9::chr10:80693518..80693570,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16467|HGNC=|MCL_coexpression_id=13|UniProt=D6RIJ5,Q8BHE3|association_with_transcript=0bp_to_ENSMUST00000146030,NM_178662,uc007ggo.1_5end|description=CAGE_peak_1_at_Atcay_5end|id=chr10:80693518..80693570,-|ontology_enrichment_celltype=CL:0000540!1.03e-16!33;CL:0000047!1.03e-16!33;CL:0000031!1.03e-16!33;CL:0000404!1.03e-16!33;CL:0000117!8.31e-16!23;CL:0000337!8.31e-16!23;CL:0000221!2.85e-15!44;CL:0000133!2.85e-15!44;CL:0002319!3.28e-15!43;CL:0000393!3.01e-11!39;CL:0000211!3.01e-11!39;CL:0000055!3.44e-10!50|ontology_enrichment_celltype_v019_2=CL:0000540,3.87e-20,33;CL:0000047,3.87e-20,33;CL:0000031,3.87e-20,33;CL:0000404,3.87e-20,33;CL:0000117,5.02e-19,23;CL:0000337,5.02e-19,23;CL:0000221,3.21e-15,44;CL:0000133,3.21e-15,44;CL:0002319,4.02e-15,43;CL:0000393,6.92e-15,39;CL:0000211,6.92e-15,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.67e-33!73;UBERON:0005743!3.67e-33!73;UBERON:0000073!6.11e-33!75;UBERON:0001016!6.11e-33!75;UBERON:0004121!2.00e-30!102;UBERON:0000924!2.00e-30!102;UBERON:0006601!2.00e-30!102;UBERON:0002346!1.85e-29!71;UBERON:0003075!1.85e-29!71;UBERON:0007284!1.85e-29!71;UBERON:0000033!1.83e-25!63;UBERON:0001049!5.08e-25!52;UBERON:0005068!5.08e-25!52;UBERON:0006241!5.08e-25!52;UBERON:0007135!5.08e-25!52;UBERON:0000955!8.12e-24!50;UBERON:0006238!8.12e-24!50;UBERON:0002616!5.22e-23!49;UBERON:0003056!1.81e-22!49;UBERON:0003080!7.51e-20!40;UBERON:0002020!1.74e-19!34;UBERON:0002780!3.92e-19!39;UBERON:0001890!3.92e-19!39;UBERON:0006240!3.92e-19!39;UBERON:0007811!4.23e-19!86;UBERON:0000153!2.04e-16!94;UBERON:0002791!4.38e-16!29;UBERON:0003528!4.38e-16!29;UBERON:0001893!4.38e-16!29;UBERON:0000956!9.47e-11!21;UBERON:0001869!9.47e-11!21;UBERON:0000203!9.47e-11!21;UBERON:0002619!1.53e-08!17;UBERON:0002021!5.54e-07!10;UBERON:0000411!5.54e-07!10;UBERON:0001950!5.54e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.93e-38,73;UBERON:0001016,3.72e-36,75;UBERON:0002346,3.88e-33,64;UBERON:0003075,3.88e-33,64;UBERON:0007284,3.88e-33,64;UBERON:0004121,8.24e-33,95;UBERON:0000924,8.24e-33,95;UBERON:0006601,8.24e-33,95;UBERON:0000073,1.23e-30,54;UBERON:0001049,1.05e-28,52;UBERON:0005068,1.05e-28,52;UBERON:0006241,1.05e-28,52;UBERON:0007135,1.05e-28,52;UBERON:0010371,1.15e-27,73;UBERON:0003056,4.02e-26,49;UBERON:0000955,1.21e-24,47;UBERON:0006238,1.21e-24,47;UBERON:0002616,1.09e-23,46;UBERON:0003080,6.92e-23,40;UBERON:0002020,2.28e-22,34;UBERON:0002780,5.13e-22,39;UBERON:0001890,5.13e-22,39;UBERON:0006240,5.13e-22,39;UBERON:0010314,3.72e-21,92;UBERON:0003528,3.10e-18,29;UBERON:0002791,3.10e-18,29;UBERON:0001893,3.10e-18,29;UBERON:0000956,8.80e-12,21;UBERON:0001869,8.80e-12,21;UBERON:0000203,8.80e-12,21;UBERON:0002619,4.07e-09,17;UBERON:0002021,3.26e-08,10;UBERON:0000411,3.26e-08,10;UBERON:0001950,3.26e-08,10;UBERON:0002420,7.21e-08,8;UBERON:0007245,7.21e-08,8;UBERON:0010009,7.21e-08,8;UBERON:0010011,7.21e-08,8;UBERON:0000454,7.21e-08,8|phase1_expression=2.88267924788629,0,0,0,0,0,0,3.87369970324729,0.140788722151667,0,0.171217968225505,0.478632953972018,0.171200729931206,1.04904482902797,0,0,0,0.315462165358238,0,0,13.9470995847754,0,0,0.47997726838022,0.22940928106717,0,0,0,0,0.504060259519861,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0.439372365468944,0.194429899074283,0.55994568650145,1.43752564364972,0,0.725362142011344,0,0,0,0,73.440875292034,96.27635822751,75.4259370172353,0,0,0,0,0,10.1864037576258,9.22123932771731,45.0012917418793,67.232957289182,46.271491497304,70.5557931477395,90.5561017901615,47.5264300954022,53.0025454730847,45.041720543891,74.8787990795843,68.8234752279162,78.1857254274279,90.2102208074526,89.0174772251446,67.197824801822,83.1965337024115,82.726103674657,78.3855011095036,75.1302892957853,67.3418050179757,66.9174010512829,0.530083353332288,0.982430281388212,0,0,0,0,0,0,2.24711072210803,0,0,0,1.54927761754349,0,0,0,0,0,0,1.7127581957859,2.33044095282455,1.63286352971307,4.68410382268567,3.34912026143355,2.30615497256059,4.22023393547343,4.8211369925639,0.879666139307728,0,0,0,0.161766849947409,0,0,0,44.7954619427667,40.2137677081834,0,0,0,0,75.9438541782451,51.6975681185048,70.2407828310912,81.1759575297931,73.1346207964745,67.1155383927379,59.3803022827993,0.305518091550949,0,0,3.15662783829711,1.95180664444056,8.73627996847197,8.46292010085141,9.19299388797862,8.300452896462,11.914575986491,11.6190138454064,12.9351685369508,0,0,0.175951124163949,0,0,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0.414251545071004,0.234526059981096,0.36012412292203,0.23674473558521,0.787056926989615,0.154267112887378,0,0.268273401399619,0.116765342367169,0.16455984991348,0.32833492815819,0.162137619091711,0,0,0.268412837520744,58.2503157522632,56.803346033365,0.991256348951394,0.528901133327089,0,1.16118335930219,1.15980715189884,0.80673409849337,1.11189021922435,0.570676878337677,0.474529061544512,0.658795818896044,0.754005626400808,1.39269530428806,0.779856348476481,0.8988194086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| ||
|EntrezGene=16467 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt=D6RIJ5,Q8BHE3 | |||
|association_with_transcript=0bp_to_ENSMUST00000146030,NM_178662,uc007ggo.1_5end | |||
|description=CAGE_peak_1_at_Atcay_5end | |||
|id=chr10:80693518..80693570,- | |||
|ontology_enrichment_celltype=CL:0000540!1.03e-16!33;CL:0000047!1.03e-16!33;CL:0000031!1.03e-16!33;CL:0000404!1.03e-16!33;CL:0000117!8.31e-16!23;CL:0000337!8.31e-16!23;CL:0000221!2.85e-15!44;CL:0000133!2.85e-15!44;CL:0002319!3.28e-15!43;CL:0000393!3.01e-11!39;CL:0000211!3.01e-11!39;CL:0000055!3.44e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.87e-20,33;CL:0000047,3.87e-20,33;CL:0000031,3.87e-20,33;CL:0000404,3.87e-20,33;CL:0000117,5.02e-19,23;CL:0000337,5.02e-19,23;CL:0000221,3.21e-15,44;CL:0000133,3.21e-15,44;CL:0002319,4.02e-15,43;CL:0000393,6.92e-15,39;CL:0000211,6.92e-15,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.67e-33!73;UBERON:0005743!3.67e-33!73;UBERON:0000073!6.11e-33!75;UBERON:0001016!6.11e-33!75;UBERON:0004121!2.00e-30!102;UBERON:0000924!2.00e-30!102;UBERON:0006601!2.00e-30!102;UBERON:0002346!1.85e-29!71;UBERON:0003075!1.85e-29!71;UBERON:0007284!1.85e-29!71;UBERON:0000033!1.83e-25!63;UBERON:0001049!5.08e-25!52;UBERON:0005068!5.08e-25!52;UBERON:0006241!5.08e-25!52;UBERON:0007135!5.08e-25!52;UBERON:0000955!8.12e-24!50;UBERON:0006238!8.12e-24!50;UBERON:0002616!5.22e-23!49;UBERON:0003056!1.81e-22!49;UBERON:0003080!7.51e-20!40;UBERON:0002020!1.74e-19!34;UBERON:0002780!3.92e-19!39;UBERON:0001890!3.92e-19!39;UBERON:0006240!3.92e-19!39;UBERON:0007811!4.23e-19!86;UBERON:0000153!2.04e-16!94;UBERON:0002791!4.38e-16!29;UBERON:0003528!4.38e-16!29;UBERON:0001893!4.38e-16!29;UBERON:0000956!9.47e-11!21;UBERON:0001869!9.47e-11!21;UBERON:0000203!9.47e-11!21;UBERON:0002619!1.53e-08!17;UBERON:0002021!5.54e-07!10;UBERON:0000411!5.54e-07!10;UBERON:0001950!5.54e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.93e-38,73;UBERON:0001016,3.72e-36,75;UBERON:0002346,3.88e-33,64;UBERON:0003075,3.88e-33,64;UBERON:0007284,3.88e-33,64;UBERON:0004121,8.24e-33,95;UBERON:0000924,8.24e-33,95;UBERON:0006601,8.24e-33,95;UBERON:0000073,1.23e-30,54;UBERON:0001049,1.05e-28,52;UBERON:0005068,1.05e-28,52;UBERON:0006241,1.05e-28,52;UBERON:0007135,1.05e-28,52;UBERON:0010371,1.15e-27,73;UBERON:0003056,4.02e-26,49;UBERON:0000955,1.21e-24,47;UBERON:0006238,1.21e-24,47;UBERON:0002616,1.09e-23,46;UBERON:0003080,6.92e-23,40;UBERON:0002020,2.28e-22,34;UBERON:0002780,5.13e-22,39;UBERON:0001890,5.13e-22,39;UBERON:0006240,5.13e-22,39;UBERON:0010314,3.72e-21,92;UBERON:0003528,3.10e-18,29;UBERON:0002791,3.10e-18,29;UBERON:0001893,3.10e-18,29;UBERON:0000956,8.80e-12,21;UBERON:0001869,8.80e-12,21;UBERON:0000203,8.80e-12,21;UBERON:0002619,4.07e-09,17;UBERON:0002021,3.26e-08,10;UBERON:0000411,3.26e-08,10;UBERON:0001950,3.26e-08,10;UBERON:0002420,7.21e-08,8;UBERON:0007245,7.21e-08,8;UBERON:0010009,7.21e-08,8;UBERON:0010011,7.21e-08,8;UBERON:0000454,7.21e-08,8 | |||
|phase1_expression=2.88267924788629,0,0,0,0,0,0,3.87369970324729,0.140788722151667,0,0.171217968225505,0.478632953972018,0.171200729931206,1.04904482902797,0,0,0,0.315462165358238,0,0,13.9470995847754,0,0,0.47997726838022,0.22940928106717,0,0,0,0,0.504060259519861,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0.439372365468944,0.194429899074283,0.55994568650145,1.43752564364972,0,0.725362142011344,0,0,0,0,73.440875292034,96.27635822751,75.4259370172353,0,0,0,0,0,10.1864037576258,9.22123932771731,45.0012917418793,67.232957289182,46.271491497304,70.5557931477395,90.5561017901615,47.5264300954022,53.0025454730847,45.041720543891,74.8787990795843,68.8234752279162,78.1857254274279,90.2102208074526,89.0174772251446,67.197824801822,83.1965337024115,82.726103674657,78.3855011095036,75.1302892957853,67.3418050179757,66.9174010512829,0.530083353332288,0.982430281388212,0,0,0,0,0,0,2.24711072210803,0,0,0,1.54927761754349,0,0,0,0,0,0,1.7127581957859,2.33044095282455,1.63286352971307,4.68410382268567,3.34912026143355,2.30615497256059,4.22023393547343,4.8211369925639,0.879666139307728,0,0,0,0.161766849947409,0,0,0,44.7954619427667,40.2137677081834,0,0,0,0,75.9438541782451,51.6975681185048,70.2407828310912,81.1759575297931,73.1346207964745,67.1155383927379,59.3803022827993,0.305518091550949,0,0,3.15662783829711,1.95180664444056,8.73627996847197,8.46292010085141,9.19299388797862,8.300452896462,11.914575986491,11.6190138454064,12.9351685369508,0,0,0.175951124163949,0,0,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0.414251545071004,0.234526059981096,0.36012412292203,0.23674473558521,0.787056926989615,0.154267112887378,0,0.268273401399619,0.116765342367169,0.16455984991348,0.32833492815819,0.162137619091711,0,0,0.268412837520744,58.2503157522632,56.803346033365,0.991256348951394,0.528901133327089,0,1.16118335930219,1.15980715189884,0.80673409849337,1.11189021922435,0.570676878337677,0.474529061544512,0.658795818896044,0.754005626400808,1.39269530428806,0.779856348476481,0.898819408654221,0.648414149624083,0.199141273254367,0,0.685491075658373,0,0.203651327845314,0.581857461502877,0.210407459670956,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.947457058852424,0.162964976442026,0,0,0,0,0,0,0,0.318909537314974,0,0.345369963731791,0,0,0,0,0,64.862438355068,65.5213328050416,0,0,7.2566890465739,5.85658116444958,7.97066571611356,1.19484398976276,3.34198011123591,4.52922449262132,6.8817819284732,9.35218745316198,6.7198922250909,100.894893356447,0,0.35613120733451,0.325773918707152,0,0,0,0,0.188605079755898,0,0,1.03371317267288,0,0,0,0,0,19.7454971337197,3.78128297465751,5.04498866752743,3.42939256050548,6.38424841112185,8.38333442729732,8.88564711251453,17.0500371504176,0,0,0.882113592219848,0,0,0.0603129249281559,0,0.164140899745061,0.291480836629851,58.2235448313,0.170870880797853,0,0,0.188368457004691,0.136694227721025,0,0,0,0,0,1.26534397432454,1.01659733563424,1.83609079397062,1.04544148007234,1.09181281873089,1.21377911746339,0.661227645802687,0.26175594198403,0.259229946583586,0,0,0.149516546043979,0,0,0.258319646955462,0,0,0.13020438484395,0.104859344425711,0,0,0.632022241256357,0.608175645870493,0,0,0.179026695667481,0.198681354781265,0.360586348559907,0.886137163047463,0.706765149637033,0.990688486514998,1.10908803650525,1.36441033035653,1.25075394132428,1.40252282617883,0.226730383615211,0,0,0.167884616364078,0.19318959403219,0,0,0.428736758158132,0,71.7234840123675,58.0009797999043,65.8829840455306,57.742669267479,77.4143247340826,64.9638751755142,57.3769125197035,66.1972168739604,58.4553707589624,57.9891549162038,5.50072942196136,16.7590446828433,12.4635532200518,8.75184181445858,10.2710449687711,11.7659845408009,8.88986911206461,9.47761263298913,9.94849549734627,10.1078884705519,8.87177549615839,9.80856975207596,9.27050923951836,10.3720746895888,9.13223956394251,13.3362233559261,7.76424983830532,8.87382414133043,11.5384052224926,10.3039244094078,8.57173130963539,7.27650805253284,9.53744759789284,8.86613141457204,9.41093804153306,7.44608549446753,6.95126296916536,7.3659519202596,11.1359373353607,8.41713407486608,7.82991119619549,7.68334962529395,10.2307760792422,8.98633678878603,7.33045121728337,23.9818154820428,8.18760629558929,9.45432637812513,4.01705497344571,2.20591419119516,2.08681052058379 | |||
|short_description=p1@Atcay | |||
}} |
Revision as of 17:42, 12 September 2013
Short description: | p1@Atcay |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Atcay_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000146030, NM_178662, uc007ggo.1_5end |
EntrezGene: | Atcay |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.87e-20 | 33 |
neuronal stem cell | 3.87e-20 | 33 |
neuroblast | 3.87e-20 | 33 |
electrically signaling cell | 3.87e-20 | 33 |
CNS neuron (sensu Vertebrata) | 5.02e-19 | 23 |
neuroblast (sensu Vertebrata) | 5.02e-19 | 23 |
ectodermal cell | 3.21e-15 | 44 |
neurectodermal cell | 3.21e-15 | 44 |
neural cell | 4.02e-15 | 43 |
electrically responsive cell | 6.92e-15 | 39 |
electrically active cell | 6.92e-15 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.