FFCP PHASE1:Mm9::chr11:42234787..42234823,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14401|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=0bp_to_ENSMUST00000143626_5end|description=CAGE_peak_2_at_Gabrb2_5end|id=chr11:42234787..42234823,+|ontology_enrichment_celltype=CL:0000117!1.58e-11!23;CL:0000337!1.58e-11!23;CL:0000540!1.50e-07!33;CL:0000047!1.50e-07!33;CL:0000031!1.50e-07!33;CL:0000404!1.50e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,3.12e-15,23;CL:0000337,3.12e-15,23;CL:0000540,2.45e-08,33;CL:0000047,2.45e-08,33;CL:0000031,2.45e-08,33;CL:0000404,2.45e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.63e-20!63;UBERON:0000955!3.86e-20!50;UBERON:0006238!3.86e-20!50;UBERON:0001049!6.84e-20!52;UBERON:0005068!6.84e-20!52;UBERON:0006241!6.84e-20!52;UBERON:0007135!6.84e-20!52;UBERON:0002616!1.82e-19!49;UBERON:0002346!3.11e-19!71;UBERON:0003075!3.11e-19!71;UBERON:0007284!3.11e-19!71;UBERON:0002020!2.79e-18!34;UBERON:0003056!5.36e-18!49;UBERON:0001017!1.26e-17!73;UBERON:0005743!1.26e-17!73;UBERON:0003080!2.01e-16!40;UBERON:0000073!2.10e-16!75;UBERON:0001016!2.10e-16!75;UBERON:0002791!2.66e-16!29;UBERON:0003528!2.66e-16!29;UBERON:0001893!2.66e-16!29;UBERON:0002780!1.17e-15!39;UBERON:0001890!1.17e-15!39;UBERON:0006240!1.17e-15!39;UBERON:0004121!1.83e-14!102;UBERON:0000924!1.83e-14!102;UBERON:0006601!1.83e-14!102;UBERON:0000956!1.59e-11!21;UBERON:0001869!1.59e-11!21;UBERON:0000203!1.59e-11!21;UBERON:0002619!3.22e-10!17;UBERON:0007811!1.17e-09!86;UBERON:0000153!6.20e-09!94;UBERON:0002021!1.60e-08!10;UBERON:0000411!1.60e-08!10;UBERON:0001950!1.60e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.33e-25,54;UBERON:0002020,1.12e-23,34;UBERON:0001049,2.74e-23,52;UBERON:0005068,2.74e-23,52;UBERON:0006241,2.74e-23,52;UBERON:0007135,2.74e-23,52;UBERON:0002346,7.48e-22,64;UBERON:0003075,7.48e-22,64;UBERON:0007284,7.48e-22,64;UBERON:0003528,5.96e-21,29;UBERON:0002791,5.96e-21,29;UBERON:0001893,5.96e-21,29;UBERON:0000955,1.03e-20,47;UBERON:0006238,1.03e-20,47;UBERON:0001017,3.24e-20,73;UBERON:0002616,7.50e-20,46;UBERON:0001016,3.34e-19,75;UBERON:0003056,2.99e-18,49;UBERON:0003080,6.86e-18,40;UBERON:0010371,8.08e-18,73;UBERON:0002780,6.60e-17,39;UBERON:0001890,6.60e-17,39;UBERON:0006240,6.60e-17,39;UBERON:0004121,1.82e-16,95;UBERON:0000924,1.82e-16,95;UBERON:0006601,1.82e-16,95;UBERON:0000956,1.99e-14,21;UBERON:0001869,1.99e-14,21;UBERON:0000203,1.99e-14,21;UBERON:0002619,1.29e-12,17;UBERON:0002021,4.11e-11,10;UBERON:0000411,4.11e-11,10;UBERON:0001950,4.11e-11,10;UBERON:0010314,7.87e-11,92;UBERON:0002420,9.89e-08,8;UBERON:0007245,9.89e-08,8;UBERON:0010009,9.89e-08,8;UBERON:0010011,9.89e-08,8;UBERON:0000454,9.89e-08,8|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.41928572495591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,1.1665793944457,0,0,0,0,0,0,0,0,6.27181028664753,7.93486468908049,2.53532561402472,0,0,0,0,0,0,0,1.8664130215526,1.35005938331691,1.89292465216244,1.71390590642282,1.54607978666129,2.81728838194394,1.72521847832825,1.83843757322004,27.5289702498472,42.2645089061971,45.4675338438481,3.69281605644543,6.40413505216868,7.8137005583514,8.37548997004143,11.8180148106653,16.3494125121187,5.00868595305235,5.69486723196412,3.16879057903011,0,0,0,0,0,0,0,0,1.68533304158102,0,0,0,1.12674735821344,0,0,0,0,0,0,0.68510327831436,0,0,0.693941307064543,0.608930956624282,0.461230994512117,0.150722640552623,0.470354828542819,0,0,0.144599356919912,0,0.161766849947409,0.441683036920787,0.969750506270444,0,40.110969190582,41.2610012422507,0,0,0,0,56.7706523344278,23.33253074375,14.0732874366408,44.1513773288382,47.3073596061111,54.6482557191643,37.3154905055843,1.32391173005411,0.497627882440372,0,0.841767423545896,1.82168620147785,0.229902104433473,0.360124259610698,1.20563854268572,1.2246569847239,1.40925092313335,2.34254311399322,6.46758426847539,0,0.189106080167819,0.703804496655795,0.43839146485515,0.556094498451196,0,0.61734640922383,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0.787056926989615,0.308534225774757,0.232533944750408,0.268273401399619,0.233530684734339,0,0,0,0,0,0.134206418760372,26.49653351908,12.3485534855141,0,0,0.426576501070468,0.696710015581316,1.54640953586512,1.00841762311671,0.667134131534611,0.190225626112559,0,0.658795818896044,0.502670417600539,0.596869416123452,0.779856348476481,0,0,0,0,0.342745537829186,0,0.203651327845314,0,0.210407459670956,0.442655759869801,0,0,0,0,0,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.488894929326078,0.509235257325564,0,0.167506257441816,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,10.9174401191699,10.5490517932983,0,0.504941854408746,0.315508219416257,0.390438744296638,0,0,0,0,0.809621403349789,0.292255857911312,0,26.3483479465882,0.99358059645788,1.24645922567079,2.28041743095006,0.824850614862677,0,1.69946445308487,0.302323556964751,0.377210159511796,0,0.307435147943927,0,0.727067458955011,1.06949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| ||
|EntrezGene=14401 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000143626_5end | |||
|description=CAGE_peak_2_at_Gabrb2_5end | |||
|id=chr11:42234787..42234823,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.58e-11!23;CL:0000337!1.58e-11!23;CL:0000540!1.50e-07!33;CL:0000047!1.50e-07!33;CL:0000031!1.50e-07!33;CL:0000404!1.50e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.12e-15,23;CL:0000337,3.12e-15,23;CL:0000540,2.45e-08,33;CL:0000047,2.45e-08,33;CL:0000031,2.45e-08,33;CL:0000404,2.45e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.63e-20!63;UBERON:0000955!3.86e-20!50;UBERON:0006238!3.86e-20!50;UBERON:0001049!6.84e-20!52;UBERON:0005068!6.84e-20!52;UBERON:0006241!6.84e-20!52;UBERON:0007135!6.84e-20!52;UBERON:0002616!1.82e-19!49;UBERON:0002346!3.11e-19!71;UBERON:0003075!3.11e-19!71;UBERON:0007284!3.11e-19!71;UBERON:0002020!2.79e-18!34;UBERON:0003056!5.36e-18!49;UBERON:0001017!1.26e-17!73;UBERON:0005743!1.26e-17!73;UBERON:0003080!2.01e-16!40;UBERON:0000073!2.10e-16!75;UBERON:0001016!2.10e-16!75;UBERON:0002791!2.66e-16!29;UBERON:0003528!2.66e-16!29;UBERON:0001893!2.66e-16!29;UBERON:0002780!1.17e-15!39;UBERON:0001890!1.17e-15!39;UBERON:0006240!1.17e-15!39;UBERON:0004121!1.83e-14!102;UBERON:0000924!1.83e-14!102;UBERON:0006601!1.83e-14!102;UBERON:0000956!1.59e-11!21;UBERON:0001869!1.59e-11!21;UBERON:0000203!1.59e-11!21;UBERON:0002619!3.22e-10!17;UBERON:0007811!1.17e-09!86;UBERON:0000153!6.20e-09!94;UBERON:0002021!1.60e-08!10;UBERON:0000411!1.60e-08!10;UBERON:0001950!1.60e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.33e-25,54;UBERON:0002020,1.12e-23,34;UBERON:0001049,2.74e-23,52;UBERON:0005068,2.74e-23,52;UBERON:0006241,2.74e-23,52;UBERON:0007135,2.74e-23,52;UBERON:0002346,7.48e-22,64;UBERON:0003075,7.48e-22,64;UBERON:0007284,7.48e-22,64;UBERON:0003528,5.96e-21,29;UBERON:0002791,5.96e-21,29;UBERON:0001893,5.96e-21,29;UBERON:0000955,1.03e-20,47;UBERON:0006238,1.03e-20,47;UBERON:0001017,3.24e-20,73;UBERON:0002616,7.50e-20,46;UBERON:0001016,3.34e-19,75;UBERON:0003056,2.99e-18,49;UBERON:0003080,6.86e-18,40;UBERON:0010371,8.08e-18,73;UBERON:0002780,6.60e-17,39;UBERON:0001890,6.60e-17,39;UBERON:0006240,6.60e-17,39;UBERON:0004121,1.82e-16,95;UBERON:0000924,1.82e-16,95;UBERON:0006601,1.82e-16,95;UBERON:0000956,1.99e-14,21;UBERON:0001869,1.99e-14,21;UBERON:0000203,1.99e-14,21;UBERON:0002619,1.29e-12,17;UBERON:0002021,4.11e-11,10;UBERON:0000411,4.11e-11,10;UBERON:0001950,4.11e-11,10;UBERON:0010314,7.87e-11,92;UBERON:0002420,9.89e-08,8;UBERON:0007245,9.89e-08,8;UBERON:0010009,9.89e-08,8;UBERON:0010011,9.89e-08,8;UBERON:0000454,9.89e-08,8 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.41928572495591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,1.1665793944457,0,0,0,0,0,0,0,0,6.27181028664753,7.93486468908049,2.53532561402472,0,0,0,0,0,0,0,1.8664130215526,1.35005938331691,1.89292465216244,1.71390590642282,1.54607978666129,2.81728838194394,1.72521847832825,1.83843757322004,27.5289702498472,42.2645089061971,45.4675338438481,3.69281605644543,6.40413505216868,7.8137005583514,8.37548997004143,11.8180148106653,16.3494125121187,5.00868595305235,5.69486723196412,3.16879057903011,0,0,0,0,0,0,0,0,1.68533304158102,0,0,0,1.12674735821344,0,0,0,0,0,0,0.68510327831436,0,0,0.693941307064543,0.608930956624282,0.461230994512117,0.150722640552623,0.470354828542819,0,0,0.144599356919912,0,0.161766849947409,0.441683036920787,0.969750506270444,0,40.110969190582,41.2610012422507,0,0,0,0,56.7706523344278,23.33253074375,14.0732874366408,44.1513773288382,47.3073596061111,54.6482557191643,37.3154905055843,1.32391173005411,0.497627882440372,0,0.841767423545896,1.82168620147785,0.229902104433473,0.360124259610698,1.20563854268572,1.2246569847239,1.40925092313335,2.34254311399322,6.46758426847539,0,0.189106080167819,0.703804496655795,0.43839146485515,0.556094498451196,0,0.61734640922383,0.398068533636986,0,0,0,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0.787056926989615,0.308534225774757,0.232533944750408,0.268273401399619,0.233530684734339,0,0,0,0,0,0.134206418760372,26.49653351908,12.3485534855141,0,0,0.426576501070468,0.696710015581316,1.54640953586512,1.00841762311671,0.667134131534611,0.190225626112559,0,0.658795818896044,0.502670417600539,0.596869416123452,0.779856348476481,0,0,0,0,0.342745537829186,0,0.203651327845314,0,0.210407459670956,0.442655759869801,0,0,0,0,0,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.488894929326078,0.509235257325564,0,0.167506257441816,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,10.9174401191699,10.5490517932983,0,0.504941854408746,0.315508219416257,0.390438744296638,0,0,0,0,0.809621403349789,0.292255857911312,0,26.3483479465882,0.99358059645788,1.24645922567079,2.28041743095006,0.824850614862677,0,1.69946445308487,0.302323556964751,0.377210159511796,0,0.307435147943927,0,0.727067458955011,1.06949213515416,0.948110273807448,0,0,1.36175842301515,0.540183282093931,0.129358683782755,0.214337035031592,0,0.178368817602071,0.493647061806363,0.608929898229199,0,0,0.220528398054962,0,0,0.482503399425247,0.238744688006273,0.492422699235184,0,2.59595422814714,0,0.206386867963223,0,0,0,0,0,0,0,0,1.73984796469624,3.25311147402958,3.02414954301044,2.71814784818809,1.74690050996942,2.02296519577231,2.14898984885873,1.57053565190418,0.259229946583586,0,0,0.299033092087958,0.330916980914195,2.52786544847262,3.7456348808542,7.7719817725758,6.57200536416222,1.3020438484395,0.209718688851422,0,0,0,0.202725215290164,0.205421914329655,0.25984164595559,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0.93841237725591,0.73260649706906,0,0,39.5326289831947,51.5564264888038,36.6653128601214,36.0891682921744,34.9392085083028,46.0790277407717,32.4010800111267,45.4824415256463,43.9548136714678,45.0451471224083,0.103787347584177,1.99512436700516,1.36586884603307,0.486213434136588,1.25767897576789,0.551530525350042,3.33370091702423,2.06035057238894,2.24643446714271,2.27427490587418,2.78827229879264,2.82939512079114,3.09016974650612,3.26528277264833,3.38869266838118,5.23923060411381,2.66533949673168,2.31491064556446,2.06042950401653,2.50238164228475,3.08582327146874,2.30718548007139,2.86123427936785,2.32554266611726,3.01150017329058,3.38458431566706,2.56099162021882,2.63069711437843,2.71608227691724,1.68342681497322,2.60997039873183,2.1670986122624,2.04615521584845,2.47898945897546,1.73615949883027,3.49734809113124,3.04111090979031,1.50409737833809,0.57386499620653,0.661774257358546,0.463735671240843 | |||
|short_description=p2@Gabrb2 | |||
}} |
Revision as of 19:39, 12 September 2013
Short description: | p2@Gabrb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gabrb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000143626_5end |
EntrezGene: | Gabrb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.12e-15 | 23 |
neuroblast (sensu Vertebrata) | 3.12e-15 | 23 |
neuron | 2.45e-08 | 33 |
neuronal stem cell | 2.45e-08 | 33 |
neuroblast | 2.45e-08 | 33 |
electrically signaling cell | 2.45e-08 | 33 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.