FFCP PHASE1:Mm9::chr11:63893049..63893076,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=40|UniProt=|association_with_transcript=-7bp_to_ENSMUST00000146333_5end|description=CAGE_peak_1_at_ENSMUST00000146333_5end|id=chr11:63893049..63893076,+|ontology_enrichment_celltype=CL:0000542!2.51e-08!13;CL:0000051!2.51e-08!13;CL:0000838!4.79e-08!12;CL:0000084!8.73e-08!11;CL:0000827!8.73e-08!11;CL:0000791!8.64e-07!9;CL:0000789!8.64e-07!9;CL:0002420!8.64e-07!9;CL:0002419!8.64e-07!9;CL:0000790!8.64e-07!9|ontology_enrichment_celltype_v019_2=CL:0000542,2.38e-08,13;CL:0000051,2.38e-08,13;CL:0000838,4.55e-08,12;CL:0000084,8.32e-08,11;CL:0000827,8.32e-08,11;CL:0000791,8.30e-07,9;CL:0000789,8.30e-07,9;CL:0002420,8.30e-07,9;CL:0002419,8.30e-07,9;CL:0000790,8.30e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!2.76e-11!29;UBERON:0003408!1.05e-10!24;UBERON:0002370!2.41e-10!23;UBERON:0000974!2.41e-10!23;UBERON:0004807!2.41e-10!23;UBERON:0005058!2.41e-10!23;UBERON:0003351!2.41e-10!23;UBERON:0009113!2.41e-10!23;UBERON:0003295!2.41e-10!23;UBERON:0009722!2.41e-10!23;UBERON:0005562!2.41e-10!23;UBERON:0007690!2.41e-10!23;UBERON:0003929!2.89e-10!55;UBERON:0006562!2.73e-09!24;UBERON:0001557!2.73e-09!24;UBERON:0001042!2.73e-09!24;UBERON:0008814!2.73e-09!24;UBERON:0009145!2.73e-09!24;UBERON:0005911!1.01e-08!69;UBERON:0005057!1.04e-08!51;UBERON:0002368!5.03e-08!60;UBERON:0000490!5.66e-08!66;UBERON:0002193!7.36e-08!48;UBERON:0002530!7.95e-08!65;UBERON:0002390!1.77e-07!45;UBERON:0003061!1.77e-07!45;UBERON:0001007!2.62e-07!128;UBERON:0001555!2.62e-07!128;UBERON:0007026!2.62e-07!128;UBERON:0004921!3.06e-07!126;UBERON:0004185!3.06e-07!126;UBERON:0002405!3.87e-07!70;UBERON:0004119!5.43e-07!130;UBERON:0000925!5.43e-07!130;UBERON:0006595!5.43e-07!130;UBERON:0000072!8.84e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.97e-11,29;UBERON:0005057,1.97e-11,29;UBERON:0003408,7.43e-11,24;UBERON:0002370,1.70e-10,23;UBERON:0000974,1.70e-10,23;UBERON:0004807,1.70e-10,23;UBERON:0005058,1.70e-10,23;UBERON:0003351,1.70e-10,23;UBERON:0009113,1.70e-10,23;UBERON:0003295,1.70e-10,23;UBERON:0009722,1.70e-10,23;UBERON:0005562,1.70e-10,23;UBERON:0007690,1.70e-10,23;UBERON:0003929,2.09e-10,55;UBERON:0000077,1.83e-09,35;UBERON:0006562,2.53e-09,24;UBERON:0001557,2.53e-09,24;UBERON:0001042,2.53e-09,24;UBERON:0008814,2.53e-09,24;UBERON:0009145,2.53e-09,24;UBERON:0001007,2.92e-09,116;UBERON:0001555,2.92e-09,116;UBERON:0007026,2.92e-09,116;UBERON:0004921,3.33e-09,114;UBERON:0004119,8.37e-09,118;UBERON:0000925,8.37e-09,118;UBERON:0006595,8.37e-09,118;UBERON:0005911,1.12e-08,69;UBERON:0002368,3.86e-08,60;UBERON:0002193,4.10e-08,48;UBERON:0002405,4.10e-08,48;UBERON:0000490,5.12e-08,66;UBERON:0002530,6.17e-08,65;UBERON:0002390,9.92e-08,45;UBERON:0003061,9.92e-08,45;UBERON:0007811,1.86e-07,36;UBERON:0000153,2.05e-07,43;UBERON:0000072,8.15e-07,27|phase1_expression=3.68342348341026,3.14077866875425,2.27499619694768,6.95667686005709,9.01612313903425,2.85394762250213,5.60670337429262,12.1375924035082,24.49723765439,20.8317428426574,8.21846247482424,4.54701306273417,67.6242883228263,41.0875891369288,3.66420737997229,3.44207954562704,1.39912375625629,12.4607555316504,10.5578113876419,6.79023442876848,1.61582251287033,7.74469419366905,11.2315909329742,2.55987876469451,2.98232065387321,2.29692785646008,3.4460959692726,2.37018355954478,2.28028103347649,1.76421090831952,1.77384408524244,1.27006134691926,0.61506478758457,0,12.1317680295535,10.805251948302,8.5751129630195,15.4856703372656,9.37602413428561,18.8468547830567,20.5881020810855,23.2235464885872,21.3624555333708,0.881277725829041,0.912392380975631,0.367093504323363,9.38869613217647,1.52617609466313,0.878744730937887,1.94429899074283,1.67983705950435,0,4.86569557567435,33.3666585325218,26.5514101322547,0.771778308107841,0.85960031981627,0,3.64169629547276,4.7609188134483,1.90149421051854,2.37191172448392,5.33576877666684,0.899899717281399,0,2.8419204597844,0,1.53687322128622,0.622137673850866,1.21505344498522,0.841299845405528,3.14216082844184,2.42955395046775,0.734944795289724,0.575072826109418,0,2.20231761998777,2.042997409363,1.53606533256243,1.71452174049252,1.46380229763855,1.04182674111352,2.51264699101243,3.37657566019008,1.37518422999129,2.65165726926301,1.99320353118744,2.05039390407831,0.302904773332736,0.226714680320357,23.7688880735376,6.88339101585109,3.39985666853875,0,3.24888208723835,0.448026887097336,1.68533304158102,1.02258193546835,2.85764605063156,1.41335829804136,2.25349471642689,0,2.54805239706646,14.2213340630666,0.432982082022428,0.760079596425296,1.51657333504435,2.39786147410026,10.8753911131812,3.11728492036132,2.94925055502431,3.04465478312141,2.30615497256059,2.56228488939458,1.52865319276416,1.38233250462643,1.48316980640624,2.31358971071859,1.76922110389975,2.91180329905337,2.20841518460394,3.87900202508178,7.45567044872489,0.878342391034642,0.209446706813455,4.59822699375465,2.99537811264801,4.19931911695385,4.06624726633807,1.3481157546434,0.915001205637253,1.1308891690157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| ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=40 | |||
|UniProt= | |||
|association_with_transcript=-7bp_to_ENSMUST00000146333_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000146333_5end | |||
|id=chr11:63893049..63893076,+ | |||
|ontology_enrichment_celltype=CL:0000542!2.51e-08!13;CL:0000051!2.51e-08!13;CL:0000838!4.79e-08!12;CL:0000084!8.73e-08!11;CL:0000827!8.73e-08!11;CL:0000791!8.64e-07!9;CL:0000789!8.64e-07!9;CL:0002420!8.64e-07!9;CL:0002419!8.64e-07!9;CL:0000790!8.64e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.38e-08,13;CL:0000051,2.38e-08,13;CL:0000838,4.55e-08,12;CL:0000084,8.32e-08,11;CL:0000827,8.32e-08,11;CL:0000791,8.30e-07,9;CL:0000789,8.30e-07,9;CL:0002420,8.30e-07,9;CL:0002419,8.30e-07,9;CL:0000790,8.30e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.76e-11!29;UBERON:0003408!1.05e-10!24;UBERON:0002370!2.41e-10!23;UBERON:0000974!2.41e-10!23;UBERON:0004807!2.41e-10!23;UBERON:0005058!2.41e-10!23;UBERON:0003351!2.41e-10!23;UBERON:0009113!2.41e-10!23;UBERON:0003295!2.41e-10!23;UBERON:0009722!2.41e-10!23;UBERON:0005562!2.41e-10!23;UBERON:0007690!2.41e-10!23;UBERON:0003929!2.89e-10!55;UBERON:0006562!2.73e-09!24;UBERON:0001557!2.73e-09!24;UBERON:0001042!2.73e-09!24;UBERON:0008814!2.73e-09!24;UBERON:0009145!2.73e-09!24;UBERON:0005911!1.01e-08!69;UBERON:0005057!1.04e-08!51;UBERON:0002368!5.03e-08!60;UBERON:0000490!5.66e-08!66;UBERON:0002193!7.36e-08!48;UBERON:0002530!7.95e-08!65;UBERON:0002390!1.77e-07!45;UBERON:0003061!1.77e-07!45;UBERON:0001007!2.62e-07!128;UBERON:0001555!2.62e-07!128;UBERON:0007026!2.62e-07!128;UBERON:0004921!3.06e-07!126;UBERON:0004185!3.06e-07!126;UBERON:0002405!3.87e-07!70;UBERON:0004119!5.43e-07!130;UBERON:0000925!5.43e-07!130;UBERON:0006595!5.43e-07!130;UBERON:0000072!8.84e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.97e-11,29;UBERON:0005057,1.97e-11,29;UBERON:0003408,7.43e-11,24;UBERON:0002370,1.70e-10,23;UBERON:0000974,1.70e-10,23;UBERON:0004807,1.70e-10,23;UBERON:0005058,1.70e-10,23;UBERON:0003351,1.70e-10,23;UBERON:0009113,1.70e-10,23;UBERON:0003295,1.70e-10,23;UBERON:0009722,1.70e-10,23;UBERON:0005562,1.70e-10,23;UBERON:0007690,1.70e-10,23;UBERON:0003929,2.09e-10,55;UBERON:0000077,1.83e-09,35;UBERON:0006562,2.53e-09,24;UBERON:0001557,2.53e-09,24;UBERON:0001042,2.53e-09,24;UBERON:0008814,2.53e-09,24;UBERON:0009145,2.53e-09,24;UBERON:0001007,2.92e-09,116;UBERON:0001555,2.92e-09,116;UBERON:0007026,2.92e-09,116;UBERON:0004921,3.33e-09,114;UBERON:0004119,8.37e-09,118;UBERON:0000925,8.37e-09,118;UBERON:0006595,8.37e-09,118;UBERON:0005911,1.12e-08,69;UBERON:0002368,3.86e-08,60;UBERON:0002193,4.10e-08,48;UBERON:0002405,4.10e-08,48;UBERON:0000490,5.12e-08,66;UBERON:0002530,6.17e-08,65;UBERON:0002390,9.92e-08,45;UBERON:0003061,9.92e-08,45;UBERON:0007811,1.86e-07,36;UBERON:0000153,2.05e-07,43;UBERON:0000072,8.15e-07,27 | |||
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| |||
|short_description=p1@ENSMUST00000146333 | |||
}} |
Revision as of 20:21, 12 September 2013
Short description: | p1@ENSMUST00000146333 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000146333_5end |
Coexpression cluster: | MCL_coexpression_mm9:40 |
Association with transcript: | -7bp_to_ENSMUST00000146333_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.38e-08 | 13 |
common lymphoid progenitor | 2.38e-08 | 13 |
lymphoid lineage restricted progenitor cell | 4.55e-08 | 12 |
T cell | 8.32e-08 | 11 |
pro-T cell | 8.32e-08 | 11 |
mature alpha-beta T cell | 8.30e-07 | 9 |
alpha-beta T cell | 8.30e-07 | 9 |
immature T cell | 8.30e-07 | 9 |
mature T cell | 8.30e-07 | 9 |
immature alpha-beta T cell | 8.30e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.