Personal tools

FFCP PHASE1:Mm9::chr11:76250687..76250699,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=109934|HGNC=|UniProt=|association_with_transcript=22bp_to_ENSMUST00000131059_5end|description=CAGE_peak_23_at_Abr_5end|id=chr11:76250687..76250699,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002614,2.00e-10,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.80e-09!63;UBERON:0000955!1.59e-08!50;UBERON:0006238!1.59e-08!50;UBERON:0001049!2.42e-08!52;UBERON:0005068!2.42e-08!52;UBERON:0006241!2.42e-08!52;UBERON:0007135!2.42e-08!52;UBERON:0002616!3.77e-08!49|ontology_enrichment_uberon_v019_2=UBERON:0002950,1.46e-13,4;UBERON:0001891,1.46e-13,4;UBERON:0009616,1.46e-13,4;UBERON:0010286,1.46e-13,4;UBERON:0002038,2.00e-10,3;UBERON:0009663,2.00e-10,3;UBERON:0009661,2.00e-10,3;UBERON:0000125,2.00e-10,3;UBERON:0002308,2.00e-10,3;UBERON:0000073,2.77e-10,54;UBERON:0001049,2.29e-09,52;UBERON:0005068,2.29e-09,52;UBERON:0006241,2.29e-09,52;UBERON:0007135,2.29e-09,52;UBERON:0001017,3.05e-09,73;UBERON:0002616,3.22e-09,46;UBERON:0000955,5.75e-09,47;UBERON:0006238,5.75e-09,47;UBERON:0001016,6.68e-09,75;UBERON:0004733,1.09e-08,6;UBERON:0004732,1.09e-08,6;UBERON:0002028,1.09e-08,6;UBERON:0007277,1.09e-08,6;UBERON:0002346,2.25e-08,64;UBERON:0003075,2.25e-08,64;UBERON:0007284,2.25e-08,64;UBERON:0001896,1.00e-07,2;UBERON:0002298,1.00e-07,2;UBERON:0005290,1.00e-07,2;UBERON:0010096,1.00e-07,2;UBERON:0010314,1.31e-07,92;UBERON:0004121,2.50e-07,95;UBERON:0000924,2.50e-07,95;UBERON:0006601,2.50e-07,95;UBERON:0010371,5.78e-07,73|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0,0.782391344348039,0.65407546914134,0.219686182734472,0.388859798148567,0.419959264876088,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0.384218305321555,0,0.135005938331691,0,0.571301968807607,0.883474163806454,0,0,0,0,2.042997409363,1.0752457327937,0.131886287730194,0,0.52091337055676,1.67509799400829,2.25105044012672,1.37518422999129,0,0.569486723196412,0,0,0,0.579728977403356,0,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0.323533699894818,0.441683036920787,0,0,1.46390398505774,1.04723353406728,0.510914110417183,0,0,0,2.69623150928681,0,0.251308704225729,0.869121600961382,1.53429274398198,1.0389402227978,1.46017136760982,0.203678727700633,0.124406970610093,0.252722758433675,0,0.130120442962704,0.919608417733892,0.180062129805349,0.452114453507145,0.544291993210623,0.512454881139399,0.187403449119458,3.10444044886819,0,0,0.351902248327898,0,0.556094498451196,0,0.61734640922383,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0.393528463494808,0,0,1.3413670069981,0.467061369468678,0.16455984991348,1.14917224855367,0.56748166682099,0.438599962275997,1.09775057645525,0.268412837520744,0.420579897128254,0.411618449517138,0,0,0.426576501070468,0.464473343720877,0.77320476793256,0.80673409849337,0.889512175379481,0.380451252225118,0.949058123089023,0.494096864172033,0.251335208800269,0.198956472041151,0.779856348476481,1.79763881730844,0.216138049874694,0.199141273254367,0.189667900953082,0.228497025219458,0,0.203651327845314,0.775809948670503,0.420814919341911,0.379419222745544,0.590440591918409,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.554259570499814,0.37898282354097,0.325929952884052,0,1.17345124144251,0.502518772325447,0.476087281772027,0.585400943573396,0.788175720530955,1.10732344824387,0.478364305972461,0.163863314715738,0.518054945597687,0.144649058581512,0,0,0,0,2.88991061978026,1.64096361229084,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0.141940085208269,0.534196811001766,0,0.494910368917606,0,0.242780636154981,0,0,0.295301892880773,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,1.70219802876894,0.18006109403131,0.517434735131018,0,0.177340233642274,0.535106452806212,0.658196082408484,0.608929898229199,0.23467170806371,0,0,0.49465875882444,0,0.120625849856312,0.358117032009409,0.328281799490123,0.582961673259701,3.70850604021019,0,0.82554747185289,0,0,0,0.228778173206523,0,0,0,0.954670618015114,0.316335993581135,0,0.540026704109006,1.04544148007234,0.218362563746178,0.674321731924103,0.247960367176008,0.26175594198403,0.388844919875379,0,0,0,0.165458490457098,0.194451188344048,0.387479470433193,0,0.234714477291508,0.2604087696879,0.104859344425711,0,0,0,0.202725215290164,0.308132871494482,0,0.179026695667481,0,0.240390899039938,0,0,0.15241361331,0.100826185136841,0.194915761479505,0.0962118416403295,0,0.680191150845634,0,0.0897138566094757,0,0.579568782096571,0.187682475451182,0,0.428736758158132,0,1.6942555278512,0.460325236507177,0,0,0.685082519770642,1.5107877947794,0.675022500231806,0.900642406448441,0.453142408984205,0,0.207574695168353,0.399024873401031,0,0.243106717068294,0.419226325255965,0,0.222246727801615,0.618105171716683,0,0.252697211763798,0.50695859978048,0.565879024158229,0,0.320125762024346,0.287177344778066,0.952587382566147,0.463537303779422,0.38581844092741,0,0,1.02860775715625,0.354951612318675,0,0,0.564656282491984,0.592302255241736,0,1.05227884575137,0.271608227691724,0,0,0.29551344712669,0.818462086339379,0.309873682371932,0.192906610981141,0.499621155875892,0.701794825336225,0.429742108096597,0.956441660344217,1.10295709559758,0|short_description=p23@Abr}}
|EntrezGene=109934
|HGNC=
|UniProt=
|association_with_transcript=22bp_to_ENSMUST00000131059_5end
|description=CAGE_peak_23_at_Abr_5end
|id=chr11:76250687..76250699,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002614,2.00e-10,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!2.80e-09!63;UBERON:0000955!1.59e-08!50;UBERON:0006238!1.59e-08!50;UBERON:0001049!2.42e-08!52;UBERON:0005068!2.42e-08!52;UBERON:0006241!2.42e-08!52;UBERON:0007135!2.42e-08!52;UBERON:0002616!3.77e-08!49
|ontology_enrichment_uberon_v019_2=UBERON:0002950,1.46e-13,4;UBERON:0001891,1.46e-13,4;UBERON:0009616,1.46e-13,4;UBERON:0010286,1.46e-13,4;UBERON:0002038,2.00e-10,3;UBERON:0009663,2.00e-10,3;UBERON:0009661,2.00e-10,3;UBERON:0000125,2.00e-10,3;UBERON:0002308,2.00e-10,3;UBERON:0000073,2.77e-10,54;UBERON:0001049,2.29e-09,52;UBERON:0005068,2.29e-09,52;UBERON:0006241,2.29e-09,52;UBERON:0007135,2.29e-09,52;UBERON:0001017,3.05e-09,73;UBERON:0002616,3.22e-09,46;UBERON:0000955,5.75e-09,47;UBERON:0006238,5.75e-09,47;UBERON:0001016,6.68e-09,75;UBERON:0004733,1.09e-08,6;UBERON:0004732,1.09e-08,6;UBERON:0002028,1.09e-08,6;UBERON:0007277,1.09e-08,6;UBERON:0002346,2.25e-08,64;UBERON:0003075,2.25e-08,64;UBERON:0007284,2.25e-08,64;UBERON:0001896,1.00e-07,2;UBERON:0002298,1.00e-07,2;UBERON:0005290,1.00e-07,2;UBERON:0010096,1.00e-07,2;UBERON:0010314,1.31e-07,92;UBERON:0004121,2.50e-07,95;UBERON:0000924,2.50e-07,95;UBERON:0006601,2.50e-07,95;UBERON:0010371,5.78e-07,73
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0,0.782391344348039,0.65407546914134,0.219686182734472,0.388859798148567,0.419959264876088,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0.384218305321555,0,0.135005938331691,0,0.571301968807607,0.883474163806454,0,0,0,0,2.042997409363,1.0752457327937,0.131886287730194,0,0.52091337055676,1.67509799400829,2.25105044012672,1.37518422999129,0,0.569486723196412,0,0,0,0.579728977403356,0,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0.323533699894818,0.441683036920787,0,0,1.46390398505774,1.04723353406728,0.510914110417183,0,0,0,2.69623150928681,0,0.251308704225729,0.869121600961382,1.53429274398198,1.0389402227978,1.46017136760982,0.203678727700633,0.124406970610093,0.252722758433675,0,0.130120442962704,0.919608417733892,0.180062129805349,0.452114453507145,0.544291993210623,0.512454881139399,0.187403449119458,3.10444044886819,0,0,0.351902248327898,0,0.556094498451196,0,0.61734640922383,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0.393528463494808,0,0,1.3413670069981,0.467061369468678,0.16455984991348,1.14917224855367,0.56748166682099,0.438599962275997,1.09775057645525,0.268412837520744,0.420579897128254,0.411618449517138,0,0,0.426576501070468,0.464473343720877,0.77320476793256,0.80673409849337,0.889512175379481,0.380451252225118,0.949058123089023,0.494096864172033,0.251335208800269,0.198956472041151,0.779856348476481,1.79763881730844,0.216138049874694,0.199141273254367,0.189667900953082,0.228497025219458,0,0.203651327845314,0.775809948670503,0.420814919341911,0.379419222745544,0.590440591918409,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.554259570499814,0.37898282354097,0.325929952884052,0,1.17345124144251,0.502518772325447,0.476087281772027,0.585400943573396,0.788175720530955,1.10732344824387,0.478364305972461,0.163863314715738,0.518054945597687,0.144649058581512,0,0,0,0,2.88991061978026,1.64096361229084,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0.141940085208269,0.534196811001766,0,0.494910368917606,0,0.242780636154981,0,0,0.295301892880773,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,1.70219802876894,0.18006109403131,0.517434735131018,0,0.177340233642274,0.535106452806212,0.658196082408484,0.608929898229199,0.23467170806371,0,0,0.49465875882444,0,0.120625849856312,0.358117032009409,0.328281799490123,0.582961673259701,3.70850604021019,0,0.82554747185289,0,0,0,0.228778173206523,0,0,0,0.954670618015114,0.316335993581135,0,0.540026704109006,1.04544148007234,0.218362563746178,0.674321731924103,0.247960367176008,0.26175594198403,0.388844919875379,0,0,0,0.165458490457098,0.194451188344048,0.387479470433193,0,0.234714477291508,0.2604087696879,0.104859344425711,0,0,0,0.202725215290164,0.308132871494482,0,0.179026695667481,0,0.240390899039938,0,0,0.15241361331,0.100826185136841,0.194915761479505,0.0962118416403295,0,0.680191150845634,0,0.0897138566094757,0,0.579568782096571,0.187682475451182,0,0.428736758158132,0,1.6942555278512,0.460325236507177,0,0,0.685082519770642,1.5107877947794,0.675022500231806,0.900642406448441,0.453142408984205,0,0.207574695168353,0.399024873401031,0,0.243106717068294,0.419226325255965,0,0.222246727801615,0.618105171716683,0,0.252697211763798,0.50695859978048,0.565879024158229,0,0.320125762024346,0.287177344778066,0.952587382566147,0.463537303779422,0.38581844092741,0,0,1.02860775715625,0.354951612318675,0,0,0.564656282491984,0.592302255241736,0,1.05227884575137,0.271608227691724,0,0,0.29551344712669,0.818462086339379,0.309873682371932,0.192906610981141,0.499621155875892,0.701794825336225,0.429742108096597,0.956441660344217,1.10295709559758,0
|short_description=p23@Abr
}}

Revision as of 20:56, 12 September 2013

Short description:p23@Abr
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_23_at_Abr_5end
Coexpression cluster:NA
Association with transcript: 22bp_to_ENSMUST00000131059_5end
EntrezGene:Abr
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p23@Abr

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.70
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.89
medulla oblongata, neonate N30.CNhs11200.1396-42A31.64
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C93.71
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron of the substantia nigra2.00e-103

Uber anatomy
Ontology termp-valuen
regional part of midbrain1.46e-134
midbrain1.46e-134
presumptive midbrain1.46e-134
midbrain neural tube1.46e-134
substantia nigra2.00e-103
telencephalic nucleus2.00e-103
midbrain nucleus2.00e-103
neural nucleus2.00e-103
nucleus of brain2.00e-103
regional part of nervous system2.77e-1054
neural tube2.29e-0952
neural rod2.29e-0952
future spinal cord2.29e-0952
neural keel2.29e-0952
central nervous system3.05e-0973
regional part of brain3.22e-0946
brain5.75e-0947
future brain5.75e-0947
nervous system6.68e-0975
segmental subdivision of hindbrain1.09e-086
segmental subdivision of nervous system1.09e-086
hindbrain1.09e-086
presumptive hindbrain1.09e-086
neurectoderm2.25e-0864
neural plate2.25e-0864
presumptive neural plate2.25e-0864
medulla oblongata1.00e-072
brainstem1.00e-072
myelencephalon1.00e-072
future myelencephalon1.00e-072
structure with developmental contribution from neural crest1.31e-0792
ectoderm-derived structure2.50e-0795
ectoderm2.50e-0795
presumptive ectoderm2.50e-0795
ecto-epithelium5.78e-0773







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:76250687..76250699,-&oldid=2895203"