FFCP PHASE1:Hg19::chr3:171758298..171758336,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64778 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24670 | |||
|TSSclassifier=S | |||
|UniProt=Q53EP0 | |||
|association_with_transcript=-7bp_to_ENST00000336824,NM_001135095,uc003fhz.3_5end | |||
|description=CAGE_peak_2_at_FNDC3B_5end | |||
|id=chr3:171758298..171758336,+ | |||
|ontology_enrichment_celltype=CL:0000222!3.28e-16!119;CL:0000055!8.65e-16!180;CL:0000057!8.19e-12!75;CL:0002371!1.68e-11!591;CL:0000144!2.01e-10!625;CL:0000220!2.30e-10!246;CL:0000192!4.12e-10!42;CL:0000514!4.12e-10!42;CL:0000680!4.42e-10!57;CL:0000056!4.42e-10!57;CL:0000355!4.42e-10!57;CL:0000187!5.88e-10!54;CL:0002321!6.45e-10!248;CL:0000359!2.56e-09!32;CL:0000183!6.92e-09!59;CL:0000548!1.86e-08!679;CL:0000004!1.86e-08!679;CL:0000255!1.86e-08!679;CL:0000012!6.28e-08!682;CL:0002078!2.44e-07!44;CL:0000393!5.96e-07!60;CL:0000211!5.96e-07!60;CL:0000115!6.98e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000359;7.75e-09;32!CL:0000192;1.40e-07;43!CL:0000134;1.97e-07;55 | |||
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| |||
|short_description=p2@FNDC3B | |||
}} |
Revision as of 22:44, 12 September 2013
Short description: | p2@FNDC3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_FNDC3B_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_ENST00000336824, NM_001135095, uc003fhz.3_5end |
EntrezGene: | FNDC3B |
HGNC: | 24670 |
UniProt: | Q53EP0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.71e-16 | 121 |
fibroblast | 2.30e-12 | 76 |
smooth muscle cell | 3.38e-10 | 43 |
smooth muscle myoblast | 3.38e-10 | 43 |
muscle precursor cell | 3.49e-10 | 58 |
myoblast | 3.49e-10 | 58 |
multi-potent skeletal muscle stem cell | 3.49e-10 | 58 |
muscle cell | 4.67e-10 | 55 |
embryonic cell | 6.21e-10 | 250 |
vascular associated smooth muscle cell | 2.50e-09 | 32 |
meso-epithelial cell | 2.80e-07 | 45 |
electrically responsive cell | 5.52e-07 | 61 |
electrically active cell | 5.52e-07 | 61 |
endothelial cell | 8.33e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.70e-08 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.