FFCP PHASE1:Mm9::chr13:100192830..100192842,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=158|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:100192830..100192842,-|id=chr13:100192830..100192842,-|ontology_enrichment_celltype=CL:0000117!2.44e-17!23;CL:0000337!2.44e-17!23;CL:0000540!2.93e-14!33;CL:0000047!2.93e-14!33;CL:0000031!2.93e-14!33;CL:0000404!2.93e-14!33;CL:0000221!8.02e-12!44;CL:0000133!8.02e-12!44;CL:0002319!1.02e-11!43;CL:0000393!5.98e-11!39;CL:0000211!5.98e-11!39;CL:0000055!6.22e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,3.40e-20,23;CL:0000337,3.40e-20,23;CL:0000540,2.19e-13,33;CL:0000047,2.19e-13,33;CL:0000031,2.19e-13,33;CL:0000404,2.19e-13,33;CL:0002612,8.99e-12,3;CL:0000393,5.63e-11,39;CL:0000211,5.63e-11,39;CL:0002319,9.60e-10,43;CL:0002609,1.17e-09,6;CL:0000221,1.80e-09,44;CL:0000133,1.80e-09,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.79e-25!71;UBERON:0003075!2.79e-25!71;UBERON:0007284!2.79e-25!71;UBERON:0000073!1.63e-23!75;UBERON:0001016!1.63e-23!75;UBERON:0001017!4.04e-23!73;UBERON:0005743!4.04e-23!73;UBERON:0004121!2.81e-22!102;UBERON:0000924!2.81e-22!102;UBERON:0006601!2.81e-22!102;UBERON:0001049!1.64e-21!52;UBERON:0005068!1.64e-21!52;UBERON:0006241!1.64e-21!52;UBERON:0007135!1.64e-21!52;UBERON:0000033!1.49e-20!63;UBERON:0002020!3.06e-20!34;UBERON:0000955!5.30e-20!50;UBERON:0006238!5.30e-20!50;UBERON:0003056!9.25e-20!49;UBERON:0002616!3.31e-19!49;UBERON:0003080!1.97e-17!40;UBERON:0002780!1.27e-16!39;UBERON:0001890!1.27e-16!39;UBERON:0006240!1.27e-16!39;UBERON:0002791!2.35e-16!29;UBERON:0003528!2.35e-16!29;UBERON:0001893!2.35e-16!29;UBERON:0000956!3.53e-11!21;UBERON:0001869!3.53e-11!21;UBERON:0000203!3.53e-11!21;UBERON:0007811!5.38e-10!86;UBERON:0002619!1.31e-08!17;UBERON:0000153!9.60e-08!94;UBERON:0000025!4.91e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.78e-23,34;UBERON:0000073,2.58e-22,54;UBERON:0001049,6.42e-21,52;UBERON:0005068,6.42e-21,52;UBERON:0006241,6.42e-21,52;UBERON:0007135,6.42e-21,52;UBERON:0001017,1.88e-19,73;UBERON:0001016,7.95e-19,75;UBERON:0002346,2.60e-18,64;UBERON:0003075,2.60e-18,64;UBERON:0007284,2.60e-18,64;UBERON:0000955,3.61e-18,47;UBERON:0006238,3.61e-18,47;UBERON:0003528,7.70e-18,29;UBERON:0002791,7.70e-18,29;UBERON:0001893,7.70e-18,29;UBERON:0003080,8.67e-17,40;UBERON:0002616,2.44e-16,46;UBERON:0004121,1.36e-15,95;UBERON:0000924,1.36e-15,95;UBERON:0006601,1.36e-15,95;UBERON:0010371,1.39e-15,73;UBERON:0003056,3.61e-15,49;UBERON:0002780,6.94e-15,39;UBERON:0001890,6.94e-15,39;UBERON:0006240,6.94e-15,39;UBERON:0000956,4.57e-12,21;UBERON:0001869,4.57e-12,21;UBERON:0000203,4.57e-12,21;UBERON:0002257,8.99e-12,3;UBERON:0010314,1.43e-11,92;UBERON:0002619,2.51e-09,17;UBERON:0001954,2.64e-08,7;UBERON:0003022,2.64e-08,7;UBERON:0002421,2.64e-08,7;UBERON:0000349,2.64e-08,7;UBERON:0002600,2.64e-08,7;UBERON:0000025,1.56e-07,114;UBERON:0001948,3.19e-07,5;UBERON:0002315,3.19e-07,5;UBERON:0002420,4.47e-07,8;UBERON:0007245,4.47e-07,8;UBERON:0010009,4.47e-07,8;UBERON:0010011,4.47e-07,8;UBERON:0000454,4.47e-07,8;UBERON:0004111,8.54e-07,122|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.404632921719196,3.1739458756322,0.633831403506179,0,0,0,0,0,0,0,1.34796496001021,0.405017814995072,1.26194976810829,0.571301968807607,0.662605622854841,0.979926393719632,1.43768206527355,1.83843757322004,1.10115880999389,0.766124028511126,0.768032666281217,0.923204014111357,2.56165402086747,1.04182674111352,0.279182999001381,0.56276261003168,1.37518422999129,3.83017161115768,1.99320353118744,1.3047961207771,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0.461230994512117,0.150722640552623,0.23517741427141,0.251333182659351,0,0,0,0.161766849947409,0,0,0,0.585561594023094,0,0,0,0,0,1.3481157546434,0.457500602818626,1.25654352112864,0.869121600961382,0.511430914660661,1.45451631191692,0.324482526135515,0.203678727700633,0.248813941220186,0.252722758433675,0,0.260240885925407,0.229902104433473,0.180062129805349,0.30140963567143,0.272145996605311,0.768682321709099,0.187403449119458,1.29351685369508,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0.473489471170421,0,0.462801338662135,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0,0,0,0,1.05144974282064,1.64647379806855,0,0,0.213288250535234,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0,0,0.345369963731791,0,0,0,0,0,1.28440471990234,0.703270119553219,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0,0,0.283076530788832,0,0.584511715822624,0,1.28528526568723,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0,0.2953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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=158 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:100192830..100192842,- | |||
|id=chr13:100192830..100192842,- | |||
|ontology_enrichment_celltype=CL:0000117!2.44e-17!23;CL:0000337!2.44e-17!23;CL:0000540!2.93e-14!33;CL:0000047!2.93e-14!33;CL:0000031!2.93e-14!33;CL:0000404!2.93e-14!33;CL:0000221!8.02e-12!44;CL:0000133!8.02e-12!44;CL:0002319!1.02e-11!43;CL:0000393!5.98e-11!39;CL:0000211!5.98e-11!39;CL:0000055!6.22e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.40e-20,23;CL:0000337,3.40e-20,23;CL:0000540,2.19e-13,33;CL:0000047,2.19e-13,33;CL:0000031,2.19e-13,33;CL:0000404,2.19e-13,33;CL:0002612,8.99e-12,3;CL:0000393,5.63e-11,39;CL:0000211,5.63e-11,39;CL:0002319,9.60e-10,43;CL:0002609,1.17e-09,6;CL:0000221,1.80e-09,44;CL:0000133,1.80e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.79e-25!71;UBERON:0003075!2.79e-25!71;UBERON:0007284!2.79e-25!71;UBERON:0000073!1.63e-23!75;UBERON:0001016!1.63e-23!75;UBERON:0001017!4.04e-23!73;UBERON:0005743!4.04e-23!73;UBERON:0004121!2.81e-22!102;UBERON:0000924!2.81e-22!102;UBERON:0006601!2.81e-22!102;UBERON:0001049!1.64e-21!52;UBERON:0005068!1.64e-21!52;UBERON:0006241!1.64e-21!52;UBERON:0007135!1.64e-21!52;UBERON:0000033!1.49e-20!63;UBERON:0002020!3.06e-20!34;UBERON:0000955!5.30e-20!50;UBERON:0006238!5.30e-20!50;UBERON:0003056!9.25e-20!49;UBERON:0002616!3.31e-19!49;UBERON:0003080!1.97e-17!40;UBERON:0002780!1.27e-16!39;UBERON:0001890!1.27e-16!39;UBERON:0006240!1.27e-16!39;UBERON:0002791!2.35e-16!29;UBERON:0003528!2.35e-16!29;UBERON:0001893!2.35e-16!29;UBERON:0000956!3.53e-11!21;UBERON:0001869!3.53e-11!21;UBERON:0000203!3.53e-11!21;UBERON:0007811!5.38e-10!86;UBERON:0002619!1.31e-08!17;UBERON:0000153!9.60e-08!94;UBERON:0000025!4.91e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.78e-23,34;UBERON:0000073,2.58e-22,54;UBERON:0001049,6.42e-21,52;UBERON:0005068,6.42e-21,52;UBERON:0006241,6.42e-21,52;UBERON:0007135,6.42e-21,52;UBERON:0001017,1.88e-19,73;UBERON:0001016,7.95e-19,75;UBERON:0002346,2.60e-18,64;UBERON:0003075,2.60e-18,64;UBERON:0007284,2.60e-18,64;UBERON:0000955,3.61e-18,47;UBERON:0006238,3.61e-18,47;UBERON:0003528,7.70e-18,29;UBERON:0002791,7.70e-18,29;UBERON:0001893,7.70e-18,29;UBERON:0003080,8.67e-17,40;UBERON:0002616,2.44e-16,46;UBERON:0004121,1.36e-15,95;UBERON:0000924,1.36e-15,95;UBERON:0006601,1.36e-15,95;UBERON:0010371,1.39e-15,73;UBERON:0003056,3.61e-15,49;UBERON:0002780,6.94e-15,39;UBERON:0001890,6.94e-15,39;UBERON:0006240,6.94e-15,39;UBERON:0000956,4.57e-12,21;UBERON:0001869,4.57e-12,21;UBERON:0000203,4.57e-12,21;UBERON:0002257,8.99e-12,3;UBERON:0010314,1.43e-11,92;UBERON:0002619,2.51e-09,17;UBERON:0001954,2.64e-08,7;UBERON:0003022,2.64e-08,7;UBERON:0002421,2.64e-08,7;UBERON:0000349,2.64e-08,7;UBERON:0002600,2.64e-08,7;UBERON:0000025,1.56e-07,114;UBERON:0001948,3.19e-07,5;UBERON:0002315,3.19e-07,5;UBERON:0002420,4.47e-07,8;UBERON:0007245,4.47e-07,8;UBERON:0010009,4.47e-07,8;UBERON:0010011,4.47e-07,8;UBERON:0000454,4.47e-07,8;UBERON:0004111,8.54e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.404632921719196,3.1739458756322,0.633831403506179,0,0,0,0,0,0,0,1.34796496001021,0.405017814995072,1.26194976810829,0.571301968807607,0.662605622854841,0.979926393719632,1.43768206527355,1.83843757322004,1.10115880999389,0.766124028511126,0.768032666281217,0.923204014111357,2.56165402086747,1.04182674111352,0.279182999001381,0.56276261003168,1.37518422999129,3.83017161115768,1.99320353118744,1.3047961207771,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0.461230994512117,0.150722640552623,0.23517741427141,0.251333182659351,0,0,0,0.161766849947409,0,0,0,0.585561594023094,0,0,0,0,0,1.3481157546434,0.457500602818626,1.25654352112864,0.869121600961382,0.511430914660661,1.45451631191692,0.324482526135515,0.203678727700633,0.248813941220186,0.252722758433675,0,0.260240885925407,0.229902104433473,0.180062129805349,0.30140963567143,0.272145996605311,0.768682321709099,0.187403449119458,1.29351685369508,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0.473489471170421,0,0.462801338662135,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0,0,0,0,1.05144974282064,1.64647379806855,0,0,0.213288250535234,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0,0,0.345369963731791,0,0,0,0,0,1.28440471990234,0.703270119553219,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0,0,0.283076530788832,0,0.584511715822624,0,1.28528526568723,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0,0.36012218806262,0.646793418913773,0.428674070063185,0.177340233642274,0,0.164549020602121,0,0,0,0,0,0,0.120625849856312,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0.337912250981556,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,2.29158205375759,0.68741272937475,0,0.755393897389701,0,0.45032120322422,1.35942722695261,1.03552062350364,0.415149390336707,0,0.341467211508268,0.486213434136588,0.628839487883947,0,0,0.206035057238894,0.962757628775446,1.26348605881899,0,0.565879024158229,0.468207537349412,0.0640251524048693,0.402048282689293,0.476293691283074,0.347652977834566,0.192909220463705,0,0.294397840268795,0.342869252385415,0.887379030796687,0,0.436039249896986,0.470546902076653,0.25384382367503,0.548783918618318,1.05227884575137,0.543216455383447,1.12228454331548,0.237270036248348,0.29551344712669,0.818462086339379,0.77468420592983,0.771626443924566,0.999242311751784,0,0.429742108096597,0,0,0.231867835620421 | |||
|short_description=p@chr13:100192830..100192842,- | |||
}} |
Revision as of 23:39, 12 September 2013
Short description: | p@chr13:100192830..100192842, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:100192830..100192842, - |
Coexpression cluster: | MCL_coexpression_mm9:158 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.40e-20 | 23 |
neuroblast (sensu Vertebrata) | 3.40e-20 | 23 |
neuron | 2.19e-13 | 33 |
neuronal stem cell | 2.19e-13 | 33 |
neuroblast | 2.19e-13 | 33 |
electrically signaling cell | 2.19e-13 | 33 |
neuron of the ventral spinal cord | 8.99e-12 | 3 |
electrically responsive cell | 5.63e-11 | 39 |
electrically active cell | 5.63e-11 | 39 |
neural cell | 9.60e-10 | 43 |
neuron of cerebral cortex | 1.17e-09 | 6 |
ectodermal cell | 1.80e-09 | 44 |
neurectodermal cell | 1.80e-09 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.