FFCP PHASE1:Hg19::chr5:154199495..154199513,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10826|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=1334|TSSclassifier=W|UniProt=|association_with_transcript=114bp_to_uc003lvq.2_5end|description=CAGE_peak_9_at_C5orf4_5end|id=chr5:154199495..154199513,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!7.25e-51!115;UBERON:0001049!5.27e-25!57;UBERON:0005068!5.27e-25!57;UBERON:0006241!5.27e-25!57;UBERON:0007135!5.27e-25!57;UBERON:0005743!5.06e-22!86;UBERON:0001017!1.53e-21!82;UBERON:0002346!1.13e-20!90;UBERON:0002616!2.95e-20!59;UBERON:0003075!2.28e-19!86;UBERON:0007284!2.28e-19!86;UBERON:0000073!2.23e-18!94;UBERON:0001016!2.23e-18!94;UBERON:0002780!2.77e-18!41;UBERON:0001890!2.77e-18!41;UBERON:0006240!2.77e-18!41;UBERON:0000955!5.50e-18!69;UBERON:0006238!5.50e-18!69;UBERON:0003080!1.29e-17!42;UBERON:0002020!3.15e-14!34;UBERON:0003528!3.15e-14!34;UBERON:0001893!4.58e-14!34;UBERON:0003056!1.51e-13!61;UBERON:0002791!2.38e-13!33;UBERON:0001869!3.11e-12!32;UBERON:0000033!5.51e-12!123;UBERON:0000153!5.83e-12!129;UBERON:0007811!5.83e-12!129;UBERON:0000924!9.16e-11!173;UBERON:0006601!9.16e-11!173;UBERON:0000025!1.89e-10!194;UBERON:0004111!2.46e-10!241;UBERON:0000477!2.67e-10!286;UBERON:0002619!4.80e-10!22;UBERON:0000119!7.44e-10!312;UBERON:0004121!7.51e-10!169;UBERON:0000468!2.43e-09!659;UBERON:0000483!2.58e-09!309;UBERON:0003076!1.24e-08!15;UBERON:0003057!1.24e-08!15;UBERON:0000956!2.52e-08!25;UBERON:0000203!2.52e-08!25;UBERON:0002308!3.34e-08!9;UBERON:0000125!3.34e-08!9;UBERON:0001950!3.55e-08!20;UBERON:0000922!3.83e-08!612;UBERON:0000475!8.50e-08!365;UBERON:0002420!9.17e-08!9;UBERON:0007245!9.17e-08!9;UBERON:0010009!9.17e-08!9;UBERON:0010011!9.17e-08!9;UBERON:0000454!9.17e-08!9;UBERON:0000481!1.09e-07!347;UBERON:0002298!1.14e-07!8;UBERON:0002050!1.91e-07!605;UBERON:0005423!1.91e-07!605;UBERON:0000467!3.02e-07!625;UBERON:0000480!3.58e-07!626;UBERON:0000923!4.05e-07!604;UBERON:0005291!4.05e-07!604;UBERON:0006598!4.05e-07!604;UBERON:0002532!4.05e-07!604|ontology_enrichment_uberon_v019=UBERON:0000178;1.15e-20;15!UBERON:0000179;1.15e-20;15!UBERON:0000463;1.15e-20;15!UBERON:0002771;1.05e-18;2!UBERON:0000200;9.26e-14;6!UBERON:0002038;5.78e-10;1!UBERON:0003112;5.78e-10;1!UBERON:0011158;5.78e-10;1!UBERON:0009661;5.78e-10;1!UBERON:0002950;5.78e-10;1!UBERON:0003128;5.78e-10;1!UBERON:0001891;5.78e-10;1!UBERON:0001703;5.78e-10;1!UBERON:0002241;5.78e-10;1!UBERON:0002390;1.56e-09;32!UBERON:0002619;2.42e-09;22!UBERON:0000956;3.04e-08;25!UBERON:0000203;3.04e-08;25!UBERON:0002791;1.64e-07;32!UBERON:0007023;6.44e-07;114!UBERON:0001893;6.94e-07;34!UBERON:0001950;7.59e-07;20!UBERON:0000073;8.68e-07;53!UBERON:0002616;8.68e-07;53!UBERON:0002780;8.84e-07;41!UBERON:0001890;8.84e-07;41|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.28e-22,114;UBERON:0000178,1.26e-20,15;UBERON:0000179,1.26e-20,15;UBERON:0000463,1.26e-20,15;UBERON:0002771,6.43e-19,2;UBERON:0000200,9.09e-14,6;UBERON:0001049,4.44e-11,56;UBERON:0005068,4.44e-11,56;UBERON:0006241,4.44e-11,56;UBERON:0007135,4.44e-11,56;UBERON:0003112,4.85e-10,1;UBERON:0011158,4.85e-10,1;UBERON:0003128,4.85e-10,1;UBERON:0001703,4.85e-10,1;UBERON:0002241,4.85e-10,1;UBERON:0004761,4.85e-10,1;UBERON:0009617,4.85e-10,1;UBERON:0002038,1.17e-09,1;UBERON:0009661,1.17e-09,1;UBERON:0002950,1.17e-09,1;UBERON:0001891,1.17e-09,1;UBERON:0009616,1.17e-09,1;UBERON:0010286,1.17e-09,1;UBERON:0002619,2.36e-09,22;UBERON:0002780,2.43e-09,41;UBERON:0001890,2.43e-09,41;UBERON:0003080,2.43e-09,41;UBERON:0006240,2.43e-09,41;UBERON:0000073,3.03e-09,53;UBERON:0002616,3.03e-09,53;UBERON:0002791,5.39e-09,32;UBERON:0003528,1.87e-08,34;UBERON:0002020,1.87e-08,34;UBERON:0001893,1.87e-08,34;UBERON:0000956,2.97e-08,25;UBERON:0000203,2.97e-08,25;UBERON:0001017,3.32e-07,81;UBERON:0003075,3.32e-07,82;UBERON:0007284,3.32e-07,82;UBERON:0000955,6.73e-07,68;UBERON:0006238,6.73e-07,68;UBERON:0001950,7.91e-07,20;UBERON:0002346,8.14e-07,86|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0.261185628199839,0.245733936501509,1.39560233594486,0,0,0.247532705920093,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0.221729397462564,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0.33472061276467,0,0,0.24406205754817,0,0,0,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0.302714855289863,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0.3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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10826 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1334 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=114bp_to_uc003lvq.2_5end | |||
|description=CAGE_peak_9_at_C5orf4_5end | |||
|id=chr5:154199495..154199513,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.25e-51!115;UBERON:0001049!5.27e-25!57;UBERON:0005068!5.27e-25!57;UBERON:0006241!5.27e-25!57;UBERON:0007135!5.27e-25!57;UBERON:0005743!5.06e-22!86;UBERON:0001017!1.53e-21!82;UBERON:0002346!1.13e-20!90;UBERON:0002616!2.95e-20!59;UBERON:0003075!2.28e-19!86;UBERON:0007284!2.28e-19!86;UBERON:0000073!2.23e-18!94;UBERON:0001016!2.23e-18!94;UBERON:0002780!2.77e-18!41;UBERON:0001890!2.77e-18!41;UBERON:0006240!2.77e-18!41;UBERON:0000955!5.50e-18!69;UBERON:0006238!5.50e-18!69;UBERON:0003080!1.29e-17!42;UBERON:0002020!3.15e-14!34;UBERON:0003528!3.15e-14!34;UBERON:0001893!4.58e-14!34;UBERON:0003056!1.51e-13!61;UBERON:0002791!2.38e-13!33;UBERON:0001869!3.11e-12!32;UBERON:0000033!5.51e-12!123;UBERON:0000153!5.83e-12!129;UBERON:0007811!5.83e-12!129;UBERON:0000924!9.16e-11!173;UBERON:0006601!9.16e-11!173;UBERON:0000025!1.89e-10!194;UBERON:0004111!2.46e-10!241;UBERON:0000477!2.67e-10!286;UBERON:0002619!4.80e-10!22;UBERON:0000119!7.44e-10!312;UBERON:0004121!7.51e-10!169;UBERON:0000468!2.43e-09!659;UBERON:0000483!2.58e-09!309;UBERON:0003076!1.24e-08!15;UBERON:0003057!1.24e-08!15;UBERON:0000956!2.52e-08!25;UBERON:0000203!2.52e-08!25;UBERON:0002308!3.34e-08!9;UBERON:0000125!3.34e-08!9;UBERON:0001950!3.55e-08!20;UBERON:0000922!3.83e-08!612;UBERON:0000475!8.50e-08!365;UBERON:0002420!9.17e-08!9;UBERON:0007245!9.17e-08!9;UBERON:0010009!9.17e-08!9;UBERON:0010011!9.17e-08!9;UBERON:0000454!9.17e-08!9;UBERON:0000481!1.09e-07!347;UBERON:0002298!1.14e-07!8;UBERON:0002050!1.91e-07!605;UBERON:0005423!1.91e-07!605;UBERON:0000467!3.02e-07!625;UBERON:0000480!3.58e-07!626;UBERON:0000923!4.05e-07!604;UBERON:0005291!4.05e-07!604;UBERON:0006598!4.05e-07!604;UBERON:0002532!4.05e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.15e-20;15!UBERON:0000179;1.15e-20;15!UBERON:0000463;1.15e-20;15!UBERON:0002771;1.05e-18;2!UBERON:0000200;9.26e-14;6!UBERON:0002038;5.78e-10;1!UBERON:0003112;5.78e-10;1!UBERON:0011158;5.78e-10;1!UBERON:0009661;5.78e-10;1!UBERON:0002950;5.78e-10;1!UBERON:0003128;5.78e-10;1!UBERON:0001891;5.78e-10;1!UBERON:0001703;5.78e-10;1!UBERON:0002241;5.78e-10;1!UBERON:0002390;1.56e-09;32!UBERON:0002619;2.42e-09;22!UBERON:0000956;3.04e-08;25!UBERON:0000203;3.04e-08;25!UBERON:0002791;1.64e-07;32!UBERON:0007023;6.44e-07;114!UBERON:0001893;6.94e-07;34!UBERON:0001950;7.59e-07;20!UBERON:0000073;8.68e-07;53!UBERON:0002616;8.68e-07;53!UBERON:0002780;8.84e-07;41!UBERON:0001890;8.84e-07;41 | |||
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|short_description=p9@C5orf4 | |||
}} |
Revision as of 14:21, 13 September 2013
Short description: | p9@C5orf4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_C5orf4_5end |
Coexpression cluster: | NA |
Association with transcript: | 114bp_to_uc003lvq.2_5end |
EntrezGene: | C5orf4 |
HGNC: | 1334 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.