FFCP PHASE1:Hg19::chr6:160103621..160103639,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C107|description=CAGE_peak_at_chr6:160103621..160103639,+|id=chr6:160103621..160103639,+|ontology_enrichment_celltype=CL:0002057!6.83e-28!42;CL:0000860!3.57e-25!45;CL:0002194!1.83e-17!63;CL:0000576!1.83e-17!63;CL:0000040!1.83e-17!63;CL:0000559!1.83e-17!63;CL:0000766!1.39e-16!76;CL:0002009!1.50e-16!65;CL:0000839!2.08e-15!70;CL:0000557!5.09e-15!71;CL:0000763!6.89e-08!112;CL:0000049!6.89e-08!112;CL:0002087!5.93e-07!119;CL:0000034!8.21e-07!444;CL:0000723!9.75e-07!436|ontology_enrichment_celltype_v019=CL:0000860;3.31e-34;33!CL:0002057;3.31e-34;33!CL:0000473;3.88e-24;39!CL:0000234;3.88e-24;39!CL:0000576;4.71e-15;48!CL:0000766;1.38e-11;69!CL:0000214;1.18e-09;3!CL:0000775;1.81e-09;3!CL:0000153;6.77e-07;9!CL:0000447;6.77e-07;9!CL:0000763;7.76e-07;100|ontology_enrichment_celltype_v019_2=CL:0000860,3.69e-27,42;CL:0002057,3.69e-27,42;CL:0000473,2.07e-23,48;CL:0000234,2.07e-23,48;CL:0000766,3.25e-19,72;CL:0002194,3.67e-18,59;CL:0000576,3.67e-18,59;CL:0000040,3.67e-18,59;CL:0000559,3.67e-18,59;CL:0002009,1.74e-17,61;CL:0000839,5.72e-16,66;CL:0000557,1.08e-15,67;CL:0000763,8.80e-12,108;CL:0000049,8.80e-12,108;CL:0000214,1.29e-09,3;CL:0000775,1.59e-09,3;CL:0000738,1.03e-08,136;CL:0002087,4.76e-08,115;CL:0002031,1.32e-07,120;CL:0000048,4.48e-07,427;CL:0000153,6.31e-07,9;CL:0000447,6.31e-07,9;CL:0000723,6.71e-07,433;CL:0002032,7.02e-07,161;CL:0000837,7.02e-07,161|ontology_enrichment_development_v019=CL:0002057;1.27e-19;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!8.90e-16!167;UBERON:0002371!8.50e-14!80;UBERON:0001474!1.14e-12!86;UBERON:0002193!1.16e-12!112;UBERON:0002405!2.60e-12!115;UBERON:0004765!3.05e-12!101;UBERON:0001434!3.05e-12!101;UBERON:0002390!9.59e-12!102;UBERON:0003061!9.59e-12!102;UBERON:0000926!4.06e-09!448;UBERON:0004120!4.06e-09!448;UBERON:0006603!4.06e-09!448|ontology_enrichment_uberon_v019=UBERON:0006915;1.18e-09;3!UBERON:0007616;1.18e-09;3!UBERON:0002217;1.18e-09;3!UBERON:0002018;1.18e-09;3!UBERON:0004905;1.05e-07;8!UBERON:0000982;1.05e-07;8!UBERON:0004770;1.05e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0001434,1.01e-16,100;UBERON:0002405,3.28e-14,93;UBERON:0002204,9.91e-14,167;UBERON:0002371,1.58e-13,76;UBERON:0002193,1.75e-13,108;UBERON:0004765,9.90e-13,90;UBERON:0001474,2.39e-12,82;UBERON:0002390,1.70e-11,98;UBERON:0003061,1.70e-11,98;UBERON:0006915,1.29e-09,3;UBERON:0007616,1.29e-09,3;UBERON:0002217,1.29e-09,3;UBERON:0002018,1.29e-09,3;UBERON:0004905,1.28e-07,8;UBERON:0000982,1.28e-07,8;UBERON:0004770,1.28e-07,8|phase1_expression=0.181678379270557,0,0.140954404095971,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0.247532705920093,0,1.34465029290355,0.602694528023977,1.46062018077475,0.975865597581014,0,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0.553995408531877,0.200544447470142,0.868043482863407,0,0,0,0.290796477559129,0,0.242584061187816,0.697287110717054,2.46700732813095,0.309706370895104,3.45230870786581,2.0492856522328,2.12834006899727,3.10271112662957,0.645484683583826,2.70852973188684,0.941211697713023,0.545812300115692,0,4.59125838556354,0.320929027076094,3.19668562899521,0.989553900560148,0.398927315243264,1.27867425159808,7.83564944297177,0.56738522469114,2.4912889959823,0.75374599577023,0,1.73751075764093,3.63239701580021,0.736555271975129,5.06339819905415,0,0.212604299965044,0,0.112328631146495,0.150176892841506,0,0.570025487482497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,1.94826728407911,0,0.294605907474837,0,0,0,0,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,1.94653948121054,0,0,0,0,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0.56530794192401,0,0,0,0.258416759169329,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0.24666754841716,0,0.269421344139376,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,1.35214253015937,0.226864366320042,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0.232387885739037,0,0,0,0,0,1.38134921352481,0.464367928031979,0.721879481669586,0,0,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,0,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0,0,0.577465791044295,2.31492756288305,4.56609965363036,0,0,0.492434012174795,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0.399891964728228,0,0,0,0,0,0,0.289562613335158,0.410952645100767,0,0,0,0,0,0,0,1.54657762555539,0,0,2.24702107184155,2.99161459204025,0.414415513436035,0.12269149171914,1.00034104211935,0.271265023699736,0,0,0,0.234282829985426,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C107 | |||
|description=CAGE_peak_at_chr6:160103621..160103639,+ | |||
|id=chr6:160103621..160103639,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.83e-28!42;CL:0000860!3.57e-25!45;CL:0002194!1.83e-17!63;CL:0000576!1.83e-17!63;CL:0000040!1.83e-17!63;CL:0000559!1.83e-17!63;CL:0000766!1.39e-16!76;CL:0002009!1.50e-16!65;CL:0000839!2.08e-15!70;CL:0000557!5.09e-15!71;CL:0000763!6.89e-08!112;CL:0000049!6.89e-08!112;CL:0002087!5.93e-07!119;CL:0000034!8.21e-07!444;CL:0000723!9.75e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.31e-34;33!CL:0002057;3.31e-34;33!CL:0000473;3.88e-24;39!CL:0000234;3.88e-24;39!CL:0000576;4.71e-15;48!CL:0000766;1.38e-11;69!CL:0000214;1.18e-09;3!CL:0000775;1.81e-09;3!CL:0000153;6.77e-07;9!CL:0000447;6.77e-07;9!CL:0000763;7.76e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.69e-27,42;CL:0002057,3.69e-27,42;CL:0000473,2.07e-23,48;CL:0000234,2.07e-23,48;CL:0000766,3.25e-19,72;CL:0002194,3.67e-18,59;CL:0000576,3.67e-18,59;CL:0000040,3.67e-18,59;CL:0000559,3.67e-18,59;CL:0002009,1.74e-17,61;CL:0000839,5.72e-16,66;CL:0000557,1.08e-15,67;CL:0000763,8.80e-12,108;CL:0000049,8.80e-12,108;CL:0000214,1.29e-09,3;CL:0000775,1.59e-09,3;CL:0000738,1.03e-08,136;CL:0002087,4.76e-08,115;CL:0002031,1.32e-07,120;CL:0000048,4.48e-07,427;CL:0000153,6.31e-07,9;CL:0000447,6.31e-07,9;CL:0000723,6.71e-07,433;CL:0002032,7.02e-07,161;CL:0000837,7.02e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;1.27e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!8.90e-16!167;UBERON:0002371!8.50e-14!80;UBERON:0001474!1.14e-12!86;UBERON:0002193!1.16e-12!112;UBERON:0002405!2.60e-12!115;UBERON:0004765!3.05e-12!101;UBERON:0001434!3.05e-12!101;UBERON:0002390!9.59e-12!102;UBERON:0003061!9.59e-12!102;UBERON:0000926!4.06e-09!448;UBERON:0004120!4.06e-09!448;UBERON:0006603!4.06e-09!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;1.18e-09;3!UBERON:0007616;1.18e-09;3!UBERON:0002217;1.18e-09;3!UBERON:0002018;1.18e-09;3!UBERON:0004905;1.05e-07;8!UBERON:0000982;1.05e-07;8!UBERON:0004770;1.05e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001434,1.01e-16,100;UBERON:0002405,3.28e-14,93;UBERON:0002204,9.91e-14,167;UBERON:0002371,1.58e-13,76;UBERON:0002193,1.75e-13,108;UBERON:0004765,9.90e-13,90;UBERON:0001474,2.39e-12,82;UBERON:0002390,1.70e-11,98;UBERON:0003061,1.70e-11,98;UBERON:0006915,1.29e-09,3;UBERON:0007616,1.29e-09,3;UBERON:0002217,1.29e-09,3;UBERON:0002018,1.29e-09,3;UBERON:0004905,1.28e-07,8;UBERON:0000982,1.28e-07,8;UBERON:0004770,1.28e-07,8 | |||
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|short_description=p@chr6:160103621..160103639,+ | |||
}} |
Revision as of 19:06, 13 September 2013
Short description: | p@chr6:160103621..160103639, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:160103621..160103639, + |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.69e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.69e-27 | 42 |
defensive cell | 2.07e-23 | 48 |
phagocyte | 2.07e-23 | 48 |
myeloid leukocyte | 3.25e-19 | 72 |
monopoietic cell | 3.67e-18 | 59 |
monocyte | 3.67e-18 | 59 |
monoblast | 3.67e-18 | 59 |
promonocyte | 3.67e-18 | 59 |
macrophage dendritic cell progenitor | 1.74e-17 | 61 |
myeloid lineage restricted progenitor cell | 5.72e-16 | 66 |
granulocyte monocyte progenitor cell | 1.08e-15 | 67 |
myeloid cell | 8.80e-12 | 108 |
common myeloid progenitor | 8.80e-12 | 108 |
synovial cell | 1.29e-09 | 3 |
neutrophil | 1.59e-09 | 3 |
leukocyte | 1.03e-08 | 136 |
nongranular leukocyte | 4.76e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 1.32e-07 | 120 |
multi fate stem cell | 4.48e-07 | 427 |
GAG secreting cell | 6.31e-07 | 9 |
carbohydrate secreting cell | 6.31e-07 | 9 |
somatic stem cell | 6.71e-07 | 433 |
hematopoietic oligopotent progenitor cell | 7.02e-07 | 161 |
hematopoietic multipotent progenitor cell | 7.02e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
skeletal system | 1.01e-16 | 100 |
immune system | 3.28e-14 | 93 |
musculoskeletal system | 9.91e-14 | 167 |
bone marrow | 1.58e-13 | 76 |
hemolymphoid system | 1.75e-13 | 108 |
skeletal element | 9.90e-13 | 90 |
bone element | 2.39e-12 | 82 |
hematopoietic system | 1.70e-11 | 98 |
blood island | 1.70e-11 | 98 |
stratified squamous epithelium | 1.29e-09 | 3 |
layer of synovial tissue | 1.29e-09 | 3 |
synovial joint | 1.29e-09 | 3 |
synovial membrane of synovial joint | 1.29e-09 | 3 |
articulation | 1.28e-07 | 8 |
skeletal joint | 1.28e-07 | 8 |
articular system | 1.28e-07 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.