FFCP PHASE1:Hg19::chr6:169562893..169562942,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=76bp_to_ENST00000439703_5end|coexpression_cluster_id=C2854|description=CAGE_peak_1_at_ENST00000439703_5end|id=chr6:169562893..169562942,-|ontology_enrichment_celltype=CL:0000055!1.19e-25!180;CL:0000057!2.13e-24!75;CL:0000048!1.09e-09!430;CL:0000187!1.37e-09!54;CL:0002620!1.75e-09!23;CL:0000680!1.78e-09!57;CL:0000056!1.78e-09!57;CL:0000355!1.78e-09!57;CL:0000723!5.34e-09!436;CL:0002334!1.68e-08!12;CL:0000183!1.75e-08!59;CL:0002494!1.77e-08!16;CL:0000034!3.97e-08!444;CL:0000393!1.38e-07!60;CL:0000211!1.38e-07!60;CL:0000192!4.02e-07!42;CL:0000514!4.02e-07!42;CL:0000359!8.51e-07!32|ontology_enrichment_celltype_v019=CL:0000359;1.12e-08;32!CL:0000077;1.17e-08;19!CL:0002620;2.86e-08;23!CL:0002494;6.51e-08;16!CL:0002334;3.16e-07;12|ontology_enrichment_celltype_v019_2=CL:0000057,2.13e-15,76;CL:0000359,6.28e-09,32;CL:0000048,9.69e-09,427;CL:0000077,1.06e-08,19;CL:0000222,1.66e-08,121;CL:0000723,2.59e-08,433;CL:0002620,2.64e-08,23;CL:0000680,3.15e-08,58;CL:0000056,3.15e-08,58;CL:0000355,3.15e-08,58;CL:0000187,6.23e-08,55;CL:0002494,7.25e-08,16;CL:0000034,9.11e-08,441;CL:0000192,3.59e-07,43;CL:0000514,3.59e-07,43;CL:0002334,3.87e-07,12|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000914!4.63e-10!83;UBERON:0002329!4.63e-10!83;UBERON:0003077!4.63e-10!83;UBERON:0003059!4.63e-10!83;UBERON:0007282!4.63e-10!83;UBERON:0009618!4.63e-10!83;UBERON:0007285!4.63e-10!83;UBERON:0001134!2.01e-09!61;UBERON:0002036!2.01e-09!61;UBERON:0003082!2.01e-09!61;UBERON:0000948!6.77e-09!24;UBERON:0005498!6.77e-09!24;UBERON:0004140!6.77e-09!24;UBERON:0009881!6.77e-09!24;UBERON:0004141!6.77e-09!24;UBERON:0003084!6.77e-09!24;UBERON:0007005!6.77e-09!24;UBERON:0004139!6.77e-09!24;UBERON:0004291!6.77e-09!24;UBERON:0007100!7.07e-09!27;UBERON:0004290!7.60e-09!70;UBERON:0002385!9.23e-09!63;UBERON:0001015!9.23e-09!63;UBERON:0000383!9.23e-09!63;UBERON:0000486!1.37e-08!82;UBERON:0003102!7.65e-07!95|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0007524,3.68e-08,73;UBERON:0001134,4.67e-08,62;UBERON:0002036,4.67e-08,62;UBERON:0003082,4.67e-08,62;UBERON:0000948,8.55e-08,24;UBERON:0005498,8.55e-08,24;UBERON:0004140,8.55e-08,24;UBERON:0009881,8.55e-08,24;UBERON:0004141,8.55e-08,24;UBERON:0003084,8.55e-08,24;UBERON:0007005,8.55e-08,24;UBERON:0004139,8.55e-08,24;UBERON:0004291,8.55e-08,24;UBERON:0002329,8.73e-08,71;UBERON:0003059,8.73e-08,71;UBERON:0007282,8.73e-08,71;UBERON:0004290,8.73e-08,71;UBERON:0009618,8.73e-08,71;UBERON:0002385,1.29e-07,64;UBERON:0001015,1.29e-07,64;UBERON:0000383,1.29e-07,64;UBERON:0003077,1.38e-07,72;UBERON:0007285,1.38e-07,72;UBERON:0001637,1.59e-07,42;UBERON:0003509,1.59e-07,42;UBERON:0004572,1.59e-07,42;UBERON:0004573,2.31e-07,33;UBERON:0004571,2.31e-07,33;UBERON:0000486,4.26e-07,83|phase1_expression=3.63356758541113,2.35510576280081,2.81908808191942,0,1.34088328328186,2.61701557230111,2.53299878168311,1.89515962028049,0,0,0,0,0,0.37129905888014,1.32558950291166,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1903433156981,0,1.91793842765295,0,0.50133791063589,0.289693037921647,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,11.4303548889923,3.03913227994991,0.397227542439656,0.860509862246441,1.41867352879343,1.12135520028461,0,0.74000264525148,0.311211035399766,1.21239604862719,0.653847612453835,0.151357427644931,1.15235184896,0.70296429550139,0.936480230490962,1.71141546463335,4.78235777765763,0,0,0,2.65400422631361,0.122834317311768,3.92637968467909,0,0.741800787835671,0,4.31170885089743,0,0.125118519871964,1.38532057742091,1.31693286264251,0.919463387397059,0.150238058906597,1.13432183160021,0.358779271377724,1.2813443329114,5.51022943014861,0.600182192168805,0.618315175430633,4.63752972082133,15.0754653628588,0.168776332241266,1.26668106709558,1.26216887122057,3.31379635112278,0.646584227275248,1.77504796258307,3.42557133973977,3.05209066158878,0.57978255948989,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0.928735856063958,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,4.15973914111831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,7.49775951395111,0,0.845302752556,0.797814349754612,1.04007436911366,0,0,0.266422179016099,0.142977993658148,0,2.46972101034231,2.93162565864362,0,0.791951872933429,0,0,0,0,0,0,4.55287225434007,6.89171615004683,0,0,13.1504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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=76bp_to_ENST00000439703_5end | |||
|coexpression_cluster_id=C2854 | |||
|description=CAGE_peak_1_at_ENST00000439703_5end | |||
|id=chr6:169562893..169562942,- | |||
|ontology_enrichment_celltype=CL:0000055!1.19e-25!180;CL:0000057!2.13e-24!75;CL:0000048!1.09e-09!430;CL:0000187!1.37e-09!54;CL:0002620!1.75e-09!23;CL:0000680!1.78e-09!57;CL:0000056!1.78e-09!57;CL:0000355!1.78e-09!57;CL:0000723!5.34e-09!436;CL:0002334!1.68e-08!12;CL:0000183!1.75e-08!59;CL:0002494!1.77e-08!16;CL:0000034!3.97e-08!444;CL:0000393!1.38e-07!60;CL:0000211!1.38e-07!60;CL:0000192!4.02e-07!42;CL:0000514!4.02e-07!42;CL:0000359!8.51e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.12e-08;32!CL:0000077;1.17e-08;19!CL:0002620;2.86e-08;23!CL:0002494;6.51e-08;16!CL:0002334;3.16e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.13e-15,76;CL:0000359,6.28e-09,32;CL:0000048,9.69e-09,427;CL:0000077,1.06e-08,19;CL:0000222,1.66e-08,121;CL:0000723,2.59e-08,433;CL:0002620,2.64e-08,23;CL:0000680,3.15e-08,58;CL:0000056,3.15e-08,58;CL:0000355,3.15e-08,58;CL:0000187,6.23e-08,55;CL:0002494,7.25e-08,16;CL:0000034,9.11e-08,441;CL:0000192,3.59e-07,43;CL:0000514,3.59e-07,43;CL:0002334,3.87e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.63e-10!83;UBERON:0002329!4.63e-10!83;UBERON:0003077!4.63e-10!83;UBERON:0003059!4.63e-10!83;UBERON:0007282!4.63e-10!83;UBERON:0009618!4.63e-10!83;UBERON:0007285!4.63e-10!83;UBERON:0001134!2.01e-09!61;UBERON:0002036!2.01e-09!61;UBERON:0003082!2.01e-09!61;UBERON:0000948!6.77e-09!24;UBERON:0005498!6.77e-09!24;UBERON:0004140!6.77e-09!24;UBERON:0009881!6.77e-09!24;UBERON:0004141!6.77e-09!24;UBERON:0003084!6.77e-09!24;UBERON:0007005!6.77e-09!24;UBERON:0004139!6.77e-09!24;UBERON:0004291!6.77e-09!24;UBERON:0007100!7.07e-09!27;UBERON:0004290!7.60e-09!70;UBERON:0002385!9.23e-09!63;UBERON:0001015!9.23e-09!63;UBERON:0000383!9.23e-09!63;UBERON:0000486!1.37e-08!82;UBERON:0003102!7.65e-07!95 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,3.68e-08,73;UBERON:0001134,4.67e-08,62;UBERON:0002036,4.67e-08,62;UBERON:0003082,4.67e-08,62;UBERON:0000948,8.55e-08,24;UBERON:0005498,8.55e-08,24;UBERON:0004140,8.55e-08,24;UBERON:0009881,8.55e-08,24;UBERON:0004141,8.55e-08,24;UBERON:0003084,8.55e-08,24;UBERON:0007005,8.55e-08,24;UBERON:0004139,8.55e-08,24;UBERON:0004291,8.55e-08,24;UBERON:0002329,8.73e-08,71;UBERON:0003059,8.73e-08,71;UBERON:0007282,8.73e-08,71;UBERON:0004290,8.73e-08,71;UBERON:0009618,8.73e-08,71;UBERON:0002385,1.29e-07,64;UBERON:0001015,1.29e-07,64;UBERON:0000383,1.29e-07,64;UBERON:0003077,1.38e-07,72;UBERON:0007285,1.38e-07,72;UBERON:0001637,1.59e-07,42;UBERON:0003509,1.59e-07,42;UBERON:0004572,1.59e-07,42;UBERON:0004573,2.31e-07,33;UBERON:0004571,2.31e-07,33;UBERON:0000486,4.26e-07,83 | |||
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| |||
|short_description=p1@ENST00000439703 | |||
}} |
Revision as of 19:25, 13 September 2013
Short description: | p1@ENST00000439703 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000439703_5end |
Coexpression cluster: | C2854_mesothelioma_Smooth_liposarcoma_papillary_mesodermal_mesenchymal_Olfactory |
Association with transcript: | 76bp_to_ENST00000439703_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.13e-15 | 76 |
vascular associated smooth muscle cell | 6.28e-09 | 32 |
multi fate stem cell | 9.69e-09 | 427 |
mesothelial cell | 1.06e-08 | 19 |
mesodermal cell | 1.66e-08 | 121 |
somatic stem cell | 2.59e-08 | 433 |
skin fibroblast | 2.64e-08 | 23 |
muscle precursor cell | 3.15e-08 | 58 |
myoblast | 3.15e-08 | 58 |
multi-potent skeletal muscle stem cell | 3.15e-08 | 58 |
muscle cell | 6.23e-08 | 55 |
cardiocyte | 7.25e-08 | 16 |
stem cell | 9.11e-08 | 441 |
smooth muscle cell | 3.59e-07 | 43 |
smooth muscle myoblast | 3.59e-07 | 43 |
preadipocyte | 3.87e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 3.68e-08 | 73 |
skeletal muscle tissue | 4.67e-08 | 62 |
striated muscle tissue | 4.67e-08 | 62 |
myotome | 4.67e-08 | 62 |
heart | 8.55e-08 | 24 |
primitive heart tube | 8.55e-08 | 24 |
primary heart field | 8.55e-08 | 24 |
anterior lateral plate mesoderm | 8.55e-08 | 24 |
heart tube | 8.55e-08 | 24 |
heart primordium | 8.55e-08 | 24 |
cardiac mesoderm | 8.55e-08 | 24 |
cardiogenic plate | 8.55e-08 | 24 |
heart rudiment | 8.55e-08 | 24 |
somite | 8.73e-08 | 71 |
presomitic mesoderm | 8.73e-08 | 71 |
presumptive segmental plate | 8.73e-08 | 71 |
dermomyotome | 8.73e-08 | 71 |
trunk paraxial mesoderm | 8.73e-08 | 71 |
muscle tissue | 1.29e-07 | 64 |
musculature | 1.29e-07 | 64 |
musculature of body | 1.29e-07 | 64 |
paraxial mesoderm | 1.38e-07 | 72 |
presumptive paraxial mesoderm | 1.38e-07 | 72 |
artery | 1.59e-07 | 42 |
arterial blood vessel | 1.59e-07 | 42 |
arterial system | 1.59e-07 | 42 |
systemic artery | 2.31e-07 | 33 |
systemic arterial system | 2.31e-07 | 33 |
multilaminar epithelium | 4.26e-07 | 83 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.