FFCP PHASE1:Hg19::chr7:148844581..148844606,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57541 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18373 | |||
|TSSclassifier=S | |||
|UniProt=Q8TD17 | |||
|association_with_transcript=13bp_to_ENST00000475153_5end | |||
|description=CAGE_peak_2_at_ZNF398_5end | |||
|id=chr7:148844581..148844606,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;8.57e-07;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.63e-07;10!UBERON:0005564;4.63e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.06e-15!82;UBERON:0005743!2.51e-14!86;UBERON:0000073!8.70e-14!94;UBERON:0001016!8.70e-14!94;UBERON:0000955!2.74e-11!69;UBERON:0006238!2.74e-11!69;UBERON:0001049!3.13e-11!57;UBERON:0005068!3.13e-11!57;UBERON:0006241!3.13e-11!57;UBERON:0007135!3.13e-11!57;UBERON:0004121!4.76e-11!169;UBERON:0000924!5.76e-11!173;UBERON:0006601!5.76e-11!173;UBERON:0002616!2.38e-09!59;UBERON:0002780!5.25e-09!41;UBERON:0001890!5.25e-09!41;UBERON:0006240!5.25e-09!41;UBERON:0003080!6.45e-09!42;UBERON:0002020!8.72e-09!34;UBERON:0003528!8.72e-09!34;UBERON:0001893!2.21e-08!34;UBERON:0007023!3.07e-08!115;UBERON:0002791!5.63e-08!33;UBERON:0001869!5.99e-08!32;UBERON:0000153!8.94e-08!129;UBERON:0007811!8.94e-08!129;UBERON:0002619!9.64e-08!22;UBERON:0000033!9.86e-08!123;UBERON:0001950!1.63e-07!20;UBERON:0003075!2.74e-07!86;UBERON:0007284!2.74e-07!86;UBERON:0002346!3.80e-07!90;UBERON:0003056!4.12e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;2.13e-09;49!UBERON:0001950;5.58e-09;20!UBERON:0002619;9.61e-09;22!UBERON:0003528;1.65e-07;34!UBERON:0002020;1.65e-07;34!UBERON:0001869;3.87e-07;32!UBERON:0000956;4.49e-07;25!UBERON:0000203;4.49e-07;25!UBERON:0002791;5.65e-07;32!UBERON:0002780;8.67e-07;41!UBERON:0001890;8.67e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.48e-16,81;UBERON:0001016,1.05e-15,89;UBERON:0001049,6.45e-13,56;UBERON:0005068,6.45e-13,56;UBERON:0006241,6.45e-13,56;UBERON:0007135,6.45e-13,56;UBERON:0000955,1.51e-11,68;UBERON:0006238,1.51e-11,68;UBERON:0004121,3.33e-11,171;UBERON:0000924,3.33e-11,171;UBERON:0006601,3.33e-11,171;UBERON:0000073,3.87e-11,53;UBERON:0002616,3.87e-11,53;UBERON:0010371,4.93e-10,104;UBERON:0011216,4.96e-10,223;UBERON:0003528,7.25e-10,34;UBERON:0002020,7.25e-10,34;UBERON:0002780,1.05e-09,41;UBERON:0001890,1.05e-09,41;UBERON:0003080,1.05e-09,41;UBERON:0006240,1.05e-09,41;UBERON:0001950,1.08e-09,20;UBERON:0003075,1.16e-09,82;UBERON:0007284,1.16e-09,82;UBERON:0002619,1.68e-09,22;UBERON:0002346,3.22e-09,86;UBERON:0001893,8.44e-09,34;UBERON:0002791,1.02e-08,32;UBERON:0001869,1.07e-08,32;UBERON:0003056,6.70e-08,61;UBERON:0000956,1.03e-07,25;UBERON:0000203,1.03e-07,25 | |||
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| |||
|short_description=p2@ZNF398 | |||
}} |
Revision as of 23:51, 13 September 2013
Short description: | p2@ZNF398 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ZNF398_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_ENST00000475153_5end |
EntrezGene: | ZNF398 |
HGNC: | 18373 |
UniProt: | Q8TD17 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.48e-16 | 81 |
nervous system | 1.05e-15 | 89 |
neural tube | 6.45e-13 | 56 |
neural rod | 6.45e-13 | 56 |
future spinal cord | 6.45e-13 | 56 |
neural keel | 6.45e-13 | 56 |
brain | 1.51e-11 | 68 |
future brain | 1.51e-11 | 68 |
ectoderm-derived structure | 3.33e-11 | 171 |
ectoderm | 3.33e-11 | 171 |
presumptive ectoderm | 3.33e-11 | 171 |
regional part of nervous system | 3.87e-11 | 53 |
regional part of brain | 3.87e-11 | 53 |
ecto-epithelium | 4.93e-10 | 104 |
organ system subdivision | 4.96e-10 | 223 |
brain grey matter | 7.25e-10 | 34 |
gray matter | 7.25e-10 | 34 |
regional part of forebrain | 1.05e-09 | 41 |
forebrain | 1.05e-09 | 41 |
anterior neural tube | 1.05e-09 | 41 |
future forebrain | 1.05e-09 | 41 |
neocortex | 1.08e-09 | 20 |
neural plate | 1.16e-09 | 82 |
presumptive neural plate | 1.16e-09 | 82 |
regional part of cerebral cortex | 1.68e-09 | 22 |
neurectoderm | 3.22e-09 | 86 |
telencephalon | 8.44e-09 | 34 |
regional part of telencephalon | 1.02e-08 | 32 |
cerebral hemisphere | 1.07e-08 | 32 |
pre-chordal neural plate | 6.70e-08 | 61 |
cerebral cortex | 1.03e-07 | 25 |
pallium | 1.03e-07 | 25 |
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