FFCP PHASE1:Mm9::chr2:58013483..58013521,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=227929|HGNC=|MCL_coexpression_id=576|UniProt=|association_with_transcript=-415bp_to_ENSMUST00000151169_5end|description=CAGE_peak_3_at_Cytip_5end|id=chr2:58013483..58013521,-|ontology_enrichment_celltype=CL:0000988!2.75e-24!32;CL:0002032!2.75e-24!32;CL:0000037!2.75e-24!32;CL:0000566!2.75e-24!32;CL:0000837!2.75e-24!32;CL:0000838!1.33e-17!12;CL:0002031!2.70e-17!25;CL:0002320!3.94e-16!46;CL:0000134!3.94e-16!46;CL:0000084!4.92e-16!11;CL:0000827!4.92e-16!11;CL:0000542!5.50e-16!13;CL:0000051!5.50e-16!13;CL:0000219!7.21e-14!54;CL:0000791!1.29e-13!9;CL:0000789!1.29e-13!9;CL:0002420!1.29e-13!9;CL:0002419!1.29e-13!9;CL:0000790!1.29e-13!9;CL:0000624!3.62e-12!8;CL:0000738!1.93e-11!17;CL:0002087!1.93e-11!17;CL:0000049!2.99e-10!19;CL:0000553!6.50e-10!6;CL:0000556!6.50e-10!6;CL:0000893!3.19e-09!6;CL:0002489!3.19e-09!6;CL:0000898!3.19e-09!6;CL:0000809!3.19e-09!6;CL:0000810!3.19e-09!6;CL:0000895!3.19e-09!6;CL:0000808!3.19e-09!6;CL:0000894!3.19e-09!6;CL:0000806!3.19e-09!6;CL:0000807!3.19e-09!6;CL:0000805!3.19e-09!6;CL:0002425!3.19e-09!6;CL:0002436!3.19e-09!6;CL:0002427!3.19e-09!6;CL:0002428!3.19e-09!6;CL:0002429!3.19e-09!6;CL:0002433!3.19e-09!6;CL:0002431!3.19e-09!6;CL:0002432!3.19e-09!6;CL:0000063!4.74e-09!66;CL:0000034!6.60e-09!97;CL:0000723!2.20e-07!91;CL:0000048!2.20e-07!91;CL:0000763!7.70e-07!16|ontology_enrichment_celltype_v019_2=CL:0000988,2.91e-35,32;CL:0002032,2.91e-35,32;CL:0000037,2.91e-35,32;CL:0000837,2.91e-35,32;CL:0002320,1.59e-25,46;CL:0000134,1.59e-25,46;CL:0002031,7.07e-23,25;CL:0000838,4.56e-22,12;CL:0000219,4.81e-21,54;CL:0000542,3.17e-20,13;CL:0000051,3.17e-20,13;CL:0000084,2.32e-19,11;CL:0000827,2.32e-19,11;CL:0000034,9.20e-18,97;CL:0000049,2.68e-16,19;CL:0000791,4.52e-15,9;CL:0000789,4.52e-15,9;CL:0002420,4.52e-15,9;CL:0002419,4.52e-15,9;CL:0000790,4.52e-15,9;CL:0000738,5.06e-15,17;CL:0002087,5.06e-15,17;CL:0000723,2.06e-14,91;CL:0000048,2.06e-14,91;CL:0000624,1.30e-12,8;CL:0000553,3.41e-12,6;CL:0000556,3.41e-12,6;CL:0000763,2.79e-10,16;CL:0000050,5.12e-08,9;CL:0000893,8.31e-08,6;CL:0002489,8.31e-08,6;CL:0000898,8.31e-08,6;CL:0000809,8.31e-08,6;CL:0000810,8.31e-08,6;CL:0000895,8.31e-08,6;CL:0000808,8.31e-08,6;CL:0000894,8.31e-08,6;CL:0000806,8.31e-08,6;CL:0000807,8.31e-08,6;CL:0000805,8.31e-08,6;CL:0002425,8.31e-08,6;CL:0002436,8.31e-08,6;CL:0002427,8.31e-08,6;CL:0002428,8.31e-08,6;CL:0002429,8.31e-08,6;CL:0002433,8.31e-08,6;CL:0002431,8.31e-08,6;CL:0002432,8.31e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.57e-08,3;DOID:4045,1.57e-08,3|ontology_enrichment_uberon=UBERON:0002384!3.94e-16!46;UBERON:0002193!3.41e-14!48;UBERON:0002390!1.30e-11!45;UBERON:0003061!1.30e-11!45;UBERON:0002371!1.84e-08!16;UBERON:0002405!2.42e-08!70|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.59e-25,46;UBERON:0002371,7.52e-13,16;UBERON:0002204,3.64e-10,32;UBERON:0001474,6.40e-09,22;UBERON:0004765,6.40e-09,22;UBERON:0001434,6.40e-09,22;UBERON:0002193,1.39e-08,48;UBERON:0002405,1.39e-08,48;UBERON:0002390,5.15e-08,45;UBERON:0003061,5.15e-08,45|phase1_expression=0,0,0,0,0,0,0,15.6239221364307,4.92760527530834,3.27690336850791,0.171217968225505,0.8774937489487,10.6144452557348,6.55653018142481,1.33243904726265,2.22722794128809,0.699561878128147,22.0823515750766,17.4135330679288,23.7658205006897,0.0850432901510698,1.68794617041505,1.82839852397255,0.319984845586813,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,3.76678467663217,3.1253413780952,2.09409497589519,12.9410927366823,18.442228093878,4.36959317728038,0.125896817975577,0,0,0,0,0,0,0,0,13.5903910906766,5.07753499407941,7.73015738027667,0,0,0,0,0,0,0,0,0,1.97773272513395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37863096666592,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.55362730188303,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,8.38705871541442,6.59893004092748,5.71816021828791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51106593656617,3.86021860672073,3.6941254921427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0.491589944147214,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0,0,0,0,0,0,0.341741761595705,0,0,0,0.136694227721025,0,8.66889992968662,12.0358248998346,7.87739850685216,0,0,0,0,0,0,0,0,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0.100966449948148,0,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@Cytip}} | ||
|EntrezGene=227929 | |||
|HGNC= | |||
|MCL_coexpression_id=576 | |||
|UniProt= | |||
|association_with_transcript=-415bp_to_ENSMUST00000151169_5end | |||
|description=CAGE_peak_3_at_Cytip_5end | |||
|id=chr2:58013483..58013521,- | |||
|ontology_enrichment_celltype=CL:0000988!2.75e-24!32;CL:0002032!2.75e-24!32;CL:0000037!2.75e-24!32;CL:0000566!2.75e-24!32;CL:0000837!2.75e-24!32;CL:0000838!1.33e-17!12;CL:0002031!2.70e-17!25;CL:0002320!3.94e-16!46;CL:0000134!3.94e-16!46;CL:0000084!4.92e-16!11;CL:0000827!4.92e-16!11;CL:0000542!5.50e-16!13;CL:0000051!5.50e-16!13;CL:0000219!7.21e-14!54;CL:0000791!1.29e-13!9;CL:0000789!1.29e-13!9;CL:0002420!1.29e-13!9;CL:0002419!1.29e-13!9;CL:0000790!1.29e-13!9;CL:0000624!3.62e-12!8;CL:0000738!1.93e-11!17;CL:0002087!1.93e-11!17;CL:0000049!2.99e-10!19;CL:0000553!6.50e-10!6;CL:0000556!6.50e-10!6;CL:0000893!3.19e-09!6;CL:0002489!3.19e-09!6;CL:0000898!3.19e-09!6;CL:0000809!3.19e-09!6;CL:0000810!3.19e-09!6;CL:0000895!3.19e-09!6;CL:0000808!3.19e-09!6;CL:0000894!3.19e-09!6;CL:0000806!3.19e-09!6;CL:0000807!3.19e-09!6;CL:0000805!3.19e-09!6;CL:0002425!3.19e-09!6;CL:0002436!3.19e-09!6;CL:0002427!3.19e-09!6;CL:0002428!3.19e-09!6;CL:0002429!3.19e-09!6;CL:0002433!3.19e-09!6;CL:0002431!3.19e-09!6;CL:0002432!3.19e-09!6;CL:0000063!4.74e-09!66;CL:0000034!6.60e-09!97;CL:0000723!2.20e-07!91;CL:0000048!2.20e-07!91;CL:0000763!7.70e-07!16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.91e-35,32;CL:0002032,2.91e-35,32;CL:0000037,2.91e-35,32;CL:0000837,2.91e-35,32;CL:0002320,1.59e-25,46;CL:0000134,1.59e-25,46;CL:0002031,7.07e-23,25;CL:0000838,4.56e-22,12;CL:0000219,4.81e-21,54;CL:0000542,3.17e-20,13;CL:0000051,3.17e-20,13;CL:0000084,2.32e-19,11;CL:0000827,2.32e-19,11;CL:0000034,9.20e-18,97;CL:0000049,2.68e-16,19;CL:0000791,4.52e-15,9;CL:0000789,4.52e-15,9;CL:0002420,4.52e-15,9;CL:0002419,4.52e-15,9;CL:0000790,4.52e-15,9;CL:0000738,5.06e-15,17;CL:0002087,5.06e-15,17;CL:0000723,2.06e-14,91;CL:0000048,2.06e-14,91;CL:0000624,1.30e-12,8;CL:0000553,3.41e-12,6;CL:0000556,3.41e-12,6;CL:0000763,2.79e-10,16;CL:0000050,5.12e-08,9;CL:0000893,8.31e-08,6;CL:0002489,8.31e-08,6;CL:0000898,8.31e-08,6;CL:0000809,8.31e-08,6;CL:0000810,8.31e-08,6;CL:0000895,8.31e-08,6;CL:0000808,8.31e-08,6;CL:0000894,8.31e-08,6;CL:0000806,8.31e-08,6;CL:0000807,8.31e-08,6;CL:0000805,8.31e-08,6;CL:0002425,8.31e-08,6;CL:0002436,8.31e-08,6;CL:0002427,8.31e-08,6;CL:0002428,8.31e-08,6;CL:0002429,8.31e-08,6;CL:0002433,8.31e-08,6;CL:0002431,8.31e-08,6;CL:0002432,8.31e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.57e-08,3;DOID:4045,1.57e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002384!3.94e-16!46;UBERON:0002193!3.41e-14!48;UBERON:0002390!1.30e-11!45;UBERON:0003061!1.30e-11!45;UBERON:0002371!1.84e-08!16;UBERON:0002405!2.42e-08!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.59e-25,46;UBERON:0002371,7.52e-13,16;UBERON:0002204,3.64e-10,32;UBERON:0001474,6.40e-09,22;UBERON:0004765,6.40e-09,22;UBERON:0001434,6.40e-09,22;UBERON:0002193,1.39e-08,48;UBERON:0002405,1.39e-08,48;UBERON:0002390,5.15e-08,45;UBERON:0003061,5.15e-08,45 | |||
|phase1_expression=0,0,0,0,0,0,0,15.6239221364307,4.92760527530834,3.27690336850791,0.171217968225505,0.8774937489487,10.6144452557348,6.55653018142481,1.33243904726265,2.22722794128809,0.699561878128147,22.0823515750766,17.4135330679288,23.7658205006897,0.0850432901510698,1.68794617041505,1.82839852397255,0.319984845586813,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,3.76678467663217,3.1253413780952,2.09409497589519,12.9410927366823,18.442228093878,4.36959317728038,0.125896817975577,0,0,0,0,0,0,0,0,13.5903910906766,5.07753499407941,7.73015738027667,0,0,0,0,0,0,0,0,0,1.97773272513395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37863096666592,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.55362730188303,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,8.38705871541442,6.59893004092748,5.71816021828791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51106593656617,3.86021860672073,3.6941254921427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0.491589944147214,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0,0,0,0,0,0,0.341741761595705,0,0,0,0.136694227721025,0,8.66889992968662,12.0358248998346,7.87739850685216,0,0,0,0,0,0,0,0,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0.100966449948148,0,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@Cytip | |||
}} |
Revision as of 00:11, 14 September 2013
Short description: | p3@Cytip |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cytip_5end |
Coexpression cluster: | MCL_coexpression_mm9:576 |
Association with transcript: | -415bp_to_ENSMUST00000151169_5end |
EntrezGene: | Cytip |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.59e-25 | 46 |
bone marrow | 7.52e-13 | 16 |
musculoskeletal system | 3.64e-10 | 32 |
bone element | 6.40e-09 | 22 |
skeletal element | 6.40e-09 | 22 |
skeletal system | 6.40e-09 | 22 |
hemolymphoid system | 1.39e-08 | 48 |
immune system | 1.39e-08 | 48 |
hematopoietic system | 5.15e-08 | 45 |
blood island | 5.15e-08 | 45 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.57e-08 | 3 |
muscle cancer | 1.57e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.