FFCP PHASE1:Mm9::chr3:103379198..103379209,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=54524|HGNC=|MCL_coexpression_id=845|UniProt=Q9R0N8,Q05BE2,D6RHQ5,Q6P1H9|association_with_transcript=0bp_to_ENSMUST00000090697,ENSMUST00000098785,ENSMUST00000132325,NM_018800,uc008qsy.1,uc008qsz.1,uc008qta.1_5end|description=CAGE_peak_2_at_Syt6_5end|id=chr3:103379198..103379209,+|ontology_enrichment_celltype=CL:0000540!3.49e-22!33;CL:0000047!3.49e-22!33;CL:0000031!3.49e-22!33;CL:0000404!3.49e-22!33;CL:0000221!6.43e-20!44;CL:0000133!6.43e-20!44;CL:0002319!5.11e-19!43;CL:0000393!5.76e-17!39;CL:0000211!5.76e-17!39;CL:0000055!1.32e-14!50;CL:0000117!3.64e-13!23;CL:0000337!3.64e-13!23;CL:0000107!2.55e-10!9;CL:0002321!4.83e-08!70;CL:0000220!4.83e-08!70;CL:0002609!1.45e-07!6|ontology_enrichment_celltype_v019_2=CL:0000107,1.84e-26,9;CL:0000540,2.98e-26,33;CL:0000047,2.98e-26,33;CL:0000031,2.98e-26,33;CL:0000404,2.98e-26,33;CL:0000393,1.32e-21,39;CL:0000211,1.32e-21,39;CL:0000221,4.92e-21,44;CL:0000133,4.92e-21,44;CL:0002319,3.14e-19,43;CL:0002609,1.26e-18,6;CL:0002321,1.10e-11,70;CL:0002608,1.43e-10,3;CL:0000117,4.14e-09,23;CL:0000337,4.14e-09,23;CL:0000723,4.92e-07,91;CL:0000048,4.92e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.11e-24!75;UBERON:0001016!2.11e-24!75;UBERON:0001017!2.75e-23!73;UBERON:0005743!2.75e-23!73;UBERON:0004121!4.37e-17!102;UBERON:0000924!4.37e-17!102;UBERON:0006601!4.37e-17!102;UBERON:0002020!5.89e-16!34;UBERON:0002791!4.18e-14!29;UBERON:0003528!4.18e-14!29;UBERON:0001893!4.18e-14!29;UBERON:0001049!5.89e-14!52;UBERON:0005068!5.89e-14!52;UBERON:0006241!5.89e-14!52;UBERON:0007135!5.89e-14!52;UBERON:0000955!2.80e-13!50;UBERON:0006238!2.80e-13!50;UBERON:0003080!3.69e-13!40;UBERON:0000033!7.88e-13!63;UBERON:0002346!1.02e-12!71;UBERON:0003075!1.02e-12!71;UBERON:0007284!1.02e-12!71;UBERON:0002780!1.66e-12!39;UBERON:0001890!1.66e-12!39;UBERON:0006240!1.66e-12!39;UBERON:0002616!1.75e-12!49;UBERON:0003056!3.18e-12!49;UBERON:0000010!4.44e-11!11;UBERON:0002410!2.55e-10!9;UBERON:0000956!1.40e-08!21;UBERON:0001869!1.40e-08!21;UBERON:0000203!1.40e-08!21;UBERON:0002420!3.34e-07!8;UBERON:0007245!3.34e-07!8;UBERON:0010009!3.34e-07!8;UBERON:0010011!3.34e-07!8;UBERON:0000454!3.34e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.84e-26,9;UBERON:0001017,9.90e-25,73;UBERON:0001016,6.24e-24,75;UBERON:0000010,2.34e-21,11;UBERON:0004121,1.94e-19,95;UBERON:0000924,1.94e-19,95;UBERON:0006601,1.94e-19,95;UBERON:0003528,4.38e-17,29;UBERON:0002791,4.38e-17,29;UBERON:0001893,4.38e-17,29;UBERON:0002780,8.33e-16,39;UBERON:0001890,8.33e-16,39;UBERON:0006240,8.33e-16,39;UBERON:0003080,2.52e-15,40;UBERON:0000955,1.90e-14,47;UBERON:0006238,1.90e-14,47;UBERON:0002020,3.87e-14,34;UBERON:0002616,6.96e-13,46;UBERON:0002346,1.32e-12,64;UBERON:0003075,1.32e-12,64;UBERON:0007284,1.32e-12,64;UBERON:0000956,1.70e-12,21;UBERON:0001869,1.70e-12,21;UBERON:0000203,1.70e-12,21;UBERON:0000073,5.71e-12,54;UBERON:0010371,6.20e-12,73;UBERON:0003056,6.89e-12,49;UBERON:0001049,5.23e-11,52;UBERON:0005068,5.23e-11,52;UBERON:0006241,5.23e-11,52;UBERON:0007135,5.23e-11,52;UBERON:0000011,2.34e-10,3;UBERON:0010313,7.58e-10,3;UBERON:0002342,7.58e-10,3;UBERON:0002005,7.58e-10,3;UBERON:0005428,7.58e-10,3;UBERON:0005062,7.58e-10,3;UBERON:0000013,1.82e-09,3;UBERON:0010314,1.35e-08,92;UBERON:0011216,2.40e-08,194|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,3.11068836925433,2.70011876663381,1.89292465216244,0,0.220868540951614,5.63457676388789,7.47594673942244,11.9498442259303,0,0.383062014255563,1.38245879930619,0.527545150920775,0.0914876436024097,1.04182674111352,0.837548997004143,1.68828783009504,0.916789486660861,0.589257170947335,0.854230084794618,0.931997229126503,0.302904773332736,0.226714680320357,0,0,0,0,0,0,0.280888840263504,0,0,0,1.69012103732017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0.599162557619291,1.37250180845588,6.03140890141749,1.39059456153821,1.02286182932132,1.24672826735736,1.46017136760982,0,0.124406970610093,0,0,0,0,0,0.150704817835715,0.204109497453984,0.2562274405697,0.468508622798644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308713837137853,0,0,0.213288250535234,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0.476087281772027,0,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,3.47059041357882,1.56175497718655,6.03185513651837,5.01834475700359,5.79276552614225,6.22768367735431,1.61924280669958,2.04579100537918,2.37172666767914,4.81981974632711,0.141940085208269,0,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0.354680467284547,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0.170870880797853,1.44470807574256,1.48155621895769,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0.563047426353546,0,0,0,0.564751842617067,1.38097570952153,0.572895513439397,2.06223818812425,0,0,0.675022500231806,0.900642406448441,1.35942722695261,0,0,0.399024873401031,0.170733605754134,0.243106717068294,0,0.551530525350042,0.222246727801615,0,0,0,0,0.188626341386076,0.280924522409647,0.512201219238954,0.287177344778066,0,0.231768651889711,0.38581844092741,0.412085900803307,0.294397840268795,0,0.532427418478012,0.476872379894642,0.290692833264657,0.282328141245992,0.25384382367503,0.182927972872773,0.526139422875686,0.271608227691724,0,0,0.197008964751127,0,0.77468420592983,0.578719832943424,0.249810577937946,0,0.214871054048298,0,0,0|short_description=p2@Syt6}} | ||
|EntrezGene=54524 | |||
|HGNC= | |||
|MCL_coexpression_id=845 | |||
|UniProt=Q9R0N8,Q05BE2,D6RHQ5,Q6P1H9 | |||
|association_with_transcript=0bp_to_ENSMUST00000090697,ENSMUST00000098785,ENSMUST00000132325,NM_018800,uc008qsy.1,uc008qsz.1,uc008qta.1_5end | |||
|description=CAGE_peak_2_at_Syt6_5end | |||
|id=chr3:103379198..103379209,+ | |||
|ontology_enrichment_celltype=CL:0000540!3.49e-22!33;CL:0000047!3.49e-22!33;CL:0000031!3.49e-22!33;CL:0000404!3.49e-22!33;CL:0000221!6.43e-20!44;CL:0000133!6.43e-20!44;CL:0002319!5.11e-19!43;CL:0000393!5.76e-17!39;CL:0000211!5.76e-17!39;CL:0000055!1.32e-14!50;CL:0000117!3.64e-13!23;CL:0000337!3.64e-13!23;CL:0000107!2.55e-10!9;CL:0002321!4.83e-08!70;CL:0000220!4.83e-08!70;CL:0002609!1.45e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.84e-26,9;CL:0000540,2.98e-26,33;CL:0000047,2.98e-26,33;CL:0000031,2.98e-26,33;CL:0000404,2.98e-26,33;CL:0000393,1.32e-21,39;CL:0000211,1.32e-21,39;CL:0000221,4.92e-21,44;CL:0000133,4.92e-21,44;CL:0002319,3.14e-19,43;CL:0002609,1.26e-18,6;CL:0002321,1.10e-11,70;CL:0002608,1.43e-10,3;CL:0000117,4.14e-09,23;CL:0000337,4.14e-09,23;CL:0000723,4.92e-07,91;CL:0000048,4.92e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.11e-24!75;UBERON:0001016!2.11e-24!75;UBERON:0001017!2.75e-23!73;UBERON:0005743!2.75e-23!73;UBERON:0004121!4.37e-17!102;UBERON:0000924!4.37e-17!102;UBERON:0006601!4.37e-17!102;UBERON:0002020!5.89e-16!34;UBERON:0002791!4.18e-14!29;UBERON:0003528!4.18e-14!29;UBERON:0001893!4.18e-14!29;UBERON:0001049!5.89e-14!52;UBERON:0005068!5.89e-14!52;UBERON:0006241!5.89e-14!52;UBERON:0007135!5.89e-14!52;UBERON:0000955!2.80e-13!50;UBERON:0006238!2.80e-13!50;UBERON:0003080!3.69e-13!40;UBERON:0000033!7.88e-13!63;UBERON:0002346!1.02e-12!71;UBERON:0003075!1.02e-12!71;UBERON:0007284!1.02e-12!71;UBERON:0002780!1.66e-12!39;UBERON:0001890!1.66e-12!39;UBERON:0006240!1.66e-12!39;UBERON:0002616!1.75e-12!49;UBERON:0003056!3.18e-12!49;UBERON:0000010!4.44e-11!11;UBERON:0002410!2.55e-10!9;UBERON:0000956!1.40e-08!21;UBERON:0001869!1.40e-08!21;UBERON:0000203!1.40e-08!21;UBERON:0002420!3.34e-07!8;UBERON:0007245!3.34e-07!8;UBERON:0010009!3.34e-07!8;UBERON:0010011!3.34e-07!8;UBERON:0000454!3.34e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.84e-26,9;UBERON:0001017,9.90e-25,73;UBERON:0001016,6.24e-24,75;UBERON:0000010,2.34e-21,11;UBERON:0004121,1.94e-19,95;UBERON:0000924,1.94e-19,95;UBERON:0006601,1.94e-19,95;UBERON:0003528,4.38e-17,29;UBERON:0002791,4.38e-17,29;UBERON:0001893,4.38e-17,29;UBERON:0002780,8.33e-16,39;UBERON:0001890,8.33e-16,39;UBERON:0006240,8.33e-16,39;UBERON:0003080,2.52e-15,40;UBERON:0000955,1.90e-14,47;UBERON:0006238,1.90e-14,47;UBERON:0002020,3.87e-14,34;UBERON:0002616,6.96e-13,46;UBERON:0002346,1.32e-12,64;UBERON:0003075,1.32e-12,64;UBERON:0007284,1.32e-12,64;UBERON:0000956,1.70e-12,21;UBERON:0001869,1.70e-12,21;UBERON:0000203,1.70e-12,21;UBERON:0000073,5.71e-12,54;UBERON:0010371,6.20e-12,73;UBERON:0003056,6.89e-12,49;UBERON:0001049,5.23e-11,52;UBERON:0005068,5.23e-11,52;UBERON:0006241,5.23e-11,52;UBERON:0007135,5.23e-11,52;UBERON:0000011,2.34e-10,3;UBERON:0010313,7.58e-10,3;UBERON:0002342,7.58e-10,3;UBERON:0002005,7.58e-10,3;UBERON:0005428,7.58e-10,3;UBERON:0005062,7.58e-10,3;UBERON:0000013,1.82e-09,3;UBERON:0010314,1.35e-08,92;UBERON:0011216,2.40e-08,194 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,3.11068836925433,2.70011876663381,1.89292465216244,0,0.220868540951614,5.63457676388789,7.47594673942244,11.9498442259303,0,0.383062014255563,1.38245879930619,0.527545150920775,0.0914876436024097,1.04182674111352,0.837548997004143,1.68828783009504,0.916789486660861,0.589257170947335,0.854230084794618,0.931997229126503,0.302904773332736,0.226714680320357,0,0,0,0,0,0,0.280888840263504,0,0,0,1.69012103732017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0.599162557619291,1.37250180845588,6.03140890141749,1.39059456153821,1.02286182932132,1.24672826735736,1.46017136760982,0,0.124406970610093,0,0,0,0,0,0.150704817835715,0.204109497453984,0.2562274405697,0.468508622798644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308713837137853,0,0,0.213288250535234,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0.476087281772027,0,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,3.47059041357882,1.56175497718655,6.03185513651837,5.01834475700359,5.79276552614225,6.22768367735431,1.61924280669958,2.04579100537918,2.37172666767914,4.81981974632711,0.141940085208269,0,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0.354680467284547,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0.170870880797853,1.44470807574256,1.48155621895769,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0.563047426353546,0,0,0,0.564751842617067,1.38097570952153,0.572895513439397,2.06223818812425,0,0,0.675022500231806,0.900642406448441,1.35942722695261,0,0,0.399024873401031,0.170733605754134,0.243106717068294,0,0.551530525350042,0.222246727801615,0,0,0,0,0.188626341386076,0.280924522409647,0.512201219238954,0.287177344778066,0,0.231768651889711,0.38581844092741,0.412085900803307,0.294397840268795,0,0.532427418478012,0.476872379894642,0.290692833264657,0.282328141245992,0.25384382367503,0.182927972872773,0.526139422875686,0.271608227691724,0,0,0.197008964751127,0,0.77468420592983,0.578719832943424,0.249810577937946,0,0.214871054048298,0,0,0 | |||
|short_description=p2@Syt6 | |||
}} |
Revision as of 01:03, 14 September 2013
Short description: | p2@Syt6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Syt6_5end |
Coexpression cluster: | MCL_coexpression_mm9:845 |
Association with transcript: | 0bp_to_ENSMUST00000090697, ENSMUST00000098785, ENSMUST00000132325, NM_018800, uc008qsy.1, uc008qsz.1, uc008qta.1_5end |
EntrezGene: | Syt6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.84e-26 | 9 |
neuron | 2.98e-26 | 33 |
neuronal stem cell | 2.98e-26 | 33 |
neuroblast | 2.98e-26 | 33 |
electrically signaling cell | 2.98e-26 | 33 |
electrically responsive cell | 1.32e-21 | 39 |
electrically active cell | 1.32e-21 | 39 |
ectodermal cell | 4.92e-21 | 44 |
neurectodermal cell | 4.92e-21 | 44 |
neural cell | 3.14e-19 | 43 |
neuron of cerebral cortex | 1.26e-18 | 6 |
embryonic cell | 1.10e-11 | 70 |
hippocampal neuron | 1.43e-10 | 3 |
CNS neuron (sensu Vertebrata) | 4.14e-09 | 23 |
neuroblast (sensu Vertebrata) | 4.14e-09 | 23 |
somatic stem cell | 4.92e-07 | 91 |
multi fate stem cell | 4.92e-07 | 91 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.