FFCP PHASE1:Mm9::chr4:129251001..129251012,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=118|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:129251001..129251012,+|id=chr4:129251001..129251012,+|ontology_enrichment_celltype=CL:0000791!4.49e-28!9;CL:0000789!4.49e-28!9;CL:0002420!4.49e-28!9;CL:0002419!4.49e-28!9;CL:0000790!4.49e-28!9;CL:0000084!1.33e-27!11;CL:0000827!1.33e-27!11;CL:0000838!3.83e-25!12;CL:0000624!6.27e-25!8;CL:0000542!4.62e-23!13;CL:0000051!4.62e-23!13;CL:0002031!7.41e-19!25;CL:0000893!7.85e-19!6;CL:0002489!7.85e-19!6;CL:0000898!7.85e-19!6;CL:0000809!7.85e-19!6;CL:0000810!7.85e-19!6;CL:0000895!7.85e-19!6;CL:0000808!7.85e-19!6;CL:0000894!7.85e-19!6;CL:0000806!7.85e-19!6;CL:0000807!7.85e-19!6;CL:0000805!7.85e-19!6;CL:0002425!7.85e-19!6;CL:0002436!7.85e-19!6;CL:0002427!7.85e-19!6;CL:0002428!7.85e-19!6;CL:0002429!7.85e-19!6;CL:0002433!7.85e-19!6;CL:0002431!7.85e-19!6;CL:0002432!7.85e-19!6;CL:0000738!3.50e-17!17;CL:0002087!3.50e-17!17;CL:0000988!3.90e-14!32;CL:0002032!3.90e-14!32;CL:0000037!3.90e-14!32;CL:0000566!3.90e-14!32;CL:0000837!3.90e-14!32;CL:0002320!5.16e-09!46;CL:0000134!5.16e-09!46;CL:0000219!2.74e-07!54|ontology_enrichment_celltype_v019_2=CL:0000791,5.30e-53,9;CL:0000789,5.30e-53,9;CL:0002420,5.30e-53,9;CL:0002419,5.30e-53,9;CL:0000790,5.30e-53,9;CL:0000624,8.46e-44,8;CL:0000084,2.14e-43,11;CL:0000827,2.14e-43,11;CL:0000838,8.61e-40,12;CL:0000542,9.70e-37,13;CL:0000051,9.70e-37,13;CL:0000738,4.10e-28,17;CL:0002087,4.10e-28,17;CL:0000893,1.97e-26,6;CL:0002489,1.97e-26,6;CL:0000898,1.97e-26,6;CL:0000809,1.97e-26,6;CL:0000810,1.97e-26,6;CL:0000895,1.97e-26,6;CL:0000808,1.97e-26,6;CL:0000894,1.97e-26,6;CL:0000806,1.97e-26,6;CL:0000807,1.97e-26,6;CL:0000805,1.97e-26,6;CL:0002425,1.97e-26,6;CL:0002436,1.97e-26,6;CL:0002427,1.97e-26,6;CL:0002428,1.97e-26,6;CL:0002429,1.97e-26,6;CL:0002433,1.97e-26,6;CL:0002431,1.97e-26,6;CL:0002432,1.97e-26,6;CL:0002031,4.07e-19,25;CL:0000988,6.42e-15,32;CL:0002032,6.42e-15,32;CL:0000037,6.42e-15,32;CL:0000837,6.42e-15,32;CL:0000625,2.31e-11,1;CL:0000815,2.90e-11,1;CL:0000792,2.90e-11,1;CL:0002320,2.48e-10,46;CL:0000134,2.48e-10,46;CL:0000219,9.06e-09,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!4.65e-44!23;UBERON:0000974!4.65e-44!23;UBERON:0004807!4.65e-44!23;UBERON:0005058!4.65e-44!23;UBERON:0003351!4.65e-44!23;UBERON:0009113!4.65e-44!23;UBERON:0003295!4.65e-44!23;UBERON:0009722!4.65e-44!23;UBERON:0005562!4.65e-44!23;UBERON:0007690!4.65e-44!23;UBERON:0006562!4.65e-42!24;UBERON:0003408!4.65e-42!24;UBERON:0001557!4.65e-42!24;UBERON:0001042!4.65e-42!24;UBERON:0008814!4.65e-42!24;UBERON:0009145!4.65e-42!24;UBERON:0004177!7.85e-42!29;UBERON:0000072!6.03e-37!27;UBERON:0002390!3.86e-34!45;UBERON:0003061!3.86e-34!45;UBERON:0002193!1.03e-31!48;UBERON:0000063!1.36e-27!35;UBERON:0000065!5.72e-23!41;UBERON:0001004!2.51e-22!42;UBERON:0005057!6.31e-22!51;UBERON:0002405!3.00e-20!70;UBERON:0003929!4.21e-16!55;UBERON:0003081!4.02e-15!88;UBERON:0002368!2.00e-14!60;UBERON:0002530!5.23e-13!65;UBERON:0000490!9.46e-13!66;UBERON:0005911!5.06e-12!69;UBERON:0000949!2.35e-11!72;UBERON:0000064!2.44e-10!99;UBERON:0001041!3.27e-10!92;UBERON:0000077!1.84e-09!97;UBERON:0002384!5.16e-09!46;UBERON:0007811!7.36e-09!86;UBERON:0000153!9.04e-08!94;UBERON:0004921!3.74e-07!126;UBERON:0004185!3.74e-07!126;UBERON:0001007!5.69e-07!128;UBERON:0001555!5.69e-07!128;UBERON:0007026!5.69e-07!128;UBERON:0004119!8.54e-07!130;UBERON:0000925!8.54e-07!130;UBERON:0006595!8.54e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.78e-15,23;UBERON:0000974,3.78e-15,23;UBERON:0004807,3.78e-15,23;UBERON:0005058,3.78e-15,23;UBERON:0003351,3.78e-15,23;UBERON:0009113,3.78e-15,23;UBERON:0003295,3.78e-15,23;UBERON:0009722,3.78e-15,23;UBERON:0005562,3.78e-15,23;UBERON:0007690,3.78e-15,23;UBERON:0006562,1.61e-14,24;UBERON:0003408,1.61e-14,24;UBERON:0001557,1.61e-14,24;UBERON:0001042,1.61e-14,24;UBERON:0008814,1.61e-14,24;UBERON:0009145,1.61e-14,24;UBERON:0000072,6.58e-13,27;UBERON:0004177,5.11e-12,29;UBERON:0005057,5.11e-12,29;UBERON:0002384,2.48e-10,46;UBERON:0000077,5.95e-10,35;UBERON:0007811,1.13e-09,36;UBERON:0000065,1.74e-08,41;UBERON:0001004,2.79e-08,42;UBERON:0000153,4.37e-08,43;UBERON:0002390,1.01e-07,45;UBERON:0003061,1.01e-07,45;UBERON:0002193,3.13e-07,48;UBERON:0002405,3.13e-07,48|phase1_expression=0,0,0,0,0,0,0,4.00282302668886,3.23814060948833,5.14941957908386,0.171217968225505,0.398860794976682,1.36960583944965,3.4968160967599,0.333109761815663,0.404950534779652,0,0,0.274228867211478,0,0.17008658030214,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90144856804538,4.36921938885203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=118 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:129251001..129251012,+ | |||
|id=chr4:129251001..129251012,+ | |||
|ontology_enrichment_celltype=CL:0000791!4.49e-28!9;CL:0000789!4.49e-28!9;CL:0002420!4.49e-28!9;CL:0002419!4.49e-28!9;CL:0000790!4.49e-28!9;CL:0000084!1.33e-27!11;CL:0000827!1.33e-27!11;CL:0000838!3.83e-25!12;CL:0000624!6.27e-25!8;CL:0000542!4.62e-23!13;CL:0000051!4.62e-23!13;CL:0002031!7.41e-19!25;CL:0000893!7.85e-19!6;CL:0002489!7.85e-19!6;CL:0000898!7.85e-19!6;CL:0000809!7.85e-19!6;CL:0000810!7.85e-19!6;CL:0000895!7.85e-19!6;CL:0000808!7.85e-19!6;CL:0000894!7.85e-19!6;CL:0000806!7.85e-19!6;CL:0000807!7.85e-19!6;CL:0000805!7.85e-19!6;CL:0002425!7.85e-19!6;CL:0002436!7.85e-19!6;CL:0002427!7.85e-19!6;CL:0002428!7.85e-19!6;CL:0002429!7.85e-19!6;CL:0002433!7.85e-19!6;CL:0002431!7.85e-19!6;CL:0002432!7.85e-19!6;CL:0000738!3.50e-17!17;CL:0002087!3.50e-17!17;CL:0000988!3.90e-14!32;CL:0002032!3.90e-14!32;CL:0000037!3.90e-14!32;CL:0000566!3.90e-14!32;CL:0000837!3.90e-14!32;CL:0002320!5.16e-09!46;CL:0000134!5.16e-09!46;CL:0000219!2.74e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.30e-53,9;CL:0000789,5.30e-53,9;CL:0002420,5.30e-53,9;CL:0002419,5.30e-53,9;CL:0000790,5.30e-53,9;CL:0000624,8.46e-44,8;CL:0000084,2.14e-43,11;CL:0000827,2.14e-43,11;CL:0000838,8.61e-40,12;CL:0000542,9.70e-37,13;CL:0000051,9.70e-37,13;CL:0000738,4.10e-28,17;CL:0002087,4.10e-28,17;CL:0000893,1.97e-26,6;CL:0002489,1.97e-26,6;CL:0000898,1.97e-26,6;CL:0000809,1.97e-26,6;CL:0000810,1.97e-26,6;CL:0000895,1.97e-26,6;CL:0000808,1.97e-26,6;CL:0000894,1.97e-26,6;CL:0000806,1.97e-26,6;CL:0000807,1.97e-26,6;CL:0000805,1.97e-26,6;CL:0002425,1.97e-26,6;CL:0002436,1.97e-26,6;CL:0002427,1.97e-26,6;CL:0002428,1.97e-26,6;CL:0002429,1.97e-26,6;CL:0002433,1.97e-26,6;CL:0002431,1.97e-26,6;CL:0002432,1.97e-26,6;CL:0002031,4.07e-19,25;CL:0000988,6.42e-15,32;CL:0002032,6.42e-15,32;CL:0000037,6.42e-15,32;CL:0000837,6.42e-15,32;CL:0000625,2.31e-11,1;CL:0000815,2.90e-11,1;CL:0000792,2.90e-11,1;CL:0002320,2.48e-10,46;CL:0000134,2.48e-10,46;CL:0000219,9.06e-09,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!4.65e-44!23;UBERON:0000974!4.65e-44!23;UBERON:0004807!4.65e-44!23;UBERON:0005058!4.65e-44!23;UBERON:0003351!4.65e-44!23;UBERON:0009113!4.65e-44!23;UBERON:0003295!4.65e-44!23;UBERON:0009722!4.65e-44!23;UBERON:0005562!4.65e-44!23;UBERON:0007690!4.65e-44!23;UBERON:0006562!4.65e-42!24;UBERON:0003408!4.65e-42!24;UBERON:0001557!4.65e-42!24;UBERON:0001042!4.65e-42!24;UBERON:0008814!4.65e-42!24;UBERON:0009145!4.65e-42!24;UBERON:0004177!7.85e-42!29;UBERON:0000072!6.03e-37!27;UBERON:0002390!3.86e-34!45;UBERON:0003061!3.86e-34!45;UBERON:0002193!1.03e-31!48;UBERON:0000063!1.36e-27!35;UBERON:0000065!5.72e-23!41;UBERON:0001004!2.51e-22!42;UBERON:0005057!6.31e-22!51;UBERON:0002405!3.00e-20!70;UBERON:0003929!4.21e-16!55;UBERON:0003081!4.02e-15!88;UBERON:0002368!2.00e-14!60;UBERON:0002530!5.23e-13!65;UBERON:0000490!9.46e-13!66;UBERON:0005911!5.06e-12!69;UBERON:0000949!2.35e-11!72;UBERON:0000064!2.44e-10!99;UBERON:0001041!3.27e-10!92;UBERON:0000077!1.84e-09!97;UBERON:0002384!5.16e-09!46;UBERON:0007811!7.36e-09!86;UBERON:0000153!9.04e-08!94;UBERON:0004921!3.74e-07!126;UBERON:0004185!3.74e-07!126;UBERON:0001007!5.69e-07!128;UBERON:0001555!5.69e-07!128;UBERON:0007026!5.69e-07!128;UBERON:0004119!8.54e-07!130;UBERON:0000925!8.54e-07!130;UBERON:0006595!8.54e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.78e-15,23;UBERON:0000974,3.78e-15,23;UBERON:0004807,3.78e-15,23;UBERON:0005058,3.78e-15,23;UBERON:0003351,3.78e-15,23;UBERON:0009113,3.78e-15,23;UBERON:0003295,3.78e-15,23;UBERON:0009722,3.78e-15,23;UBERON:0005562,3.78e-15,23;UBERON:0007690,3.78e-15,23;UBERON:0006562,1.61e-14,24;UBERON:0003408,1.61e-14,24;UBERON:0001557,1.61e-14,24;UBERON:0001042,1.61e-14,24;UBERON:0008814,1.61e-14,24;UBERON:0009145,1.61e-14,24;UBERON:0000072,6.58e-13,27;UBERON:0004177,5.11e-12,29;UBERON:0005057,5.11e-12,29;UBERON:0002384,2.48e-10,46;UBERON:0000077,5.95e-10,35;UBERON:0007811,1.13e-09,36;UBERON:0000065,1.74e-08,41;UBERON:0001004,2.79e-08,42;UBERON:0000153,4.37e-08,43;UBERON:0002390,1.01e-07,45;UBERON:0003061,1.01e-07,45;UBERON:0002193,3.13e-07,48;UBERON:0002405,3.13e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,4.00282302668886,3.23814060948833,5.14941957908386,0.171217968225505,0.398860794976682,1.36960583944965,3.4968160967599,0.333109761815663,0.404950534779652,0,0,0.274228867211478,0,0.17008658030214,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90144856804538,4.36921938885203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21207784439725,0,0.102710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0.961563596159751,0.295379054349154,0.908698049533329,0.228620419965,0.504130925684203,0.682205165178267,1.05833025804362,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:129251001..129251012,+ | |||
}} |
Revision as of 03:52, 14 September 2013
Short description: | p@chr4:129251001..129251012, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:129251001..129251012, + |
Coexpression cluster: | MCL_coexpression_mm9:118 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 3.78e-15 | 23 |
neck | 3.78e-15 | 23 |
respiratory system epithelium | 3.78e-15 | 23 |
hemolymphoid system gland | 3.78e-15 | 23 |
pharyngeal epithelium | 3.78e-15 | 23 |
thymic region | 3.78e-15 | 23 |
pharyngeal gland | 3.78e-15 | 23 |
entire pharyngeal arch endoderm | 3.78e-15 | 23 |
thymus primordium | 3.78e-15 | 23 |
early pharyngeal endoderm | 3.78e-15 | 23 |
pharynx | 1.61e-14 | 24 |
gland of gut | 1.61e-14 | 24 |
upper respiratory tract | 1.61e-14 | 24 |
chordate pharynx | 1.61e-14 | 24 |
pharyngeal arch system | 1.61e-14 | 24 |
pharyngeal region of foregut | 1.61e-14 | 24 |
segment of respiratory tract | 6.58e-13 | 27 |
hemopoietic organ | 5.11e-12 | 29 |
immune organ | 5.11e-12 | 29 |
connective tissue | 2.48e-10 | 46 |
mixed endoderm/mesoderm-derived structure | 5.95e-10 | 35 |
craniocervical region | 1.13e-09 | 36 |
respiratory tract | 1.74e-08 | 41 |
respiratory system | 2.79e-08 | 42 |
anterior region of body | 4.37e-08 | 43 |
hematopoietic system | 1.01e-07 | 45 |
blood island | 1.01e-07 | 45 |
hemolymphoid system | 3.13e-07 | 48 |
immune system | 3.13e-07 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.