FFCP PHASE1:Hg19::chr8:80523994..80524003,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=11075|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10577|TSSclassifier=S|UniProt=E5RGX5|association_with_transcript=24bp_to_ENST00000518491_5end|description=CAGE_peak_7_at_STMN2_5end|id=chr8:80523994..80524003,+|ontology_enrichment_celltype=CL:0002617!3.60e-08!2;CL:0000047!3.97e-07!8|ontology_enrichment_celltype_v019=CL:0002617;2.74e-20;2!CL:0000136;1.94e-18;13!CL:0002615;1.28e-13;3!CL:0000540;1.99e-07;6!CL:0000404;1.99e-07;6|ontology_enrichment_celltype_v019_2=CL:0002617,2.26e-20,2;CL:0000136,5.44e-16,15;CL:0002615,1.32e-13,3;CL:0000047,1.62e-11,8;CL:0000540,2.09e-07,6;CL:0000031,2.09e-07,6;CL:0000404,2.09e-07,6|ontology_enrichment_development_v019=CL:0000031;1.99e-07;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!9.03e-58!82;UBERON:0001049!1.77e-55!57;UBERON:0005068!1.77e-55!57;UBERON:0006241!1.77e-55!57;UBERON:0007135!1.77e-55!57;UBERON:0005743!1.17e-54!86;UBERON:0002020!1.83e-51!34;UBERON:0003528!1.83e-51!34;UBERON:0000073!3.67e-51!94;UBERON:0001016!3.67e-51!94;UBERON:0001869!9.61e-51!32;UBERON:0002616!6.77e-50!59;UBERON:0000955!2.26e-49!69;UBERON:0006238!2.26e-49!69;UBERON:0001893!1.83e-47!34;UBERON:0002791!7.81e-45!33;UBERON:0002780!5.87e-42!41;UBERON:0001890!5.87e-42!41;UBERON:0006240!5.87e-42!41;UBERON:0002619!2.17e-41!22;UBERON:0003080!8.03e-41!42;UBERON:0003075!1.31e-38!86;UBERON:0007284!1.31e-38!86;UBERON:0002346!1.69e-36!90;UBERON:0000956!4.67e-36!25;UBERON:0000203!4.67e-36!25;UBERON:0001950!1.19e-35!20;UBERON:0003056!1.86e-28!61;UBERON:0000033!2.80e-27!123;UBERON:0000153!1.38e-25!129;UBERON:0007811!1.38e-25!129;UBERON:0004121!1.65e-25!169;UBERON:0000924!1.11e-24!173;UBERON:0006601!1.11e-24!173;UBERON:0007023!2.49e-23!115;UBERON:0002308!1.03e-16!9;UBERON:0000125!1.03e-16!9;UBERON:0004733!2.83e-15!12;UBERON:0002028!2.83e-15!12;UBERON:0007277!2.83e-15!12;UBERON:0003076!3.15e-15!15;UBERON:0003057!3.15e-15!15;UBERON:0000064!2.88e-14!219;UBERON:0004732!5.36e-14!13;UBERON:0000369!1.96e-13!4;UBERON:0002435!1.96e-13!4;UBERON:0000204!1.96e-13!4;UBERON:0010082!1.96e-13!4;UBERON:0000200!3.00e-13!6;UBERON:0002420!1.50e-12!9;UBERON:0007245!1.50e-12!9;UBERON:0010009!1.50e-12!9;UBERON:0010011!1.50e-12!9;UBERON:0000454!1.50e-12!9;UBERON:0002680!1.14e-11!9;UBERON:0001895!1.14e-11!9;UBERON:0010092!1.14e-11!9;UBERON:0009663!1.14e-11!7;UBERON:0000025!2.62e-11!194;UBERON:0000475!4.07e-11!365;UBERON:0005383!1.04e-10!3;UBERON:0005382!1.04e-10!3;UBERON:0001872!1.31e-10!5;UBERON:0002021!1.34e-10!5;UBERON:0000349!1.45e-10!5;UBERON:0000988!3.89e-10!3;UBERON:0001871!6.91e-10!7;UBERON:0002298!7.90e-10!8;UBERON:0003688!4.72e-09!6;UBERON:0002358!4.72e-09!6;UBERON:0003684!4.72e-09!6;UBERON:0001178!4.72e-09!6;UBERON:0001870!5.98e-08!2;UBERON:0001954!9.55e-08!2;UBERON:0003022!9.55e-08!2;UBERON:0002421!9.55e-08!2;UBERON:0002600!9.55e-08!2;UBERON:0001873!1.09e-07!2;UBERON:0010122!1.09e-07!2;UBERON:0004111!1.55e-07!241;UBERON:0002148!5.09e-07!2;UBERON:0009662!5.09e-07!2|ontology_enrichment_uberon_v019=UBERON:0002791;1.22e-26;32!UBERON:0001869;1.43e-25;32!UBERON:0002619;2.33e-25;22!UBERON:0003528;8.01e-25;34!UBERON:0002020;8.01e-25;34!UBERON:0000956;2.48e-22;25!UBERON:0000203;2.48e-22;25!UBERON:0001893;1.01e-21;34!UBERON:0001950;2.74e-21;20!UBERON:0002780;6.30e-18;41!UBERON:0001890;6.30e-18;41!UBERON:0001870;2.19e-13;3!UBERON:0000073;1.16e-12;53!UBERON:0002616;1.16e-12;53!UBERON:0001016;2.46e-09;83!UBERON:0002021;1.57e-08;5!UBERON:0001872;2.16e-08;5!UBERON:0001017;3.13e-08;75!UBERON:0000955;3.14e-08;68!UBERON:0003688;3.01e-07;6!UBERON:0002298;3.01e-07;6!UBERON:0002358;3.01e-07;6!UBERON:0003684;3.01e-07;6!UBERON:0001178;3.01e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0002791,3.86e-27,32;UBERON:0001869,3.86e-27,32;UBERON:0003528,1.64e-25,34;UBERON:0002020,1.64e-25,34;UBERON:0001893,1.64e-25,34;UBERON:0002619,1.98e-25,22;UBERON:0001017,2.50e-23,81;UBERON:0000073,2.79e-23,53;UBERON:0002616,2.79e-23,53;UBERON:0000956,2.15e-22,25;UBERON:0000203,2.15e-22,25;UBERON:0001049,5.84e-22,56;UBERON:0005068,5.84e-22,56;UBERON:0006241,5.84e-22,56;UBERON:0007135,5.84e-22,56;UBERON:0001950,2.39e-21,20;UBERON:0002780,4.98e-21,41;UBERON:0001890,4.98e-21,41;UBERON:0003080,4.98e-21,41;UBERON:0006240,4.98e-21,41;UBERON:0001016,8.10e-21,89;UBERON:0000955,1.53e-17,68;UBERON:0006238,1.53e-17,68;UBERON:0003075,1.68e-14,82;UBERON:0007284,1.68e-14,82;UBERON:0003056,8.70e-14,61;UBERON:0002346,9.49e-14,86;UBERON:0001870,1.70e-13,3;UBERON:0010371,4.55e-11,104;UBERON:0004121,7.22e-10,171;UBERON:0000924,7.22e-10,171;UBERON:0006601,7.22e-10,171;UBERON:0002021,1.48e-08,5;UBERON:0001872,2.24e-08,5;UBERON:0010314,2.45e-08,132;UBERON:0003688,3.05e-07,6;UBERON:0002358,3.05e-07,6;UBERON:0003684,3.05e-07,6;UBERON:0001178,3.05e-07,6;UBERON:0002298,3.15e-07,6;UBERON:0011216,5.53e-07,223|phase1_expression=2.72517568905835,2.5692062866918,1.69145284915165,2.00146596706261,0,0,5.06599756336621,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=11075 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10577 | |||
|TSSclassifier=S | |||
|UniProt=E5RGX5 | |||
|association_with_transcript=24bp_to_ENST00000518491_5end | |||
|description=CAGE_peak_7_at_STMN2_5end | |||
|id=chr8:80523994..80524003,+ | |||
|ontology_enrichment_celltype=CL:0002617!3.60e-08!2;CL:0000047!3.97e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002617;2.74e-20;2!CL:0000136;1.94e-18;13!CL:0002615;1.28e-13;3!CL:0000540;1.99e-07;6!CL:0000404;1.99e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002617,2.26e-20,2;CL:0000136,5.44e-16,15;CL:0002615,1.32e-13,3;CL:0000047,1.62e-11,8;CL:0000540,2.09e-07,6;CL:0000031,2.09e-07,6;CL:0000404,2.09e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000031;1.99e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p7@STMN2 | |||
}} |
Revision as of 06:06, 14 September 2013
Short description: | p7@STMN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_STMN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 24bp_to_ENST00000518491_5end |
EntrezGene: | STMN2 |
HGNC: | 10577 |
UniProt: | E5RGX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of breast | 2.26e-20 | 2 |
fat cell | 5.44e-16 | 15 |
adipocyte of omentum tissue | 1.32e-13 | 3 |
neuronal stem cell | 1.62e-11 | 8 |
neuron | 2.09e-07 | 6 |
neuroblast | 2.09e-07 | 6 |
electrically signaling cell | 2.09e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.