FFCP PHASE1:Mm9::chr5:150438739..150438765,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=15505|HGNC=|MCL_coexpression_id=2|UniProt=Q61699|association_with_transcript=0bp_to_ENSMUST00000076410_5end|description=CAGE_peak_3_at_Hsph1_5end|id=chr5:150438739..150438765,-|ontology_enrichment_celltype=CL:0000393!6.58e-11!39;CL:0000211!6.58e-11!39;CL:0000540!3.02e-09!33;CL:0000047!3.02e-09!33;CL:0000031!3.02e-09!33;CL:0000404!3.02e-09!33;CL:0000117!6.07e-09!23;CL:0000337!6.07e-09!23;CL:0000055!6.57e-08!50|ontology_enrichment_celltype_v019_2=CL:0000393,2.70e-11,39;CL:0000211,2.70e-11,39;CL:0000540,1.67e-09,33;CL:0000047,1.67e-09,33;CL:0000031,1.67e-09,33;CL:0000404,1.67e-09,33;CL:0000117,2.00e-09,23;CL:0000337,2.00e-09,23;CL:0002321,3.95e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.98e-21!73;UBERON:0005743!3.98e-21!73;UBERON:0001049!2.81e-20!52;UBERON:0005068!2.81e-20!52;UBERON:0006241!2.81e-20!52;UBERON:0007135!2.81e-20!52;UBERON:0002346!3.26e-20!71;UBERON:0003075!3.26e-20!71;UBERON:0007284!3.26e-20!71;UBERON:0000073!5.22e-20!75;UBERON:0001016!5.22e-20!75;UBERON:0000955!1.20e-19!50;UBERON:0006238!1.20e-19!50;UBERON:0002616!4.82e-19!49;UBERON:0000033!1.10e-18!63;UBERON:0004121!1.08e-17!102;UBERON:0000924!1.08e-17!102;UBERON:0006601!1.08e-17!102;UBERON:0002020!3.10e-17!34;UBERON:0003080!9.79e-17!40;UBERON:0003056!1.15e-16!49;UBERON:0002780!3.89e-16!39;UBERON:0001890!3.89e-16!39;UBERON:0006240!3.89e-16!39;UBERON:0002791!5.45e-15!29;UBERON:0003528!5.45e-15!29;UBERON:0001893!5.45e-15!29;UBERON:0007811!9.35e-13!86;UBERON:0000153!1.14e-12!94;UBERON:0000956!4.66e-11!21;UBERON:0001869!4.66e-11!21;UBERON:0000203!4.66e-11!21;UBERON:0002619!1.60e-09!17;UBERON:0002021!3.68e-08!10;UBERON:0000411!3.68e-08!10;UBERON:0001950!3.68e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.09e-23,54;UBERON:0001017,1.51e-22,73;UBERON:0002346,2.93e-22,64;UBERON:0003075,2.93e-22,64;UBERON:0007284,2.93e-22,64;UBERON:0001049,7.88e-22,52;UBERON:0005068,7.88e-22,52;UBERON:0006241,7.88e-22,52;UBERON:0007135,7.88e-22,52;UBERON:0001016,5.02e-21,75;UBERON:0010371,5.93e-20,73;UBERON:0000955,3.37e-19,47;UBERON:0006238,3.37e-19,47;UBERON:0002616,1.48e-18,46;UBERON:0002020,1.51e-18,34;UBERON:0004121,2.83e-18,95;UBERON:0000924,2.83e-18,95;UBERON:0006601,2.83e-18,95;UBERON:0003080,1.35e-17,40;UBERON:0003056,3.44e-17,49;UBERON:0002780,5.98e-17,39;UBERON:0001890,5.98e-17,39;UBERON:0006240,5.98e-17,39;UBERON:0003528,4.10e-16,29;UBERON:0002791,4.10e-16,29;UBERON:0001893,4.10e-16,29;UBERON:0010314,2.88e-13,92;UBERON:0000956,7.47e-12,21;UBERON:0001869,7.47e-12,21;UBERON:0000203,7.47e-12,21;UBERON:0002619,3.45e-10,17;UBERON:0002021,1.03e-08,10;UBERON:0000411,1.03e-08,10;UBERON:0001950,1.03e-08,10;UBERON:0004111,3.91e-07,122|phase1_expression=2.08193501236232,1.04692622291808,0,1.20985684522732,1.00179145989269,1.51091344720701,0.934450562382103,0.903863264091034,3.94208422024667,5.85161315804984,3.76679530096111,2.15384829287408,0.684802919724823,1.74840804837995,0.666219523631325,0.404950534779652,0,0.315462165358238,0.274228867211478,0,5.95303031057488,0.0992909512008853,0.261199789138935,0.47997726838022,0,0.57423196411502,0.86152399231815,0.430942465371778,0.190023419456374,0,0.221730510655305,0.635030673459631,0,0,1.73310971850765,2.49351968037739,1.22501613757421,0,0,0,0.588231488031014,0,0,9.19046771221714,7.40051597902456,4.40512205188036,0,1.30815093828268,1.09843091367236,3.4997381833371,1.39986421625363,0,0.167782606057736,1.45072428402269,2.01656279485478,2.05807548828758,3.72493471920384,1.03134418455488,1.82084814773638,5.28990979272033,0.633831403506179,0.677689064138264,0.889294796111139,0,0,0,0.599200221036809,1.15265491596466,3.52544681848824,2.56511282830212,2.94454945891935,3.99911378165325,2.65042249141936,3.1847607795888,2.49198224647415,1.83843757322004,7.70811166995721,13.2794831608595,13.3637683932932,2.50583946687368,3.38504281328916,5.73004707612436,9.21303896704557,10.1297269805702,11.1542720877071,5.00868595305235,5.69486723196412,6.52398060388552,0.530083353332288,0.831287161174641,8.11620568364698,1.72084775396277,0,1.07940638327563,1.94932925234301,0,2.10666630197628,2.04516387093669,1.29893002301434,0.70667914902068,1.54927761754349,3.84979432242953,10.1922095882658,0,1.29894624606728,0.760079596425296,2.02209778005913,2.74041311325744,1.03575153458869,3.85949561568544,1.38788261412909,1.21786191324856,1.38369298353635,1.05505848386836,0.587943535678524,1.50799909595611,0.494389935468748,3.18118585223806,0.884610551949874,0.647067399789637,0.883366073841574,0.484875253135222,0,2.63502717310392,3.56059401582874,1.27728527604296,0.479260498023681,0.599902730993408,0.889491589511453,12.7322043494099,35.2275464170342,7.79056983099759,45.1943232499919,46.5402132341202,12.4672826735736,24.0117069340281,0.611036183101898,0.248813941220186,0.252722758433675,1.89397670297827,0.910843100738926,1.60931473103431,1.26043490863744,2.41127708537144,1.7009124787832,1.5373646434182,1.49922759295566,3.62184719034622,1.72454394346274,2.080166881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| ||
|EntrezGene=15505 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=Q61699 | |||
|association_with_transcript=0bp_to_ENSMUST00000076410_5end | |||
|description=CAGE_peak_3_at_Hsph1_5end | |||
|id=chr5:150438739..150438765,- | |||
|ontology_enrichment_celltype=CL:0000393!6.58e-11!39;CL:0000211!6.58e-11!39;CL:0000540!3.02e-09!33;CL:0000047!3.02e-09!33;CL:0000031!3.02e-09!33;CL:0000404!3.02e-09!33;CL:0000117!6.07e-09!23;CL:0000337!6.07e-09!23;CL:0000055!6.57e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,2.70e-11,39;CL:0000211,2.70e-11,39;CL:0000540,1.67e-09,33;CL:0000047,1.67e-09,33;CL:0000031,1.67e-09,33;CL:0000404,1.67e-09,33;CL:0000117,2.00e-09,23;CL:0000337,2.00e-09,23;CL:0002321,3.95e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.98e-21!73;UBERON:0005743!3.98e-21!73;UBERON:0001049!2.81e-20!52;UBERON:0005068!2.81e-20!52;UBERON:0006241!2.81e-20!52;UBERON:0007135!2.81e-20!52;UBERON:0002346!3.26e-20!71;UBERON:0003075!3.26e-20!71;UBERON:0007284!3.26e-20!71;UBERON:0000073!5.22e-20!75;UBERON:0001016!5.22e-20!75;UBERON:0000955!1.20e-19!50;UBERON:0006238!1.20e-19!50;UBERON:0002616!4.82e-19!49;UBERON:0000033!1.10e-18!63;UBERON:0004121!1.08e-17!102;UBERON:0000924!1.08e-17!102;UBERON:0006601!1.08e-17!102;UBERON:0002020!3.10e-17!34;UBERON:0003080!9.79e-17!40;UBERON:0003056!1.15e-16!49;UBERON:0002780!3.89e-16!39;UBERON:0001890!3.89e-16!39;UBERON:0006240!3.89e-16!39;UBERON:0002791!5.45e-15!29;UBERON:0003528!5.45e-15!29;UBERON:0001893!5.45e-15!29;UBERON:0007811!9.35e-13!86;UBERON:0000153!1.14e-12!94;UBERON:0000956!4.66e-11!21;UBERON:0001869!4.66e-11!21;UBERON:0000203!4.66e-11!21;UBERON:0002619!1.60e-09!17;UBERON:0002021!3.68e-08!10;UBERON:0000411!3.68e-08!10;UBERON:0001950!3.68e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.09e-23,54;UBERON:0001017,1.51e-22,73;UBERON:0002346,2.93e-22,64;UBERON:0003075,2.93e-22,64;UBERON:0007284,2.93e-22,64;UBERON:0001049,7.88e-22,52;UBERON:0005068,7.88e-22,52;UBERON:0006241,7.88e-22,52;UBERON:0007135,7.88e-22,52;UBERON:0001016,5.02e-21,75;UBERON:0010371,5.93e-20,73;UBERON:0000955,3.37e-19,47;UBERON:0006238,3.37e-19,47;UBERON:0002616,1.48e-18,46;UBERON:0002020,1.51e-18,34;UBERON:0004121,2.83e-18,95;UBERON:0000924,2.83e-18,95;UBERON:0006601,2.83e-18,95;UBERON:0003080,1.35e-17,40;UBERON:0003056,3.44e-17,49;UBERON:0002780,5.98e-17,39;UBERON:0001890,5.98e-17,39;UBERON:0006240,5.98e-17,39;UBERON:0003528,4.10e-16,29;UBERON:0002791,4.10e-16,29;UBERON:0001893,4.10e-16,29;UBERON:0010314,2.88e-13,92;UBERON:0000956,7.47e-12,21;UBERON:0001869,7.47e-12,21;UBERON:0000203,7.47e-12,21;UBERON:0002619,3.45e-10,17;UBERON:0002021,1.03e-08,10;UBERON:0000411,1.03e-08,10;UBERON:0001950,1.03e-08,10;UBERON:0004111,3.91e-07,122 | |||
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| |||
|short_description=p3@Hsph1 | |||
}} |
Revision as of 07:08, 14 September 2013
Short description: | p3@Hsph1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Hsph1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 0bp_to_ENSMUST00000076410_5end |
EntrezGene: | Hsph1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 2.70e-11 | 39 |
electrically active cell | 2.70e-11 | 39 |
neuron | 1.67e-09 | 33 |
neuronal stem cell | 1.67e-09 | 33 |
neuroblast | 1.67e-09 | 33 |
electrically signaling cell | 1.67e-09 | 33 |
CNS neuron (sensu Vertebrata) | 2.00e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.00e-09 | 23 |
embryonic cell | 3.95e-07 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.