FFCP PHASE1:Hg19::chrX:132887732..132887744,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2719|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4451|TSSclassifier=S|UniProt=|association_with_transcript=-3bp_to_ENST00000406757_5end|coexpression_cluster_id=C786|description=CAGE_peak_9_at_GPC3_5end|id=chrX:132887732..132887744,-|ontology_enrichment_celltype=CL:0002322!9.20e-14!5;CL:0002617!7.33e-09!2|ontology_enrichment_celltype_v019=CL:0000182;2.19e-19;12!CL:0002563;1.75e-07;4|ontology_enrichment_celltype_v019_2=CL:0000182,1.87e-19,12;CL:0002563,1.92e-07,4;CL:0000223,2.67e-07,58|ontology_enrichment_development_v019=UBERON:0004161;1.96e-36;11!UBERON:0009497;6.20e-31;13!UBERON:0003104;7.07e-29;31!UBERON:0003099;6.72e-26;1!UBERON:0003852;6.72e-26;1!UBERON:0001041;1.01e-13;30!UBERON:0005062;1.75e-07;4!UBERON:0007284;1.75e-07;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:7;9.41e-07;39|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0005705;6.72e-26;1!UBERON:0008193;6.72e-26;1!UBERON:0010912;6.72e-26;1!UBERON:0002514;6.72e-26;1!UBERON:0003457;6.72e-26;1!UBERON:0008907;6.72e-26;1!UBERON:0008001;6.72e-26;1!UBERON:0007213;6.72e-26;1!UBERON:0009891;6.72e-26;1!UBERON:0007914;6.72e-26;1!UBERON:0007375;6.72e-26;1!UBERON:0003323;6.72e-26;1!UBERON:0010258;6.72e-26;1!UBERON:0005253;6.72e-26;1!UBERON:0007842;6.72e-26;1!UBERON:0002397;6.72e-26;1!UBERON:0003113;6.72e-26;1!UBERON:0003277;6.72e-26;1!UBERON:0001709;6.72e-26;1!UBERON:0002244;6.72e-26;1!UBERON:0005620;6.72e-26;1!UBERON:0010364;6.72e-26;1!UBERON:0004288;6.72e-26;1!UBERON:0002107;2.32e-21;19!UBERON:0006925;2.32e-21;19!UBERON:0002423;2.29e-16;25!UBERON:0004089;1.14e-13;2!UBERON:0002368;4.77e-12;33!UBERON:0002365;4.77e-12;31!UBERON:0002330;4.77e-12;31!UBERON:0002114;1.47e-09;2!UBERON:0000949;4.40e-08;43!UBERON:0001242;1.75e-07;4!UBERON:0001262;1.75e-07;4!UBERON:0004786;1.75e-07;4!UBERON:0004808;1.75e-07;4!UBERON:0001708;1.75e-07;4!UBERON:0001277;1.75e-07;4!UBERON:0008895;1.75e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0005705,4.61e-26,1;UBERON:0008193,4.61e-26,1;UBERON:0010912,4.61e-26,1;UBERON:0002514,4.61e-26,1;UBERON:0003457,4.61e-26,1;UBERON:0008907,4.61e-26,1;UBERON:0008001,4.61e-26,1;UBERON:0007213,4.61e-26,1;UBERON:0009891,4.61e-26,1;UBERON:0007914,4.61e-26,1;UBERON:0009292,4.61e-26,1;UBERON:0003099,4.61e-26,1;UBERON:0007375,4.61e-26,1;UBERON:0003323,4.61e-26,1;UBERON:0010258,4.61e-26,1;UBERON:0007842,4.61e-26,1;UBERON:0009494,4.61e-26,1;UBERON:0010042,4.61e-26,1;UBERON:0010045,4.61e-26,1;UBERON:0010259,4.61e-26,1;UBERON:0010359,4.61e-26,1;UBERON:0009526,4.61e-26,1;UBERON:0002397,4.61e-26,1;UBERON:0003113,4.61e-26,1;UBERON:0003277,4.61e-26,1;UBERON:0001709,4.61e-26,1;UBERON:0004066,4.61e-26,1;UBERON:0002244,4.61e-26,1;UBERON:0005620,4.61e-26,1;UBERON:0004362,4.61e-26,1;UBERON:0010364,4.61e-26,1;UBERON:0010046,4.61e-26,1;UBERON:0005868,4.61e-26,1;UBERON:0007238,4.61e-26,1;UBERON:0004288,4.61e-26,1;UBERON:0004068,4.61e-26,1;UBERON:0010334,4.61e-26,1;UBERON:0003852,4.61e-26,1;UBERON:0010253,4.61e-26,1;UBERON:0002107,1.98e-21,19;UBERON:0006925,1.98e-21,19;UBERON:0008836,1.98e-21,19;UBERON:0008835,1.39e-18,22;UBERON:0003894,1.39e-18,22;UBERON:0009854,8.44e-18,23;UBERON:0007499,2.03e-16,25;UBERON:0009497,2.03e-16,25;UBERON:0000015,2.03e-16,25;UBERON:0002423,2.03e-16,25;UBERON:0006235,2.03e-16,25;UBERON:0004161,2.03e-16,25;UBERON:0009856,8.31e-16,26;UBERON:0005253,9.40e-14,2;UBERON:0004089,9.40e-14,2;UBERON:0002365,2.45e-13,31;UBERON:0002330,2.45e-13,31;UBERON:0002368,7.26e-12,35;UBERON:0003929,9.00e-12,54;UBERON:0002114,1.81e-09,2;UBERON:0000949,2.54e-09,45;UBERON:0001007,2.52e-08,145;UBERON:0001555,2.52e-08,145;UBERON:0007026,2.52e-08,145;UBERON:0005172,7.87e-08,54;UBERON:0005173,7.87e-08,54;UBERON:0005911,8.06e-08,82;UBERON:0004921,1.38e-07,118;UBERON:0004119,1.54e-07,160;UBERON:0000925,1.54e-07,160;UBERON:0006595,1.54e-07,160;UBERON:0001708,1.59e-07,4;UBERON:0008895,1.59e-07,4;UBERON:0001242,1.92e-07,4;UBERON:0001262,1.92e-07,4;UBERON:0004786,1.92e-07,4;UBERON:0004808,1.92e-07,4;UBERON:0001277,1.92e-07,4;UBERON:0002530,3.39e-07,59;UBERON:0002417,4.41e-07,60;UBERON:0000916,4.41e-07,60|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0.265059536642971,0.580969714347592,0.518305275076852,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10689594688802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.09997299118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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2719 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4451 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-3bp_to_ENST00000406757_5end | |||
|coexpression_cluster_id=C786 | |||
|description=CAGE_peak_9_at_GPC3_5end | |||
|id=chrX:132887732..132887744,- | |||
|ontology_enrichment_celltype=CL:0002322!9.20e-14!5;CL:0002617!7.33e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.19e-19;12!CL:0002563;1.75e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.87e-19,12;CL:0002563,1.92e-07,4;CL:0000223,2.67e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.96e-36;11!UBERON:0009497;6.20e-31;13!UBERON:0003104;7.07e-29;31!UBERON:0003099;6.72e-26;1!UBERON:0003852;6.72e-26;1!UBERON:0001041;1.01e-13;30!UBERON:0005062;1.75e-07;4!UBERON:0007284;1.75e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:7;9.41e-07;39 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
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|short_description=p9@GPC3 | |||
}} |
Revision as of 10:47, 14 September 2013
Short description: | p9@GPC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_GPC3_5end |
Coexpression cluster: | C786_liver_hepatocellular_placenta_hepatoblastoma_normal_Intestinal_Wilms |
Association with transcript: | -3bp_to_ENST00000406757_5end |
EntrezGene: | GPC3 |
HGNC: | 4451 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.87e-19 | 12 |
intestinal epithelial cell | 1.92e-07 | 4 |
endodermal cell | 2.67e-07 | 58 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.