FFCP PHASE1:Mm9::chr6:85978747..85978762,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11519|HGNC=|MCL_coexpression_id=13|UniProt=Q9QYB8|association_with_transcript=25bp_to_uc009crc.1,uc009crd.1,uc009cre.1,uc009crf.1_5end|description=CAGE_peak_5_at_Add2_5end|id=chr6:85978747..85978762,+|ontology_enrichment_celltype=CL:0000540!1.25e-17!33;CL:0000047!1.25e-17!33;CL:0000031!1.25e-17!33;CL:0000404!1.25e-17!33;CL:0000117!4.91e-15!23;CL:0000337!4.91e-15!23;CL:0002319!6.14e-15!43;CL:0000221!9.19e-15!44;CL:0000133!9.19e-15!44;CL:0000393!5.40e-14!39;CL:0000211!5.40e-14!39;CL:0000055!1.09e-11!50|ontology_enrichment_celltype_v019_2=CL:0000540,9.18e-22,33;CL:0000047,9.18e-22,33;CL:0000031,9.18e-22,33;CL:0000404,9.18e-22,33;CL:0000117,7.40e-19,23;CL:0000337,7.40e-19,23;CL:0000393,2.72e-18,39;CL:0000211,2.72e-18,39;CL:0002319,1.33e-17,43;CL:0000221,6.92e-17,44;CL:0000133,6.92e-17,44;CL:0002321,6.01e-07,70;CL:0002609,8.43e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.61e-32!75;UBERON:0001016!1.61e-32!75;UBERON:0004121!1.20e-31!102;UBERON:0000924!1.20e-31!102;UBERON:0006601!1.20e-31!102;UBERON:0001017!1.31e-31!73;UBERON:0005743!1.31e-31!73;UBERON:0002346!5.79e-28!71;UBERON:0003075!5.79e-28!71;UBERON:0007284!5.79e-28!71;UBERON:0000033!9.83e-24!63;UBERON:0001049!2.48e-23!52;UBERON:0005068!2.48e-23!52;UBERON:0006241!2.48e-23!52;UBERON:0007135!2.48e-23!52;UBERON:0003056!3.61e-23!49;UBERON:0000955!1.21e-22!50;UBERON:0006238!1.21e-22!50;UBERON:0002616!5.36e-22!49;UBERON:0002020!3.77e-20!34;UBERON:0003080!7.59e-20!40;UBERON:0002780!2.80e-19!39;UBERON:0001890!2.80e-19!39;UBERON:0006240!2.80e-19!39;UBERON:0002791!1.14e-17!29;UBERON:0003528!1.14e-17!29;UBERON:0001893!1.14e-17!29;UBERON:0000956!1.14e-12!21;UBERON:0001869!1.14e-12!21;UBERON:0000203!1.14e-12!21;UBERON:0007811!1.51e-10!86;UBERON:0002619!5.23e-10!17;UBERON:0000153!1.70e-08!94;UBERON:0002021!3.19e-08!10;UBERON:0000411!3.19e-08!10;UBERON:0001950!3.19e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.16e-38,75;UBERON:0001017,1.67e-37,73;UBERON:0004121,2.12e-36,95;UBERON:0000924,2.12e-36,95;UBERON:0006601,2.12e-36,95;UBERON:0002346,7.07e-35,64;UBERON:0003075,7.07e-35,64;UBERON:0007284,7.07e-35,64;UBERON:0000073,1.88e-30,54;UBERON:0001049,1.03e-28,52;UBERON:0005068,1.03e-28,52;UBERON:0006241,1.03e-28,52;UBERON:0007135,1.03e-28,52;UBERON:0010371,1.36e-28,73;UBERON:0003056,7.82e-28,49;UBERON:0000955,2.32e-25,47;UBERON:0006238,2.32e-25,47;UBERON:0002020,2.98e-25,34;UBERON:0002616,1.49e-24,46;UBERON:0003080,1.49e-23,40;UBERON:0002780,7.81e-23,39;UBERON:0001890,7.81e-23,39;UBERON:0006240,7.81e-23,39;UBERON:0003528,4.61e-22,29;UBERON:0002791,4.61e-22,29;UBERON:0001893,4.61e-22,29;UBERON:0010314,1.22e-19,92;UBERON:0000956,1.21e-15,21;UBERON:0001869,1.21e-15,21;UBERON:0000203,1.21e-15,21;UBERON:0002619,3.11e-12,17;UBERON:0002021,4.10e-10,10;UBERON:0000411,4.10e-10,10;UBERON:0001950,4.10e-10,10;UBERON:0002420,1.45e-07,8;UBERON:0007245,1.45e-07,8;UBERON:0010009,1.45e-07,8;UBERON:0010011,1.45e-07,8;UBERON:0000454,1.45e-07,8|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06155844543851,0,0,0,0,0,0,0,0,0,0,1.27006134691926,2.46025915033828,0,0,0,0,0,0,0,0,0,0,1.38486499773135,1.62203089951223,0,0,0,0,0.194429899074283,0.419959264876088,1.43752564364972,0,0,0,0,0,0,17.3992156339254,13.7537654610729,15.8457850876545,2.71075625655306,0.889294796111139,0,0,0,0.299600110518405,1.15265491596466,16.6940275816649,20.520902626417,19.7705463670299,4.57041575046086,5.52171352379034,20.3334726696824,20.5109307979026,28.4957823849107,18.7196997698961,14.1732945274558,11.981309593987,22.9482140650537,19.6698433745181,18.7528813400434,10.0505879640497,12.380777420697,13.1406493088057,5.00868595305235,5.83723891276322,11.183966749518,2.57469057332826,3.40072020480535,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0.148442139064825,0.520455980298408,2.43572382649713,1.38369298353635,1.80867168663147,0.705532242814229,0.125666591329675,0.741584903203122,0.144599356919912,0,0,0,0,0,8.49064311333487,10.2628886338593,0.255457055208591,0,0,0,11.5338792341713,13.2675174817402,16.8376831831238,19.1206752211504,20.9686675010871,10.8049783170971,16.710850095979,0,0,0,2.10441855886474,1.56144531555244,3.44853156650209,4.68161537493908,4.06903008156431,4.42237244483631,2.3060469651273,3.84177070694888,3.10444044886819,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0,0.59710280045548,0,0,0,0.828503090142008,0.234526059981096,0,0,0.196764231747404,0.308534225774757,0,0.268273401399619,0,0.16455984991348,0,0.162137619091711,0,0,0,23.3421842906181,20.3751132510983,2.64335026387038,0,0.853153002140936,0.232236671860439,1.15980715189884,0.80673409849337,0.667134131534611,0.760902504450237,0.474529061544512,0.658795818896044,0,0.596869416123452,0,0,0,0.597423819763102,0.569003702859245,0.456994050438915,1.1270773567308,0.407302655690628,0.387904974335251,0.210407459670956,0.126473074248515,0,0,0,0,0,0,0,0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| ||
|EntrezGene=11519 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt=Q9QYB8 | |||
|association_with_transcript=25bp_to_uc009crc.1,uc009crd.1,uc009cre.1,uc009crf.1_5end | |||
|description=CAGE_peak_5_at_Add2_5end | |||
|id=chr6:85978747..85978762,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.25e-17!33;CL:0000047!1.25e-17!33;CL:0000031!1.25e-17!33;CL:0000404!1.25e-17!33;CL:0000117!4.91e-15!23;CL:0000337!4.91e-15!23;CL:0002319!6.14e-15!43;CL:0000221!9.19e-15!44;CL:0000133!9.19e-15!44;CL:0000393!5.40e-14!39;CL:0000211!5.40e-14!39;CL:0000055!1.09e-11!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,9.18e-22,33;CL:0000047,9.18e-22,33;CL:0000031,9.18e-22,33;CL:0000404,9.18e-22,33;CL:0000117,7.40e-19,23;CL:0000337,7.40e-19,23;CL:0000393,2.72e-18,39;CL:0000211,2.72e-18,39;CL:0002319,1.33e-17,43;CL:0000221,6.92e-17,44;CL:0000133,6.92e-17,44;CL:0002321,6.01e-07,70;CL:0002609,8.43e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.61e-32!75;UBERON:0001016!1.61e-32!75;UBERON:0004121!1.20e-31!102;UBERON:0000924!1.20e-31!102;UBERON:0006601!1.20e-31!102;UBERON:0001017!1.31e-31!73;UBERON:0005743!1.31e-31!73;UBERON:0002346!5.79e-28!71;UBERON:0003075!5.79e-28!71;UBERON:0007284!5.79e-28!71;UBERON:0000033!9.83e-24!63;UBERON:0001049!2.48e-23!52;UBERON:0005068!2.48e-23!52;UBERON:0006241!2.48e-23!52;UBERON:0007135!2.48e-23!52;UBERON:0003056!3.61e-23!49;UBERON:0000955!1.21e-22!50;UBERON:0006238!1.21e-22!50;UBERON:0002616!5.36e-22!49;UBERON:0002020!3.77e-20!34;UBERON:0003080!7.59e-20!40;UBERON:0002780!2.80e-19!39;UBERON:0001890!2.80e-19!39;UBERON:0006240!2.80e-19!39;UBERON:0002791!1.14e-17!29;UBERON:0003528!1.14e-17!29;UBERON:0001893!1.14e-17!29;UBERON:0000956!1.14e-12!21;UBERON:0001869!1.14e-12!21;UBERON:0000203!1.14e-12!21;UBERON:0007811!1.51e-10!86;UBERON:0002619!5.23e-10!17;UBERON:0000153!1.70e-08!94;UBERON:0002021!3.19e-08!10;UBERON:0000411!3.19e-08!10;UBERON:0001950!3.19e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.16e-38,75;UBERON:0001017,1.67e-37,73;UBERON:0004121,2.12e-36,95;UBERON:0000924,2.12e-36,95;UBERON:0006601,2.12e-36,95;UBERON:0002346,7.07e-35,64;UBERON:0003075,7.07e-35,64;UBERON:0007284,7.07e-35,64;UBERON:0000073,1.88e-30,54;UBERON:0001049,1.03e-28,52;UBERON:0005068,1.03e-28,52;UBERON:0006241,1.03e-28,52;UBERON:0007135,1.03e-28,52;UBERON:0010371,1.36e-28,73;UBERON:0003056,7.82e-28,49;UBERON:0000955,2.32e-25,47;UBERON:0006238,2.32e-25,47;UBERON:0002020,2.98e-25,34;UBERON:0002616,1.49e-24,46;UBERON:0003080,1.49e-23,40;UBERON:0002780,7.81e-23,39;UBERON:0001890,7.81e-23,39;UBERON:0006240,7.81e-23,39;UBERON:0003528,4.61e-22,29;UBERON:0002791,4.61e-22,29;UBERON:0001893,4.61e-22,29;UBERON:0010314,1.22e-19,92;UBERON:0000956,1.21e-15,21;UBERON:0001869,1.21e-15,21;UBERON:0000203,1.21e-15,21;UBERON:0002619,3.11e-12,17;UBERON:0002021,4.10e-10,10;UBERON:0000411,4.10e-10,10;UBERON:0001950,4.10e-10,10;UBERON:0002420,1.45e-07,8;UBERON:0007245,1.45e-07,8;UBERON:0010009,1.45e-07,8;UBERON:0010011,1.45e-07,8;UBERON:0000454,1.45e-07,8 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06155844543851,0,0,0,0,0,0,0,0,0,0,1.27006134691926,2.46025915033828,0,0,0,0,0,0,0,0,0,0,1.38486499773135,1.62203089951223,0,0,0,0,0.194429899074283,0.419959264876088,1.43752564364972,0,0,0,0,0,0,17.3992156339254,13.7537654610729,15.8457850876545,2.71075625655306,0.889294796111139,0,0,0,0.299600110518405,1.15265491596466,16.6940275816649,20.520902626417,19.7705463670299,4.57041575046086,5.52171352379034,20.3334726696824,20.5109307979026,28.4957823849107,18.7196997698961,14.1732945274558,11.981309593987,22.9482140650537,19.6698433745181,18.7528813400434,10.0505879640497,12.380777420697,13.1406493088057,5.00868595305235,5.83723891276322,11.183966749518,2.57469057332826,3.40072020480535,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0.148442139064825,0.520455980298408,2.43572382649713,1.38369298353635,1.80867168663147,0.705532242814229,0.125666591329675,0.741584903203122,0.144599356919912,0,0,0,0,0,8.49064311333487,10.2628886338593,0.255457055208591,0,0,0,11.5338792341713,13.2675174817402,16.8376831831238,19.1206752211504,20.9686675010871,10.8049783170971,16.710850095979,0,0,0,2.10441855886474,1.56144531555244,3.44853156650209,4.68161537493908,4.06903008156431,4.42237244483631,2.3060469651273,3.84177070694888,3.10444044886819,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0,0.59710280045548,0,0,0,0.828503090142008,0.234526059981096,0,0,0.196764231747404,0.308534225774757,0,0.268273401399619,0,0.16455984991348,0,0.162137619091711,0,0,0,23.3421842906181,20.3751132510983,2.64335026387038,0,0.853153002140936,0.232236671860439,1.15980715189884,0.80673409849337,0.667134131534611,0.760902504450237,0.474529061544512,0.658795818896044,0,0.596869416123452,0,0,0,0.597423819763102,0.569003702859245,0.456994050438915,1.1270773567308,0.407302655690628,0.387904974335251,0.210407459670956,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0.704070744865506,0.335012514883631,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,12.2018448390722,11.7211686592203,0,0,1.89304931649754,3.90438744296638,4.30846795465598,1.19484398976276,4.23317480756549,3.67999490025482,4.85772842009873,4.67609372658099,7.11518000303742,15.7447445046685,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0.604647113929502,0,0,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,0,4.76615448055303,2.16073312837572,2.06973894052407,0.643011105094777,0.177340233642274,1.78368817602071,1.64549020602121,1.2178597964584,0.704015124191131,1.90648863777438,0.220528398054962,0,0.484393280087717,0,0.238744688006273,1.31312719796049,0.291480836629851,12.0526446306831,0,0,0.185194527369712,0,0,0,0,0,0,0,0.790839983952838,0.813277868507395,0.86404272657441,0,0.218362563746178,0.404593039154462,0.743881101528023,1.04702376793612,0,0,0,0.299033092087958,0.496375471371293,0.388902376688095,0.129159823477731,0,0,0.2604087696879,0,0,0,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0.375364950902364,4.2124873581471,0.857473516316263,0,17.5073071211291,23.9369122983732,19.4784474569395,17.5290245990561,19.182310553578,27.1941803060292,20.925697507186,15.7612421128477,23.1102628581944,17.6038505995619,2.28332164685189,1.99512436700516,3.24393850932855,1.94485373654635,2.72497111416377,2.38996560985018,1.33348036680969,2.88449080134452,2.24643446714271,2.27427490587418,2.78827229879264,2.45214243801899,2.34103768674706,2.30490548657529,2.1825478203133,0.952587382566147,2.66533949673168,2.12200142510076,2.06042950401653,2.64958056241915,1.71434626192708,1.95223386775271,2.38436189947321,2.47088908274958,1.97629698872194,1.86152137361688,2.74391959309159,1.31534855718921,1.90125759384206,1.68342681497322,3.08451047122853,2.65962102414021,2.45538625901814,2.01417893541756,2.50778594275484,6.49507502638659,1.40358965067245,2.14871054048298,0.765153328275374,0.661774257358546,1.15933917810211 | |||
|short_description=p5@Add2 | |||
}} |
Revision as of 10:49, 14 September 2013
Short description: | p5@Add2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Add2_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 25bp_to_uc009crc.1, uc009crd.1, uc009cre.1, uc009crf.1_5end |
EntrezGene: | Add2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 9.18e-22 | 33 |
neuronal stem cell | 9.18e-22 | 33 |
neuroblast | 9.18e-22 | 33 |
electrically signaling cell | 9.18e-22 | 33 |
CNS neuron (sensu Vertebrata) | 7.40e-19 | 23 |
neuroblast (sensu Vertebrata) | 7.40e-19 | 23 |
electrically responsive cell | 2.72e-18 | 39 |
electrically active cell | 2.72e-18 | 39 |
neural cell | 1.33e-17 | 43 |
ectodermal cell | 6.92e-17 | 44 |
neurectodermal cell | 6.92e-17 | 44 |
embryonic cell | 6.01e-07 | 70 |
neuron of cerebral cortex | 8.43e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.