FFCP PHASE1:Mm9::chr7:133966801..133966837,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=68952|HGNC=|MCL_coexpression_id=2369|UniProt=Q7TNV1|association_with_transcript=0bp_to_ENSMUST00000079423,NM_029978,uc009jsy.2_5end|description=CAGE_peak_1_at_Fam57b_5end|id=chr7:133966801..133966837,+|ontology_enrichment_celltype=CL:0000117!4.16e-13!23;CL:0000337!4.16e-13!23;CL:0000540!2.96e-12!33;CL:0000047!2.96e-12!33;CL:0000031!2.96e-12!33;CL:0000404!2.96e-12!33;CL:0002319!5.69e-10!43;CL:0000221!6.36e-10!44;CL:0000133!6.36e-10!44;CL:0000393!2.37e-08!39;CL:0000211!2.37e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.08e-13,23;CL:0000337,1.08e-13,23;CL:0000540,8.53e-13,33;CL:0000047,8.53e-13,33;CL:0000031,8.53e-13,33;CL:0000404,8.53e-13,33;CL:0002319,4.96e-10,43;CL:0000221,5.52e-10,44;CL:0000133,5.52e-10,44;CL:0000393,1.31e-08,39;CL:0000211,1.31e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.41e-29!102;UBERON:0000924!2.41e-29!102;UBERON:0006601!2.41e-29!102;UBERON:0002346!2.15e-27!71;UBERON:0003075!2.15e-27!71;UBERON:0007284!2.15e-27!71;UBERON:0001017!3.15e-26!73;UBERON:0005743!3.15e-26!73;UBERON:0000073!7.14e-26!75;UBERON:0001016!7.14e-26!75;UBERON:0000033!1.39e-24!63;UBERON:0001049!6.26e-23!52;UBERON:0005068!6.26e-23!52;UBERON:0006241!6.26e-23!52;UBERON:0007135!6.26e-23!52;UBERON:0000955!1.58e-21!50;UBERON:0006238!1.58e-21!50;UBERON:0002616!8.08e-21!49;UBERON:0003056!7.13e-20!49;UBERON:0002020!6.66e-17!34;UBERON:0003080!9.94e-17!40;UBERON:0002780!4.13e-16!39;UBERON:0001890!4.13e-16!39;UBERON:0006240!4.13e-16!39;UBERON:0002791!5.19e-14!29;UBERON:0003528!5.19e-14!29;UBERON:0001893!5.19e-14!29;UBERON:0007811!3.01e-10!86;UBERON:0000956!1.13e-09!21;UBERON:0001869!1.13e-09!21;UBERON:0000203!1.13e-09!21;UBERON:0000468!2.02e-09!333;UBERON:0000153!3.24e-08!94;UBERON:0002619!7.27e-08!17;UBERON:0002021!4.37e-07!10;UBERON:0000411!4.37e-07!10;UBERON:0001950!4.37e-07!10;UBERON:0003076!7.15e-07!12;UBERON:0003057!7.15e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0004121,9.13e-28,95;UBERON:0000924,9.13e-28,95;UBERON:0006601,9.13e-28,95;UBERON:0002346,3.78e-27,64;UBERON:0003075,3.78e-27,64;UBERON:0007284,3.78e-27,64;UBERON:0001017,5.62e-27,73;UBERON:0001016,1.30e-26,75;UBERON:0010371,1.07e-24,73;UBERON:0000073,1.63e-24,54;UBERON:0001049,1.78e-23,52;UBERON:0005068,1.78e-23,52;UBERON:0006241,1.78e-23,52;UBERON:0007135,1.78e-23,52;UBERON:0003056,2.72e-20,49;UBERON:0000955,2.94e-20,47;UBERON:0006238,2.94e-20,47;UBERON:0010314,1.09e-19,92;UBERON:0002616,1.56e-19,46;UBERON:0002020,3.93e-17,34;UBERON:0003080,5.45e-17,40;UBERON:0002780,2.41e-16,39;UBERON:0001890,2.41e-16,39;UBERON:0006240,2.41e-16,39;UBERON:0003528,4.13e-14,29;UBERON:0002791,4.13e-14,29;UBERON:0001893,4.13e-14,29;UBERON:0000956,1.39e-09,21;UBERON:0001869,1.39e-09,21;UBERON:0000203,1.39e-09,21;UBERON:0002619,1.06e-07,17;UBERON:0002021,2.29e-07,10;UBERON:0000411,2.29e-07,10;UBERON:0001950,2.29e-07,10;UBERON:0003076,3.83e-07,12;UBERON:0003057,3.83e-07,12|phase1_expression=6.08565618998217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.1433983142047,0.198581902401771,0.522399578277871,0.159992422793407,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0.367093504323363,2.34717403304412,8.72100625521786,0.659058548203415,0.388859798148567,1.25987779462826,1.43752564364972,0,0,0,1.28629718017973,0,0,157.199890087907,198.371617227012,155.92252526252,0.677689064138264,0,0,1.97773272513395,0,5.09320187881288,8.06858441175265,82.1221729483143,90.1839668055694,81.3957600429848,159.107598312919,159.246218026113,119.91849243144,121.436211780105,119.498442259303,134.341374819254,139.051511174769,163.590957917899,183.4538262327,172.36272054694,184.403333177093,173.651825378859,66.9687505937699,82.9694485428079,181.491208651779,170.561273597325,153.593143360048,1.59025005999687,6.04572480854284,15.9425468785923,0,0,1.07940638327563,0,0,58.5653231949405,0,0,0,3.80277233397037,1.28326477414318,2.54805239706646,0,0.216491041011214,0,0.505524445014783,10.9616524530298,3.10725460376606,13.5082346548991,11.2765462397988,12.7875500891099,11.3001593655469,15.8258772580254,12.8171690777918,10.5559936716927,0.741584903203122,15.6167305473505,15.0383793831479,7.27950824763341,19.654895142975,22.3042616442202,1.86391761218122,286.632400274305,200.859391834103,1.78819938646014,0.11981512450592,0,0,175.105257464238,112.545148293382,213.738052943982,164.090158261509,199.458056717658,141.088082255941,126.548185192851,1.2220723662038,13.6847667671102,0.505445516867349,337.548736841904,3.90361328888111,11.4951052216736,21.0672691872259,27.1268672104287,40.2776074975861,66.491020827837,59.0320864726292,759.035689748272,0.646703978798527,0.567318240503458,0.527853372491847,0.219195732427575,0.556094498451196,0,1.02891068203972,0.59710280045548,0,0,0,0.207125772535502,0.469052119962192,0.720248245844059,0.710234206755631,0.196764231747404,0.617068451549513,0.232533944750408,0.536546802799238,0.700592054203017,1.6455984991348,5.41752631461014,8.26901857367728,10.0877991323479,7.68425403518677,8.18659154438268,154.352822246069,202.72208638719,0.660837565967596,3.43785736662608,1.70630600428187,2.55460339046482,4.63922860759536,3.22693639397348,4.00280478920767,3.23383564391351,4.2707615539006,3.29397909448022,3.77002813200404,3.97912944082302,3.70431765526328,1.79763881730844,4.32276099749388,1.99141273254367,1.32767530667157,2.28497025219458,0,0.814605311381257,0.581857461502877,1.47285221769669,1.96033265085198,2.95220295959204,4.55296310739987,3.08492909804501,0.592905254174298,0.333690211432188,0.196558995113203,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0,0.274561413188081,2.87536413054709,0,0.624075346229121,0.505157755894224,2.33216637578486,0,9.05290631816363,1.32643988239339,1.62964976442026,0.678980343100753,0.938760993154008,0.502518772325447,0.476087281772027,1.36593553500459,1.89162172927429,2.21464689648775,0.797273843287435,5.73521601505083,6.21665934717224,7.37710198765709,0,0.54390568381871,4.91764273019036,1.93155722413313,246.124054451285,187.890333607302,0,82.3055222686256,5.36363973007636,4.29482618726302,21.1114929778143,1.43381278771531,4.90157082981267,3.96307143104365,5.66734982344852,16.9508397588561,16.9973744517005,224.603600178843,1.41940085208269,2.49291845134157,1.46598263418218,0.989820737835213,2.65490276679926,1.69946445308487,2.11626489875326,1.88605079755898,3.83892460745005,2.45948118355142,2.58428293168221,2.54473610634254,3.92147116223193,5.05658812697306,5.27093042874994,5.15677716240934,40.5123130847008,9.90336017172206,9.18446654857557,8.78781843629528,24.2956120089915,22.2961022002588,17.7712942250291,18.5723618959906,0.938686832254841,7.20229040936989,1.98475558249466,43.2001982706678,0.968786560175433,2.0506394475573,0.596861720015682,1.96969079694074,2.91480836629851,268.495837311218,0,0.82554747185289,0.185194527369712,0,0.136694227721025,0,0,0,0,12.4107180341965,2.21435195506795,4.26970880966382,3.67218158794124,1.67270636811575,1.74690050996942,2.15782954215713,2.47960367176008,1.83229159388821,2.59229946583586,1.24267862617385,0.56369293868419,0,0,0.972255941720238,0.904118764344118,1.68956125490778,3.0512882047896,2.604087696879,1.57289016638566,1.93267296660805,6.91272015018877,0,0.810900861160657,0.410843828659309,0,0.358053391334963,0.198681354781265,0,0.295379054349154,0.302899349844443,0.15241361331,0.504130925684203,0.292373642219257,0.192423683280659,0.116876902181569,31.9689840897448,2.88581739386284,3.3194126945506,1.67884616364078,1.54551675225752,2.62755465631655,0.73260649706906,1.07184189539533,0,292.54145447564,286.322297107464,285.874861206259,174.430980078843,141.126999072752,154.100355067499,149.854995051461,145.003427438199,153.615276645645,166.718820384086,12.350694362517,36.7102883528949,37.2199260544012,27.9572724628538,34.7957849962451,33.8272055548026,26.6696073361938,34.2018195016564,39.4730627797933,34.1141235881127,40.5566879824384,36.5935102288988,30.0589238978323,31.4363498307908,33.1977010563445,35.7220268462305,26.4216263154271,23.7278341170357,30.0822707586414,29.2925851067451,33.2583174813853,27.863701567016,29.3276513635205,26.0170085771868,26.7270640379539,25.7228407990697,28.170907822407,23.6762740294059,27.2966268830182,35.3519631144375,23.133828534214,26.2021923118999,25.3723246765207,28.6633156194037,21.798447040869,81.6880589857083,25.2646137121041,27.7183659722305,17.0246615541271,10.1472052794977,14.1439379728457|short_description=p1@Fam57b}} | ||
|EntrezGene=68952 | |||
|HGNC= | |||
|MCL_coexpression_id=2369 | |||
|UniProt=Q7TNV1 | |||
|association_with_transcript=0bp_to_ENSMUST00000079423,NM_029978,uc009jsy.2_5end | |||
|description=CAGE_peak_1_at_Fam57b_5end | |||
|id=chr7:133966801..133966837,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.16e-13!23;CL:0000337!4.16e-13!23;CL:0000540!2.96e-12!33;CL:0000047!2.96e-12!33;CL:0000031!2.96e-12!33;CL:0000404!2.96e-12!33;CL:0002319!5.69e-10!43;CL:0000221!6.36e-10!44;CL:0000133!6.36e-10!44;CL:0000393!2.37e-08!39;CL:0000211!2.37e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.08e-13,23;CL:0000337,1.08e-13,23;CL:0000540,8.53e-13,33;CL:0000047,8.53e-13,33;CL:0000031,8.53e-13,33;CL:0000404,8.53e-13,33;CL:0002319,4.96e-10,43;CL:0000221,5.52e-10,44;CL:0000133,5.52e-10,44;CL:0000393,1.31e-08,39;CL:0000211,1.31e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.41e-29!102;UBERON:0000924!2.41e-29!102;UBERON:0006601!2.41e-29!102;UBERON:0002346!2.15e-27!71;UBERON:0003075!2.15e-27!71;UBERON:0007284!2.15e-27!71;UBERON:0001017!3.15e-26!73;UBERON:0005743!3.15e-26!73;UBERON:0000073!7.14e-26!75;UBERON:0001016!7.14e-26!75;UBERON:0000033!1.39e-24!63;UBERON:0001049!6.26e-23!52;UBERON:0005068!6.26e-23!52;UBERON:0006241!6.26e-23!52;UBERON:0007135!6.26e-23!52;UBERON:0000955!1.58e-21!50;UBERON:0006238!1.58e-21!50;UBERON:0002616!8.08e-21!49;UBERON:0003056!7.13e-20!49;UBERON:0002020!6.66e-17!34;UBERON:0003080!9.94e-17!40;UBERON:0002780!4.13e-16!39;UBERON:0001890!4.13e-16!39;UBERON:0006240!4.13e-16!39;UBERON:0002791!5.19e-14!29;UBERON:0003528!5.19e-14!29;UBERON:0001893!5.19e-14!29;UBERON:0007811!3.01e-10!86;UBERON:0000956!1.13e-09!21;UBERON:0001869!1.13e-09!21;UBERON:0000203!1.13e-09!21;UBERON:0000468!2.02e-09!333;UBERON:0000153!3.24e-08!94;UBERON:0002619!7.27e-08!17;UBERON:0002021!4.37e-07!10;UBERON:0000411!4.37e-07!10;UBERON:0001950!4.37e-07!10;UBERON:0003076!7.15e-07!12;UBERON:0003057!7.15e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,9.13e-28,95;UBERON:0000924,9.13e-28,95;UBERON:0006601,9.13e-28,95;UBERON:0002346,3.78e-27,64;UBERON:0003075,3.78e-27,64;UBERON:0007284,3.78e-27,64;UBERON:0001017,5.62e-27,73;UBERON:0001016,1.30e-26,75;UBERON:0010371,1.07e-24,73;UBERON:0000073,1.63e-24,54;UBERON:0001049,1.78e-23,52;UBERON:0005068,1.78e-23,52;UBERON:0006241,1.78e-23,52;UBERON:0007135,1.78e-23,52;UBERON:0003056,2.72e-20,49;UBERON:0000955,2.94e-20,47;UBERON:0006238,2.94e-20,47;UBERON:0010314,1.09e-19,92;UBERON:0002616,1.56e-19,46;UBERON:0002020,3.93e-17,34;UBERON:0003080,5.45e-17,40;UBERON:0002780,2.41e-16,39;UBERON:0001890,2.41e-16,39;UBERON:0006240,2.41e-16,39;UBERON:0003528,4.13e-14,29;UBERON:0002791,4.13e-14,29;UBERON:0001893,4.13e-14,29;UBERON:0000956,1.39e-09,21;UBERON:0001869,1.39e-09,21;UBERON:0000203,1.39e-09,21;UBERON:0002619,1.06e-07,17;UBERON:0002021,2.29e-07,10;UBERON:0000411,2.29e-07,10;UBERON:0001950,2.29e-07,10;UBERON:0003076,3.83e-07,12;UBERON:0003057,3.83e-07,12 | |||
|phase1_expression=6.08565618998217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.1433983142047,0.198581902401771,0.522399578277871,0.159992422793407,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0.367093504323363,2.34717403304412,8.72100625521786,0.659058548203415,0.388859798148567,1.25987779462826,1.43752564364972,0,0,0,1.28629718017973,0,0,157.199890087907,198.371617227012,155.92252526252,0.677689064138264,0,0,1.97773272513395,0,5.09320187881288,8.06858441175265,82.1221729483143,90.1839668055694,81.3957600429848,159.107598312919,159.246218026113,119.91849243144,121.436211780105,119.498442259303,134.341374819254,139.051511174769,163.590957917899,183.4538262327,172.36272054694,184.403333177093,173.651825378859,66.9687505937699,82.9694485428079,181.491208651779,170.561273597325,153.593143360048,1.59025005999687,6.04572480854284,15.9425468785923,0,0,1.07940638327563,0,0,58.5653231949405,0,0,0,3.80277233397037,1.28326477414318,2.54805239706646,0,0.216491041011214,0,0.505524445014783,10.9616524530298,3.10725460376606,13.5082346548991,11.2765462397988,12.7875500891099,11.3001593655469,15.8258772580254,12.8171690777918,10.5559936716927,0.741584903203122,15.6167305473505,15.0383793831479,7.27950824763341,19.654895142975,22.3042616442202,1.86391761218122,286.632400274305,200.859391834103,1.78819938646014,0.11981512450592,0,0,175.105257464238,112.545148293382,213.738052943982,164.090158261509,199.458056717658,141.088082255941,126.548185192851,1.2220723662038,13.6847667671102,0.505445516867349,337.548736841904,3.90361328888111,11.4951052216736,21.0672691872259,27.1268672104287,40.2776074975861,66.491020827837,59.0320864726292,759.035689748272,0.646703978798527,0.567318240503458,0.527853372491847,0.219195732427575,0.556094498451196,0,1.02891068203972,0.59710280045548,0,0,0,0.207125772535502,0.469052119962192,0.720248245844059,0.710234206755631,0.196764231747404,0.617068451549513,0.232533944750408,0.536546802799238,0.700592054203017,1.6455984991348,5.41752631461014,8.26901857367728,10.0877991323479,7.68425403518677,8.18659154438268,154.352822246069,202.72208638719,0.660837565967596,3.43785736662608,1.70630600428187,2.55460339046482,4.63922860759536,3.22693639397348,4.00280478920767,3.23383564391351,4.2707615539006,3.29397909448022,3.77002813200404,3.97912944082302,3.70431765526328,1.79763881730844,4.32276099749388,1.99141273254367,1.32767530667157,2.28497025219458,0,0.814605311381257,0.581857461502877,1.47285221769669,1.96033265085198,2.95220295959204,4.55296310739987,3.08492909804501,0.592905254174298,0.333690211432188,0.196558995113203,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0,0.274561413188081,2.87536413054709,0,0.624075346229121,0.505157755894224,2.33216637578486,0,9.05290631816363,1.32643988239339,1.62964976442026,0.678980343100753,0.938760993154008,0.502518772325447,0.476087281772027,1.36593553500459,1.89162172927429,2.21464689648775,0.797273843287435,5.73521601505083,6.21665934717224,7.37710198765709,0,0.54390568381871,4.91764273019036,1.93155722413313,246.124054451285,187.890333607302,0,82.3055222686256,5.36363973007636,4.29482618726302,21.1114929778143,1.43381278771531,4.90157082981267,3.96307143104365,5.66734982344852,16.9508397588561,16.9973744517005,224.603600178843,1.41940085208269,2.49291845134157,1.46598263418218,0.989820737835213,2.65490276679926,1.69946445308487,2.11626489875326,1.88605079755898,3.83892460745005,2.45948118355142,2.58428293168221,2.54473610634254,3.92147116223193,5.05658812697306,5.27093042874994,5.15677716240934,40.5123130847008,9.90336017172206,9.18446654857557,8.78781843629528,24.2956120089915,22.2961022002588,17.7712942250291,18.5723618959906,0.938686832254841,7.20229040936989,1.98475558249466,43.2001982706678,0.968786560175433,2.0506394475573,0.596861720015682,1.96969079694074,2.91480836629851,268.495837311218,0,0.82554747185289,0.185194527369712,0,0.136694227721025,0,0,0,0,12.4107180341965,2.21435195506795,4.26970880966382,3.67218158794124,1.67270636811575,1.74690050996942,2.15782954215713,2.47960367176008,1.83229159388821,2.59229946583586,1.24267862617385,0.56369293868419,0,0,0.972255941720238,0.904118764344118,1.68956125490778,3.0512882047896,2.604087696879,1.57289016638566,1.93267296660805,6.91272015018877,0,0.810900861160657,0.410843828659309,0,0.358053391334963,0.198681354781265,0,0.295379054349154,0.302899349844443,0.15241361331,0.504130925684203,0.292373642219257,0.192423683280659,0.116876902181569,31.9689840897448,2.88581739386284,3.3194126945506,1.67884616364078,1.54551675225752,2.62755465631655,0.73260649706906,1.07184189539533,0,292.54145447564,286.322297107464,285.874861206259,174.430980078843,141.126999072752,154.100355067499,149.854995051461,145.003427438199,153.615276645645,166.718820384086,12.350694362517,36.7102883528949,37.2199260544012,27.9572724628538,34.7957849962451,33.8272055548026,26.6696073361938,34.2018195016564,39.4730627797933,34.1141235881127,40.5566879824384,36.5935102288988,30.0589238978323,31.4363498307908,33.1977010563445,35.7220268462305,26.4216263154271,23.7278341170357,30.0822707586414,29.2925851067451,33.2583174813853,27.863701567016,29.3276513635205,26.0170085771868,26.7270640379539,25.7228407990697,28.170907822407,23.6762740294059,27.2966268830182,35.3519631144375,23.133828534214,26.2021923118999,25.3723246765207,28.6633156194037,21.798447040869,81.6880589857083,25.2646137121041,27.7183659722305,17.0246615541271,10.1472052794977,14.1439379728457 | |||
|short_description=p1@Fam57b | |||
}} |
Revision as of 11:50, 14 September 2013
Short description: | p1@Fam57b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fam57b_5end |
Coexpression cluster: | MCL_coexpression_mm9:2369 |
Association with transcript: | 0bp_to_ENSMUST00000079423, NM_029978, uc009jsy.2_5end |
EntrezGene: | Fam57b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.08e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.08e-13 | 23 |
neuron | 8.53e-13 | 33 |
neuronal stem cell | 8.53e-13 | 33 |
neuroblast | 8.53e-13 | 33 |
electrically signaling cell | 8.53e-13 | 33 |
neural cell | 4.96e-10 | 43 |
ectodermal cell | 5.52e-10 | 44 |
neurectodermal cell | 5.52e-10 | 44 |
electrically responsive cell | 1.31e-08 | 39 |
electrically active cell | 1.31e-08 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.