FFCP PHASE1:Mm9::chr7:29551856..29551868,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=64383|HGNC=|MCL_coexpression_id=293|UniProt=Q8VDQ8|association_with_transcript=70bp_to_ENSMUST00000072965_5end|description=CAGE_peak_2_at_Sirt2_5end|id=chr7:29551856..29551868,+|ontology_enrichment_celltype=CL:0000055!8.28e-15!50;CL:0002319!3.05e-12!43;CL:0000221!4.92e-12!44;CL:0000133!4.92e-12!44;CL:0000393!6.27e-10!39;CL:0000211!6.27e-10!39;CL:0000540!1.02e-07!33;CL:0000047!1.02e-07!33;CL:0000031!1.02e-07!33;CL:0000404!1.02e-07!33;CL:0002321!6.00e-07!70;CL:0000220!6.00e-07!70|ontology_enrichment_celltype_v019_2=CL:0002319,1.38e-11,43;CL:0000221,4.10e-11,44;CL:0000133,4.10e-11,44;CL:0002321,2.63e-10,70;CL:0000333,5.24e-09,10;CL:0000095,5.24e-09,10;CL:0000243,5.24e-09,10;CL:0000123,5.24e-09,10;CL:0000125,5.24e-09,10;CL:0000030,5.24e-09,10;CL:0000339,5.24e-09,10;CL:0000393,1.54e-08,39;CL:0000211,1.54e-08,39;CL:0002453,1.28e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.54e-20!75;UBERON:0001016!4.54e-20!75;UBERON:0001017!4.58e-19!73;UBERON:0005743!4.58e-19!73;UBERON:0004121!8.04e-16!102;UBERON:0000924!8.04e-16!102;UBERON:0006601!8.04e-16!102;UBERON:0001049!6.92e-13!52;UBERON:0005068!6.92e-13!52;UBERON:0006241!6.92e-13!52;UBERON:0007135!6.92e-13!52;UBERON:0002020!1.21e-11!34;UBERON:0000033!1.21e-11!63;UBERON:0000955!1.36e-11!50;UBERON:0006238!1.36e-11!50;UBERON:0002616!2.79e-11!49;UBERON:0002346!1.88e-10!71;UBERON:0003075!1.88e-10!71;UBERON:0007284!1.88e-10!71;UBERON:0002791!2.97e-09!29;UBERON:0003528!2.97e-09!29;UBERON:0001893!2.97e-09!29;UBERON:0003076!1.41e-07!12;UBERON:0003057!1.41e-07!12;UBERON:0003056!1.91e-07!49;UBERON:0002619!2.39e-07!17;UBERON:0003080!2.66e-07!40;UBERON:0002021!3.78e-07!10;UBERON:0000411!3.78e-07!10;UBERON:0001950!3.78e-07!10;UBERON:0000956!4.72e-07!21;UBERON:0001869!4.72e-07!21;UBERON:0000203!4.72e-07!21;UBERON:0002780!7.42e-07!39;UBERON:0001890!7.42e-07!39;UBERON:0006240!7.42e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.38e-24,75;UBERON:0001017,1.92e-22,73;UBERON:0004121,6.35e-18,95;UBERON:0000924,6.35e-18,95;UBERON:0006601,6.35e-18,95;UBERON:0000073,3.84e-16,54;UBERON:0001049,5.27e-15,52;UBERON:0005068,5.27e-15,52;UBERON:0006241,5.27e-15,52;UBERON:0007135,5.27e-15,52;UBERON:0002346,1.30e-12,64;UBERON:0003075,1.30e-12,64;UBERON:0007284,1.30e-12,64;UBERON:0000955,7.01e-12,47;UBERON:0006238,7.01e-12,47;UBERON:0002020,1.38e-11,34;UBERON:0002616,1.98e-11,46;UBERON:0002021,1.28e-10,10;UBERON:0000411,1.28e-10,10;UBERON:0001950,1.28e-10,10;UBERON:0010371,3.16e-10,73;UBERON:0003076,3.23e-10,12;UBERON:0003057,3.23e-10,12;UBERON:0003528,7.06e-09,29;UBERON:0002791,7.06e-09,29;UBERON:0001893,7.06e-09,29;UBERON:0002619,1.22e-08,17;UBERON:0010314,3.47e-08,92;UBERON:0003080,1.34e-07,40;UBERON:0000956,2.84e-07,21;UBERON:0001869,2.84e-07,21;UBERON:0000203,2.84e-07,21;UBERON:0002780,5.48e-07,39;UBERON:0001890,5.48e-07,39;UBERON:0006240,5.48e-07,39|phase1_expression=1.12104192973356,0.348975407639361,0,1.20985684522732,0,0.33575854382378,0.233612640595526,0,1.12630977721333,2.57470978954193,0.171217968225505,0.319088635981346,0,0.262261207256992,0.333109761815663,1.01237633694913,0,0.473193248037357,0.822686601634433,0.42438965179803,1.7008658030214,0.496454756004426,0.261199789138935,0.799962113967033,0.22940928106717,1.14846392823004,0,0,0.570070258369122,0,0,1.27006134691926,0,0,0,0,0,0,0,1.57057123192139,1.17646297606203,0,0,1.76255545165808,1.52065396829272,1.10128051297009,2.34717403304412,2.39827672018491,1.5378032791413,2.72201858703997,1.25987779462826,5.75010257459886,0.335565212115473,0.725362142011344,0,1.80081605225163,2.57880095944881,3.09403255366465,1.01158230429799,0.528990979272033,0.633831403506179,1.0165335962074,2.66788438833342,2.2497492932035,0.988866362566974,0.7104801149461,10.1864037576258,26.1268447618657,0.622137673850866,0.270011876663381,0.630974884054146,33.421165175245,28.4920417827581,0.367472397644862,0.766763768145891,0.919218786610021,1.10115880999389,5.49055553766307,5.83704826373725,0.791317726381163,0.731901148819277,1.04182674111352,5.02529398202486,2.8138130501584,4.12555268997387,3.53554302568401,5.55249555116501,0.745597783301202,3.25622631332691,1.73814588245607,2.31891590961342,0.860423876981386,2.03991400112325,0,0,0,1.40444420131752,0.340860645156116,0.259786004602869,0.70667914902068,0.422530259330042,0,2.54805239706646,0,0.216491041011214,0,0,0.34255163915718,0.776813650941515,0,0.867426633830679,0,0,0,0.352766121407114,0.628332956648377,1.48316980640624,1.01219549843938,1.76922110389975,0.970601099684455,0.441683036920787,0,0,1.75668478206928,4.60782754989601,0.255457055208591,0.11981512450592,0,0.127070227073065,4.94309110035915,6.40500843946077,0.502617408451458,1.73824320192276,5.8814555185976,6.44142938134636,17.0353326221146,0.305518091550949,0.373220911830279,0.252722758433675,1.05220927943237,0.390361328888111,0.459804208866946,0.540186389416048,0.90422890701429,0.680364991513279,0.12811372028485,0.562210347358373,5.43277078551933,0,0.5673182405034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| ||
|EntrezGene=64383 | |||
|HGNC= | |||
|MCL_coexpression_id=293 | |||
|UniProt=Q8VDQ8 | |||
|association_with_transcript=70bp_to_ENSMUST00000072965_5end | |||
|description=CAGE_peak_2_at_Sirt2_5end | |||
|id=chr7:29551856..29551868,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.28e-15!50;CL:0002319!3.05e-12!43;CL:0000221!4.92e-12!44;CL:0000133!4.92e-12!44;CL:0000393!6.27e-10!39;CL:0000211!6.27e-10!39;CL:0000540!1.02e-07!33;CL:0000047!1.02e-07!33;CL:0000031!1.02e-07!33;CL:0000404!1.02e-07!33;CL:0002321!6.00e-07!70;CL:0000220!6.00e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.38e-11,43;CL:0000221,4.10e-11,44;CL:0000133,4.10e-11,44;CL:0002321,2.63e-10,70;CL:0000333,5.24e-09,10;CL:0000095,5.24e-09,10;CL:0000243,5.24e-09,10;CL:0000123,5.24e-09,10;CL:0000125,5.24e-09,10;CL:0000030,5.24e-09,10;CL:0000339,5.24e-09,10;CL:0000393,1.54e-08,39;CL:0000211,1.54e-08,39;CL:0002453,1.28e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.54e-20!75;UBERON:0001016!4.54e-20!75;UBERON:0001017!4.58e-19!73;UBERON:0005743!4.58e-19!73;UBERON:0004121!8.04e-16!102;UBERON:0000924!8.04e-16!102;UBERON:0006601!8.04e-16!102;UBERON:0001049!6.92e-13!52;UBERON:0005068!6.92e-13!52;UBERON:0006241!6.92e-13!52;UBERON:0007135!6.92e-13!52;UBERON:0002020!1.21e-11!34;UBERON:0000033!1.21e-11!63;UBERON:0000955!1.36e-11!50;UBERON:0006238!1.36e-11!50;UBERON:0002616!2.79e-11!49;UBERON:0002346!1.88e-10!71;UBERON:0003075!1.88e-10!71;UBERON:0007284!1.88e-10!71;UBERON:0002791!2.97e-09!29;UBERON:0003528!2.97e-09!29;UBERON:0001893!2.97e-09!29;UBERON:0003076!1.41e-07!12;UBERON:0003057!1.41e-07!12;UBERON:0003056!1.91e-07!49;UBERON:0002619!2.39e-07!17;UBERON:0003080!2.66e-07!40;UBERON:0002021!3.78e-07!10;UBERON:0000411!3.78e-07!10;UBERON:0001950!3.78e-07!10;UBERON:0000956!4.72e-07!21;UBERON:0001869!4.72e-07!21;UBERON:0000203!4.72e-07!21;UBERON:0002780!7.42e-07!39;UBERON:0001890!7.42e-07!39;UBERON:0006240!7.42e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.38e-24,75;UBERON:0001017,1.92e-22,73;UBERON:0004121,6.35e-18,95;UBERON:0000924,6.35e-18,95;UBERON:0006601,6.35e-18,95;UBERON:0000073,3.84e-16,54;UBERON:0001049,5.27e-15,52;UBERON:0005068,5.27e-15,52;UBERON:0006241,5.27e-15,52;UBERON:0007135,5.27e-15,52;UBERON:0002346,1.30e-12,64;UBERON:0003075,1.30e-12,64;UBERON:0007284,1.30e-12,64;UBERON:0000955,7.01e-12,47;UBERON:0006238,7.01e-12,47;UBERON:0002020,1.38e-11,34;UBERON:0002616,1.98e-11,46;UBERON:0002021,1.28e-10,10;UBERON:0000411,1.28e-10,10;UBERON:0001950,1.28e-10,10;UBERON:0010371,3.16e-10,73;UBERON:0003076,3.23e-10,12;UBERON:0003057,3.23e-10,12;UBERON:0003528,7.06e-09,29;UBERON:0002791,7.06e-09,29;UBERON:0001893,7.06e-09,29;UBERON:0002619,1.22e-08,17;UBERON:0010314,3.47e-08,92;UBERON:0003080,1.34e-07,40;UBERON:0000956,2.84e-07,21;UBERON:0001869,2.84e-07,21;UBERON:0000203,2.84e-07,21;UBERON:0002780,5.48e-07,39;UBERON:0001890,5.48e-07,39;UBERON:0006240,5.48e-07,39 | |||
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| |||
|short_description=p2@Sirt2 | |||
}} |
Revision as of 13:05, 14 September 2013
Short description: | p2@Sirt2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sirt2_5end |
Coexpression cluster: | MCL_coexpression_mm9:293 |
Association with transcript: | 70bp_to_ENSMUST00000072965_5end |
EntrezGene: | Sirt2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.38e-11 | 43 |
ectodermal cell | 4.10e-11 | 44 |
neurectodermal cell | 4.10e-11 | 44 |
embryonic cell | 2.63e-10 | 70 |
migratory neural crest cell | 5.24e-09 | 10 |
neuron associated cell | 5.24e-09 | 10 |
glial cell (sensu Vertebrata) | 5.24e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 5.24e-09 | 10 |
glial cell | 5.24e-09 | 10 |
glioblast | 5.24e-09 | 10 |
glioblast (sensu Vertebrata) | 5.24e-09 | 10 |
electrically responsive cell | 1.54e-08 | 39 |
electrically active cell | 1.54e-08 | 39 |
oligodendrocyte precursor cell | 1.28e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.