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FFCP PHASE1:Mm9::chr7:31911969..31912011,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=20266|HGNC=|MCL_coexpression_id=1|UniProt=P97952|association_with_transcript=-5bp_to_ENSMUST00000098548,NM_011322,uc009gie.1_5end|description=CAGE_peak_2_at_Scn1b_5end|id=chr7:31911969..31912011,-|ontology_enrichment_celltype=CL:0000055!3.97e-07!50|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.03e-16!75;UBERON:0001016!4.03e-16!75;UBERON:0001017!7.06e-16!73;UBERON:0005743!7.06e-16!73;UBERON:0004121!8.81e-16!102;UBERON:0000924!8.81e-16!102;UBERON:0006601!8.81e-16!102;UBERON:0001049!1.25e-11!52;UBERON:0005068!1.25e-11!52;UBERON:0006241!1.25e-11!52;UBERON:0007135!1.25e-11!52;UBERON:0000955!2.68e-11!50;UBERON:0006238!2.68e-11!50;UBERON:0000033!7.23e-11!63;UBERON:0002616!7.78e-11!49;UBERON:0002346!2.30e-09!71;UBERON:0003075!2.30e-09!71;UBERON:0007284!2.30e-09!71;UBERON:0002021!1.54e-07!10;UBERON:0000411!1.54e-07!10;UBERON:0001950!1.54e-07!10;UBERON:0002020!2.23e-07!34;UBERON:0004111!3.45e-07!122;UBERON:0003076!5.65e-07!12;UBERON:0003057!5.65e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.33e-17,75;UBERON:0001017,2.45e-17,73;UBERON:0004121,4.79e-17,95;UBERON:0000924,4.79e-17,95;UBERON:0006601,4.79e-17,95;UBERON:0000073,4.91e-14,54;UBERON:0001049,9.03e-13,52;UBERON:0005068,9.03e-13,52;UBERON:0006241,9.03e-13,52;UBERON:0007135,9.03e-13,52;UBERON:0010371,7.79e-12,73;UBERON:0000955,1.27e-10,47;UBERON:0006238,1.27e-10,47;UBERON:0002346,2.77e-10,64;UBERON:0003075,2.77e-10,64;UBERON:0007284,2.77e-10,64;UBERON:0002616,3.88e-10,46;UBERON:0010314,1.96e-09,92;UBERON:0002020,2.49e-08,34;UBERON:0002021,4.52e-08,10;UBERON:0000411,4.52e-08,10;UBERON:0001950,4.52e-08,10;UBERON:0003076,1.86e-07,12;UBERON:0003057,1.86e-07,12;UBERON:0003080,2.82e-07,40;UBERON:0002780,8.30e-07,39;UBERON:0001890,8.30e-07,39;UBERON:0006240,8.30e-07,39|phase1_expression=5.60520964866779,0,0,0,0,0.16787927191189,0.233612640595526,1.16210991097419,2.81577444303333,7.49006484230379,0,3.58974715479014,0,0,0.333109761815663,0.202475267389826,0,0,0.137114433605739,0.42438965179803,21.3458658279185,0.297872853602656,0.261199789138935,0,0,0,0,0.215471232685889,0.190023419456374,0.756090389279792,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,5.41356317294982,7.70464677268311,5.87349606917381,17.9950009200049,5.66865406589161,18.0142669842267,8.55491555926847,7.13930750289349,8.62515386189829,0,0,0,7.97504251711436,12.0344044774278,20.1112115988203,1.61853168687678,2.64495489636016,1.26766280701236,22.0248945844936,8.00365316500025,27.4469413770827,16.8107281636386,17.7620028736525,17.9760066311043,21.1320067926855,0.207379224616955,0.405017814995072,0.420649922702764,34.5637691128602,20.3199057675484,0.61245399607477,0.0958454710182364,0,61.6648933596577,111.471046148369,83.8691671579089,1.18697658957174,1.46380229763855,0,116.698493582577,63.5921749335798,63.1056763318226,15.9099436155781,13.810053037513,3.35519002485541,1.74170244666323,4.38315048619356,4.05810284182349,4.30211938490693,0.679971333707751,2.15881276655127,1.94932925234301,0.448026887097336,31.3191056893807,7.83979483859066,7.53379413348319,5.65343319216544,3.94361575374705,0,2.54805239706646,0,0.216491041011214,1.52015919285059,2.02209778005913,7.4219521817389,0.776813650941515,2.67195850316685,1.38788261412909,1.21786191324856,1.38369298353635,0.452167921657868,1.41106448562846,2.76466500925286,0.494389935468748,8.6759614151947,15.0383793831479,6.30890714794896,28.9302389183116,23.2740121504907,1.86391761218122,64.9973369365635,96.5549318410028,0.766371165625774,0.718890747035522,0,0.508280908292259,61.4141621559773,52.1550687213234,3.64397621127307,86.738335775946,86.4318245776517,67.3233264372975,51.7549629186147,1.12023300235348,10.9478134136882,0.505445516867349,6.31325567659422,0.260240885925407,0.459804208866946,0.360124259610698,0.90422890701429,1.02054748726992,0.640568601424249,1.78033276663485,7.24369438069244,0,0.378212160335639,0.175951124163949,1.31517439456545,0.278047249225598,1.39300866608867,0.61734640922383,0.796137067273973,0,0.257347907114715,0,0.828503090142008,0.938104239924385,0.900310307305074,1.18372367792605,0.590292695242212,1.23413690309903,0.930135779001631,0.804820204198858,1.28441876603886,0.658239399653922,2.62667942526552,2.51313309592153,2.04679982395465,3.51280184465681,4.96563749413376,69.1853930775979,2.88132914661996,0.330418782983798,0.793351699990633,0.426576501070468,0,0.38660238396628,0,0.667134131534611,0.190225626112559,2.84717436926707,0.823494773620054,1.50801125280162,1.79060824837036,0.974820435595601,0.898819408654221,1.94524244887225,1.59313018603494,0.189667900953082,0.685491075658373,0,0.814605311381257,0.387904974335251,0.49095073923223,0.822074982615345,0.885660887877613,1.8839847340965,2.71473760627961,2.66807364378434,0.333690211432188,0.393117990226406,0.449724224769707,0,0.72353147925725,0.25462585178142,0.287696137450811,0.486405680325106,0.823684239564244,0,2.23284568601102,3.74445207737473,0.505157755894224,1.9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|EntrezGene=20266
|HGNC=
|MCL_coexpression_id=1
|UniProt=P97952
|association_with_transcript=-5bp_to_ENSMUST00000098548,NM_011322,uc009gie.1_5end
|description=CAGE_peak_2_at_Scn1b_5end
|id=chr7:31911969..31912011,-
|ontology_enrichment_celltype=CL:0000055!3.97e-07!50
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!4.03e-16!75;UBERON:0001016!4.03e-16!75;UBERON:0001017!7.06e-16!73;UBERON:0005743!7.06e-16!73;UBERON:0004121!8.81e-16!102;UBERON:0000924!8.81e-16!102;UBERON:0006601!8.81e-16!102;UBERON:0001049!1.25e-11!52;UBERON:0005068!1.25e-11!52;UBERON:0006241!1.25e-11!52;UBERON:0007135!1.25e-11!52;UBERON:0000955!2.68e-11!50;UBERON:0006238!2.68e-11!50;UBERON:0000033!7.23e-11!63;UBERON:0002616!7.78e-11!49;UBERON:0002346!2.30e-09!71;UBERON:0003075!2.30e-09!71;UBERON:0007284!2.30e-09!71;UBERON:0002021!1.54e-07!10;UBERON:0000411!1.54e-07!10;UBERON:0001950!1.54e-07!10;UBERON:0002020!2.23e-07!34;UBERON:0004111!3.45e-07!122;UBERON:0003076!5.65e-07!12;UBERON:0003057!5.65e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.33e-17,75;UBERON:0001017,2.45e-17,73;UBERON:0004121,4.79e-17,95;UBERON:0000924,4.79e-17,95;UBERON:0006601,4.79e-17,95;UBERON:0000073,4.91e-14,54;UBERON:0001049,9.03e-13,52;UBERON:0005068,9.03e-13,52;UBERON:0006241,9.03e-13,52;UBERON:0007135,9.03e-13,52;UBERON:0010371,7.79e-12,73;UBERON:0000955,1.27e-10,47;UBERON:0006238,1.27e-10,47;UBERON:0002346,2.77e-10,64;UBERON:0003075,2.77e-10,64;UBERON:0007284,2.77e-10,64;UBERON:0002616,3.88e-10,46;UBERON:0010314,1.96e-09,92;UBERON:0002020,2.49e-08,34;UBERON:0002021,4.52e-08,10;UBERON:0000411,4.52e-08,10;UBERON:0001950,4.52e-08,10;UBERON:0003076,1.86e-07,12;UBERON:0003057,1.86e-07,12;UBERON:0003080,2.82e-07,40;UBERON:0002780,8.30e-07,39;UBERON:0001890,8.30e-07,39;UBERON:0006240,8.30e-07,39
|phase1_expression=5.60520964866779,0,0,0,0,0.16787927191189,0.233612640595526,1.16210991097419,2.81577444303333,7.49006484230379,0,3.58974715479014,0,0,0.333109761815663,0.202475267389826,0,0,0.137114433605739,0.42438965179803,21.3458658279185,0.297872853602656,0.261199789138935,0,0,0,0,0.215471232685889,0.190023419456374,0.756090389279792,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,5.41356317294982,7.70464677268311,5.87349606917381,17.9950009200049,5.66865406589161,18.0142669842267,8.55491555926847,7.13930750289349,8.62515386189829,0,0,0,7.97504251711436,12.0344044774278,20.1112115988203,1.61853168687678,2.64495489636016,1.26766280701236,22.0248945844936,8.00365316500025,27.4469413770827,16.8107281636386,17.7620028736525,17.9760066311043,21.1320067926855,0.207379224616955,0.405017814995072,0.420649922702764,34.5637691128602,20.3199057675484,0.61245399607477,0.0958454710182364,0,61.6648933596577,111.471046148369,83.8691671579089,1.18697658957174,1.46380229763855,0,116.698493582577,63.5921749335798,63.1056763318226,15.9099436155781,13.810053037513,3.35519002485541,1.74170244666323,4.38315048619356,4.05810284182349,4.30211938490693,0.679971333707751,2.15881276655127,1.94932925234301,0.448026887097336,31.3191056893807,7.83979483859066,7.53379413348319,5.65343319216544,3.94361575374705,0,2.54805239706646,0,0.216491041011214,1.52015919285059,2.02209778005913,7.4219521817389,0.776813650941515,2.67195850316685,1.38788261412909,1.21786191324856,1.38369298353635,0.452167921657868,1.41106448562846,2.76466500925286,0.494389935468748,8.6759614151947,15.0383793831479,6.30890714794896,28.9302389183116,23.2740121504907,1.86391761218122,64.9973369365635,96.5549318410028,0.766371165625774,0.718890747035522,0,0.508280908292259,61.4141621559773,52.1550687213234,3.64397621127307,86.738335775946,86.4318245776517,67.3233264372975,51.7549629186147,1.12023300235348,10.9478134136882,0.505445516867349,6.31325567659422,0.260240885925407,0.459804208866946,0.360124259610698,0.90422890701429,1.02054748726992,0.640568601424249,1.78033276663485,7.24369438069244,0,0.378212160335639,0.175951124163949,1.31517439456545,0.278047249225598,1.39300866608867,0.61734640922383,0.796137067273973,0,0.257347907114715,0,0.828503090142008,0.938104239924385,0.900310307305074,1.18372367792605,0.590292695242212,1.23413690309903,0.930135779001631,0.804820204198858,1.28441876603886,0.658239399653922,2.62667942526552,2.51313309592153,2.04679982395465,3.51280184465681,4.96563749413376,69.1853930775979,2.88132914661996,0.330418782983798,0.793351699990633,0.426576501070468,0,0.38660238396628,0,0.667134131534611,0.190225626112559,2.84717436926707,0.823494773620054,1.50801125280162,1.79060824837036,0.974820435595601,0.898819408654221,1.94524244887225,1.59313018603494,0.189667900953082,0.685491075658373,0,0.814605311381257,0.387904974335251,0.49095073923223,0.822074982615345,0.885660887877613,1.8839847340965,2.71473760627961,2.66807364378434,0.333690211432188,0.393117990226406,0.449724224769707,0,0.72353147925725,0.25462585178142,0.287696137450811,0.486405680325106,0.823684239564244,0,2.23284568601102,3.74445207737473,0.505157755894224,1.97337154874103,1.4473305640901,1.29327233116623,0.189491411770485,0.325929952884052,0.169745085775188,0,0.167506257441816,0.952174563544055,0.585400943573396,0.945810864637146,0.8858587585951,0.637819074629948,1.80249646187312,3.10832967358612,1.15719246865209,0,1.63171705145613,3.44234991113325,2.75936746304733,78.9908902739936,64.5836393123039,1.80328439914343,105.785318498632,1.26203287766503,1.56175497718655,2.80050417052639,1.67278158566786,4.45597348164788,4.24614796183249,0.404810701674894,4.09158201075837,2.76701444562566,24.4204200480573,2.55492153374884,3.02711526234334,1.14020871547503,3.13443233647817,1.32745138339963,0,0.906970670894253,0.565815239267694,0.885905678642318,0.307435147943927,1.03371317267288,0.727067458955011,1.42598951353889,2.21225730555071,1.05418608574999,2.06271086496374,3.74483566329167,0.36012218806262,0.646793418913773,1.07168517515796,1.24138163549592,4.99432689285798,4.77192159746151,2.43571959291679,1.64270195644597,0.63549621259146,1.10264199027481,8.244312647074,2.58343082713449,2.17126529741361,1.79058516004705,2.1338316966858,1.45740418314925,66.3822581197625,3.93003025835061,1.03193433981611,0.740778109478847,2.26042148405629,0.956859594047176,2.0590035588587,7.64902934972349,5.59805809294632,10.9177979305495,0.954670618015114,0.158167996790568,1.21991680276109,0.432021363287205,0.418176592028937,0.655087691238533,0.809186078308924,1.65306911450672,3.66458318777641,2.20345454596048,10.5627683224777,0,0.299033092087958,0.496375471371293,0,0.645799117388655,0.168956125490778,0.352071715937262,0.651021924219751,0.209718688851422,0.241584120826006,13.5374102941197,0.316011120628178,0.810900861160657,1.54066435747241,0.909445760844565,0.358053391334963,0,0.240390899039938,0.147689527174577,0.302899349844443,0.304827226619999,0.302478555410522,0.194915761479505,0.384847366561318,0.350630706544707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|short_description=p2@Scn1b
}}

Revision as of 13:19, 14 September 2013

Short description:p2@Scn1b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Scn1b_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -5bp_to_ENSMUST00000098548, NM_011322, uc009gie.1_5end
EntrezGene:Scn1b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Scn1b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.61
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.16
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.82
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.49
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.59
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A321.35
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.41
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.70
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.87
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B718.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.67
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B818.01
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.55
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.98
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E112.03
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C520.11
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C622.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C727.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E716.81
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D217.76
Mouse Microglia, donor1.CNhs12629.11718-123C817.98
Mouse Microglia, donor2.CNhs12634.11736-123E821.13
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F134.56
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D520.32
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D361.66
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3111.47
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D783.87
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4116.70
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E563.59
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I663.11
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D615.91
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F613.81
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.36
Mouse Schwann, donor1.CNhs12507.11728-123D91.74
Mouse Schwann, donor2.CNhs12573.11746-123F94.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.06
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A731.32
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I77.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I85.65
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.94
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.42
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D72.67
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C11.41
adrenal gland, neonate N25.CNhs11223.1377-27I32.76
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H18.68
bone (os femoris), adult.CNhs10483.56-12G215.04
bone (os femoris), neonate N02.CNhs11227.1985-43F56.31
bone (os femoris), neonate N16.CNhs11225.1525-43A628.93
bone (os femoris), neonate N20.CNhs11195.1350-25C323.27
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B265.00
cerebellum, neonate N30.CNhs11135.1395-42I296.55
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A461.41
corpus striatum, adult.CNhs10487.19-21D852.16
corpus striatum, neonate N00.CNhs11226.630-43F13.64
cortex, adult.CNhs10473.12-14D586.74
cortex, neonate N30.CNhs11107.1392-42F286.43
diencephalon, adult.CNhs10482.20-12F267.32
diencephalon, neonate N30.CNhs11201.1388-42B251.75
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A210.95
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G46.31
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C61.02
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G81.78
eyeball, neonate N16.CNhs11188.777-19A27.24
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E31.28
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G12.63
heart, neonate N16.CNhs11209.782-15G12.51
heart, neonate N20.CNhs11127.821-26I62.05
heart, neonate N25.CNhs11196.1351-25D33.51
heart, neonate N30.CNhs11202.1390-42D24.97
hippocampus, adult.CNhs10478.13-16E869.19
hippocampus, neonate N00.CNhs11228.627-43G12.88
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.79
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.95
intestine, neonate N30.CNhs11131.1384-42G11.59
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.82
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F31.88
kidney, neonate N30.CNhs11203.1385-42H12.71
liver, adult pregnant day01.CNhs10466.508-5B22.67
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B93.74
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H11.97
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A41.80
lung, neonate N25.CNhs11119.1359-25C73.11
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H22.76
medulla oblongata, adult.CNhs10477.17-12C278.99
medulla oblongata, neonate N30.CNhs11200.1396-42A364.58
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.80
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2105.79
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.80
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.46
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.09
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I924.42
ovary, adult.CNhs10507.91-2I72.55
ovary, embryo E18.CNhs11040.505-44H73.03
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G63.13
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F64.99
pituitary gland, embryo E17.CNhs11039.1265-44F54.77
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C38.24
skin, neonate N00.CNhs11124.650-25G42.58
skin, neonate N03.CNhs11215.662-22H32.17
skin, neonate N06.CNhs11097.693-20I51.79
skin, neonate N10.CNhs11108.762-6C42.13
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C966.38
spleen, adult.CNhs10465.25-2G23.93
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D12.26
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C67.65
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D310.92
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A91.65
stomach, neonate N25.CNhs11104.1355-25E43.66
stomach, neonate N30.CNhs11134.1386-42I12.20
submandibular gland, adult.CNhs10469.59-29C110.56
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E213.54
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I21.54
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B449.43
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.59
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G58.90
urinary bladder, adult.CNhs10481.879-12E44.64
uterus, adult pregnant day19.CNhs10497.590-15F56.01
uterus, adult.CNhs10509.92-27E52.38
vagina, adult.CNhs10502.89-27D53.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A133.89
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A245.57
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A338.38
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D765.30
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A481.52
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5103.49
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A683.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A795.02
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A892.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A999.93
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.44
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.01
whole body, embryo E17.5.CNhs10513.490-9F92.70
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C23.22
whole body, neonate N01.CNhs10576.659-23C65.36
whole body, neonate N06.CNhs10515.692-21D119.19
whole body, neonate N10.CNhs10518.761-6B421.56





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system1.33e-1775
central nervous system2.45e-1773
ectoderm-derived structure4.79e-1795
ectoderm4.79e-1795
presumptive ectoderm4.79e-1795
regional part of nervous system4.91e-1454
neural tube9.03e-1352
neural rod9.03e-1352
future spinal cord9.03e-1352
neural keel9.03e-1352
ecto-epithelium7.79e-1273
brain1.27e-1047
future brain1.27e-1047
neurectoderm2.77e-1064
neural plate2.77e-1064
presumptive neural plate2.77e-1064
regional part of brain3.88e-1046
structure with developmental contribution from neural crest1.96e-0992
gray matter2.49e-0834
occipital lobe4.52e-0810
visual cortex4.52e-0810
neocortex4.52e-0810
posterior neural tube1.86e-0712
chordal neural plate1.86e-0712
anterior neural tube2.82e-0740
regional part of forebrain8.30e-0739
forebrain8.30e-0739
future forebrain8.30e-0739







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