FFCP PHASE1:Hg19::chr1:79219369..79219376,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:79219369..79219376,+ | |||
|id=chr1:79219369..79219376,+ | |||
|ontology_enrichment_celltype=CL:0000359!1.72e-26!32;CL:0002539!7.76e-20!10;CL:0000192!2.47e-19!42;CL:0000514!2.47e-19!42;CL:0000569!1.08e-17!4;CL:0000011!1.08e-17!4;CL:0000680!1.88e-17!57;CL:0000056!1.88e-17!57;CL:0000355!1.88e-17!57;CL:0000187!2.94e-14!54;CL:0000183!9.30e-13!59;CL:0000393!1.73e-12!60;CL:0000211!1.73e-12!60;CL:0002494!1.81e-12!16;CL:0002589!9.54e-10!2;CL:0000048!5.58e-09!430;CL:0000723!9.94e-09!436;CL:0000034!2.09e-08!444;CL:0000055!1.64e-07!180;CL:0002592!5.44e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000569;1.27e-20;4!CL:0000359;5.26e-19;32!CL:0002589;4.48e-18;2!CL:0002494;7.52e-14;16!CL:0002592;5.50e-13;3!CL:0002568;6.61e-10;1!CL:0000134;1.54e-09;55!CL:0000192;5.73e-09;43!CL:0000048;8.02e-09;58!CL:0000723;1.21e-08;61!CL:0002539;1.86e-08;10!CL:0000034;1.99e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,8.19e-21,32;CL:0000569,1.50e-20,4;CL:0000011,1.50e-20,4;CL:0002589,2.90e-18,2;CL:0000192,3.61e-15,43;CL:0000514,3.61e-15,43;CL:0002494,8.06e-14,16;CL:0000680,1.91e-13,58;CL:0000056,1.91e-13,58;CL:0000355,1.91e-13,58;CL:0002592,5.51e-13,3;CL:0000187,1.40e-11,55;CL:0000393,2.58e-10,61;CL:0000211,2.58e-10,61;CL:0002568,1.07e-09,1;CL:0002539,1.96e-08,10 | |||
|ontology_enrichment_development_v019=CL:0000011;1.27e-20;4!CL:0000514;5.73e-09;43!CL:0000355;9.27e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!1.13e-28!14;DOID:120!6.25e-20!27;DOID:193!2.25e-18!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.55e-29;14!DOID:120;5.41e-15;27!DOID:193;6.55e-14;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.56e-29,14;DOID:120,5.42e-15,27;DOID:193,6.56e-14,29 | |||
|ontology_enrichment_uberon=UBERON:0004573!2.30e-22!33;UBERON:0004571!2.30e-22!33;UBERON:0001637!2.84e-22!42;UBERON:0003509!2.84e-22!42;UBERON:0004572!2.84e-22!42;UBERON:0004237!7.76e-20!10;UBERON:0004695!7.76e-20!10;UBERON:0002111!7.76e-20!10;UBERON:0004178!7.76e-20!10;UBERON:0004872!2.67e-17!84;UBERON:0001134!4.82e-16!61;UBERON:0002036!4.82e-16!61;UBERON:0003082!4.82e-16!61;UBERON:0002385!2.09e-15!63;UBERON:0001015!2.09e-15!63;UBERON:0000383!2.09e-15!63;UBERON:0000992!2.16e-15!13;UBERON:0001981!1.90e-14!60;UBERON:0007500!1.90e-14!60;UBERON:0004537!1.90e-14!60;UBERON:0006965!1.90e-14!60;UBERON:0002118!5.51e-14!5;UBERON:0004532!5.51e-14!5;UBERON:0000914!7.97e-14!83;UBERON:0002329!7.97e-14!83;UBERON:0003077!7.97e-14!83;UBERON:0003059!7.97e-14!83;UBERON:0007282!7.97e-14!83;UBERON:0009618!7.97e-14!83;UBERON:0007285!7.97e-14!83;UBERON:0004290!1.83e-13!70;UBERON:0001135!6.76e-13!15;UBERON:0003914!3.99e-12!118;UBERON:0000055!4.44e-12!69;UBERON:0004535!5.08e-12!110;UBERON:0000947!1.04e-11!21;UBERON:0010191!1.04e-11!21;UBERON:0001009!1.43e-11!113;UBERON:0000486!6.41e-11!82;UBERON:0002119!2.02e-10!4;UBERON:0004531!2.02e-10!4;UBERON:0002049!4.34e-10!79;UBERON:0007798!4.34e-10!79;UBERON:0001529!9.54e-10!2;UBERON:0007204!9.54e-10!2;UBERON:0000991!3.85e-09!21;UBERON:0009196!3.85e-09!21;UBERON:0009117!3.85e-09!21;UBERON:0005564!3.85e-09!21;UBERON:0004176!1.11e-08!22;UBERON:0000948!5.72e-08!24;UBERON:0005498!5.72e-08!24;UBERON:0004140!5.72e-08!24;UBERON:0009881!5.72e-08!24;UBERON:0004141!5.72e-08!24;UBERON:0003084!5.72e-08!24;UBERON:0007005!5.72e-08!24;UBERON:0004139!5.72e-08!24;UBERON:0004291!5.72e-08!24;UBERON:0005256!4.43e-07!143;UBERON:0001621!5.44e-07!3;UBERON:0007100!5.69e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0001529;4.48e-18;2!UBERON:0007204;4.48e-18;2!UBERON:0004573;9.68e-18;33!UBERON:0004571;9.68e-18;33!UBERON:0000992;1.16e-16;13!UBERON:0002118;3.63e-16;5!UBERON:0001637;1.35e-14;42!UBERON:0003509;1.35e-14;42!UBERON:0004572;1.35e-14;42!UBERON:0003498;5.50e-13;3!UBERON:0005985;5.50e-13;3!UBERON:0001621;5.50e-13;3!UBERON:0000991;2.87e-10;21!UBERON:0000948;4.97e-10;22!UBERON:0002119;8.44e-10;4!UBERON:0007100;8.37e-09;25!UBERON:0004237;1.86e-08;10!UBERON:0004695;1.86e-08;10!UBERON:0002111;1.86e-08;10!UBERON:0004178;1.86e-08;10!UBERON:0000947;6.65e-07;21!UBERON:0010191;6.65e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,3.09e-20,33;UBERON:0004571,3.09e-20,33;UBERON:0001637,2.74e-19,42;UBERON:0003509,2.74e-19,42;UBERON:0004572,2.74e-19,42;UBERON:0001529,2.90e-18,2;UBERON:0007204,2.90e-18,2;UBERON:0000992,8.90e-17,13;UBERON:0002118,2.33e-16,5;UBERON:0004872,1.20e-15,83;UBERON:0007500,2.71e-13,59;UBERON:0001981,2.71e-13,59;UBERON:0004537,2.71e-13,59;UBERON:0006965,2.71e-13,59;UBERON:0001621,5.51e-13,3;UBERON:0001134,1.77e-12,62;UBERON:0002036,1.77e-12,62;UBERON:0003082,1.77e-12,62;UBERON:0002385,4.85e-12,64;UBERON:0001015,4.85e-12,64;UBERON:0000383,4.85e-12,64;UBERON:0004535,2.18e-11,109;UBERON:0000055,2.48e-11,68;UBERON:0001009,5.05e-11,112;UBERON:0002329,1.06e-10,71;UBERON:0003059,1.06e-10,71;UBERON:0007282,1.06e-10,71;UBERON:0004290,1.06e-10,71;UBERON:0009618,1.06e-10,71;UBERON:0003077,1.56e-10,72;UBERON:0007285,1.56e-10,72;UBERON:0003914,1.86e-10,117;UBERON:0007524,2.28e-10,73;UBERON:0000991,2.45e-10,21;UBERON:0009196,2.45e-10,21;UBERON:0009117,2.45e-10,21;UBERON:0005564,2.45e-10,21;UBERON:0004176,7.36e-10,22;UBERON:0002119,8.63e-10,4;UBERON:0002049,1.11e-09,78;UBERON:0007798,1.11e-09,78;UBERON:0007503,1.32e-09,78;UBERON:0000948,3.69e-09,24;UBERON:0005498,3.69e-09,24;UBERON:0004140,3.69e-09,24;UBERON:0009881,3.69e-09,24;UBERON:0004141,3.69e-09,24;UBERON:0003084,3.69e-09,24;UBERON:0007005,3.69e-09,24;UBERON:0004139,3.69e-09,24;UBERON:0004291,3.69e-09,24;UBERON:0000486,6.20e-09,83;UBERON:0004237,1.96e-08,10;UBERON:0004695,1.96e-08,10;UBERON:0002111,1.96e-08,10;UBERON:0004178,1.96e-08,10;UBERON:0003498,3.87e-08,5;UBERON:0005985,3.87e-08,5;UBERON:0007100,4.04e-08,27;UBERON:0000926,8.48e-08,315;UBERON:0004120,8.48e-08,315;UBERON:0006603,8.48e-08,315;UBERON:0000947,6.87e-07,21;UBERON:0010191,6.87e-07,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6893005858071,1.20538905604795,0.730310090387373,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.82600395578163,0,0,0,0,0.74000264525148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03417372606222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01346914667305,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0.308033580176089,4.25844824253617,0,1.48259375283136,1.28812398067792,0,0,0,0,0,0,0,0,0,0,6.87420437349274,0,6.7401352998237,0,1.46228093778771,0,0,0,0,0,0,0.876901770507525,0,0,0.202910376962704,0,0,0,0,1.426684205925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0.251567901752575,0,19.6802458821354,0.302461847526478,1.08806040407946,24.6918100482689,0.955780602982214,57.5747983569414,1.24210365501008,0,1.06336685823198,1.04349012362347,0.450772826991655,0,1.62748293281865,1.45478927362048,0.214821114084977,0,2.78667122089031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:79219369..79219376,+ | |||
}} |
Revision as of 19:14, 10 January 2014
Short description: | p@chr1:79219369..79219376, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:79219369..79219376, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 8.19e-21 | 32 |
cardiac mesenchymal cell | 1.50e-20 | 4 |
migratory trunk neural crest cell | 1.50e-20 | 4 |
smooth muscle cell of the brachiocephalic vasculature | 2.90e-18 | 2 |
smooth muscle cell | 3.61e-15 | 43 |
smooth muscle myoblast | 3.61e-15 | 43 |
cardiocyte | 8.06e-14 | 16 |
muscle precursor cell | 1.91e-13 | 58 |
myoblast | 1.91e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.91e-13 | 58 |
smooth muscle cell of the coronary artery | 5.51e-13 | 3 |
muscle cell | 1.40e-11 | 55 |
electrically responsive cell | 2.58e-10 | 61 |
electrically active cell | 2.58e-10 | 61 |
mesenchymal stem cell of Wharton's jelly | 1.07e-09 | 1 |
aortic smooth muscle cell | 1.96e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.56e-29 | 14 |
female reproductive organ cancer | 5.42e-15 | 27 |
reproductive organ cancer | 6.56e-14 | 29 |