FFCP PHASE1:Hg19::chr1:243865409..243865412,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:243865409..243865412,- | |||
|id=chr1:243865409..243865412,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.55e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;2.47e-19;1!DOID:3350;2.37e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,4.69e-19,1;DOID:3350,3.27e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0002616!8.10e-13!59;UBERON:0001049!1.37e-12!57;UBERON:0005068!1.37e-12!57;UBERON:0006241!1.37e-12!57;UBERON:0007135!1.37e-12!57;UBERON:0002780!1.64e-12!41;UBERON:0001890!1.64e-12!41;UBERON:0006240!1.64e-12!41;UBERON:0000955!2.02e-12!69;UBERON:0006238!2.02e-12!69;UBERON:0003080!5.21e-12!42;UBERON:0001017!1.29e-10!82;UBERON:0002020!2.53e-10!34;UBERON:0003528!2.53e-10!34;UBERON:0005743!3.45e-10!86;UBERON:0001893!3.46e-10!34;UBERON:0003075!6.71e-10!86;UBERON:0007284!6.71e-10!86;UBERON:0002791!9.52e-10!33;UBERON:0002346!1.02e-09!90;UBERON:0000073!3.05e-09!94;UBERON:0001016!3.05e-09!94;UBERON:0001869!5.10e-09!32;UBERON:0003056!3.05e-08!61;UBERON:0007023!3.77e-08!115;UBERON:0000956!2.39e-07!25;UBERON:0000203!2.39e-07!25;UBERON:0002619!9.23e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001871;9.38e-24;6!UBERON:0002619;9.64e-20;22!UBERON:0000956;1.74e-17;25!UBERON:0000203;1.74e-17;25!UBERON:0000349;2.17e-15;5!UBERON:0001950;3.69e-14;20!UBERON:0002791;4.24e-13;32!UBERON:0001869;4.24e-13;32!UBERON:0003528;3.41e-12;34!UBERON:0002020;3.41e-12;34!UBERON:0001893;3.41e-12;34!UBERON:0001876;2.37e-10;2!UBERON:0001954;2.37e-10;2!UBERON:0003022;2.37e-10;2!UBERON:0002421;2.37e-10;2!UBERON:0002600;2.37e-10;2!UBERON:0002780;6.40e-10;41!UBERON:0001890;6.40e-10;41!UBERON:0000073;1.69e-08;53!UBERON:0002616;1.69e-08;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001871,7.73e-24,6;UBERON:0002619,8.25e-20,22;UBERON:0000956,1.52e-17,25;UBERON:0000203,1.52e-17,25;UBERON:0000349,1.40e-15,5;UBERON:0001950,3.39e-14,20;UBERON:0002791,7.47e-14,32;UBERON:0001869,7.47e-14,32;UBERON:0003528,4.55e-13,34;UBERON:0002020,4.55e-13,34;UBERON:0001893,4.55e-13,34;UBERON:0000073,5.50e-12,53;UBERON:0002616,5.50e-12,53;UBERON:0001049,2.39e-11,56;UBERON:0005068,2.39e-11,56;UBERON:0006241,2.39e-11,56;UBERON:0007135,2.39e-11,56;UBERON:0002780,6.63e-11,41;UBERON:0001890,6.63e-11,41;UBERON:0003080,6.63e-11,41;UBERON:0006240,6.63e-11,41;UBERON:0001876,1.57e-10,2;UBERON:0001954,2.07e-10,2;UBERON:0003022,2.07e-10,2;UBERON:0002421,2.07e-10,2;UBERON:0002600,2.07e-10,2;UBERON:0000955,3.29e-09,68;UBERON:0006238,3.29e-09,68;UBERON:0001017,9.82e-08,81;UBERON:0003075,9.82e-08,82;UBERON:0007284,9.82e-08,82;UBERON:0003056,2.14e-07,61;UBERON:0002346,2.28e-07,86;UBERON:0001016,5.91e-07,89 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0.619412741790207,0,0,0,0.344745680736619,0.645484683583826,0,0,0.545812300115692,0,0,0,0.639337125799041,0,0.598390972864896,0,0.290209238628584,0.56738522469114,0.622822248995575,0,0,0,0,0.368277635987565,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,1.28019066769952,0,0,0,0,0,0.587237189370939,1.14681968437569,0,0,0,0.786839080455332,0.393010762749165,0.411202997999018,0,0,0.473447805734733,1.94826728407911,0,0,0,0,0.25618263945135,0.130059347559878,0.164437904603676,0.276350017785848,0,0.14828656316206,0.267540828089713,0,0.113309342697566,0,0,0.759059076058509,0,0.651083453856419,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0.66944122552934,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0,0,0,0.0974370051611986,0.504867548488229,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0.246217006087397,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0.205476322550383,0,0,0,0.215627574859517,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0,0,0,0.82707210449155,0.647142602455851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0.38126038784765,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0.213425530045242,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,1.9882952955326,0,0,0,0,0.19924798825107,0,0.251932747854276,0.409074730008619,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.361789315876224,0,0,1.77328571372128,0.219385397153973,0,0,0.923403102045565,0.113942055847001,0,0.0897576444097721,0.108647371922008,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0.649165919226273,0,0.0884575645033392,0,0.889563386041866,0.123563938946503,0.208843899010911,0.202203398942031,0.802577647298789,0.234264445725339,0.182454789215666,0,0.485560759068186,0.394584402849391,1.20990716048664,1.22429104652196,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.698906672968121,1.0319161948297,0,0,0,0,0.264768380074501,0.225980740780532,0.137041924646751,0,0.443175571691151,0,0,0.213452994739353,0.39961921916426,0,0.114536596165916,1.02956998717179,0,0,0,0,0.104602846312333,0,0,0,0.136905378891993,0,0.429765441419957,0,0.558564802544508,0,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,1.59045937961861,0.136203406111576,0.160753148465019,0.137539436597234,0,0,0,0.182248669974074,0,0,0,0.316801009558219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0.342173675768659,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0.573409195690071,0.221858103073705,0.124192805882767,0.276697269872462,0,0,0.285465333544967,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0.414706207840855,0,0,0,0,0,0.181848659202559,0.322231671127465,0.464033759878494,0.398095888698616,0,0,0,0,0,0.428883182749851,0,0.226705925512272,0,0,0,0,0,0,0.192914038270915,0.168942440653073,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0.637724760305049,0,0,0,0.23658523500376,0,0,0,0.0642292250964595,0,0.159633859057151,0,0.504143392443436,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,2.18789923607288,0,0,0,0,0.535701835878287,0,0,0.227662191351298,0.0887023701626388,0,0.685952037749674,0.203909198930495,0.131545547125698,0,0.111231401892069,0,0.628462359664008,0,0,0,0,0.142953088353313,0.47404083519818,0.116241425368125,0.173858272302579,0,0,0,0,0,0.118332000730565,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0.795803100645473,0.118920090777569,0.22589216407792,0.219881033490858,0.150962843566674,0.0771741581079447,0,0.470317296361523,0.980593287015622,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0.730336388246517,0,0.286679166302903,0,0.0679914901909147,0.872701380680755,0,0,0,0,0.126166424835079,0.109265571963696,0.253397002022874,0,0.26721740526556,0.18378979906969,0,0,0.26796413015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| |||
|short_description=p@chr1:243865409..243865412,- | |||
}} |
Revision as of 01:06, 11 January 2014
Short description: | p@chr1:243865409..243865412, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:243865409..243865412, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
temporal lobe | 7.73e-24 | 6 |
regional part of cerebral cortex | 8.25e-20 | 22 |
cerebral cortex | 1.52e-17 | 25 |
pallium | 1.52e-17 | 25 |
limbic system | 1.40e-15 | 5 |
neocortex | 3.39e-14 | 20 |
regional part of telencephalon | 7.47e-14 | 32 |
cerebral hemisphere | 7.47e-14 | 32 |
brain grey matter | 4.55e-13 | 34 |
gray matter | 4.55e-13 | 34 |
telencephalon | 4.55e-13 | 34 |
regional part of nervous system | 5.50e-12 | 53 |
regional part of brain | 5.50e-12 | 53 |
neural tube | 2.39e-11 | 56 |
neural rod | 2.39e-11 | 56 |
future spinal cord | 2.39e-11 | 56 |
neural keel | 2.39e-11 | 56 |
regional part of forebrain | 6.63e-11 | 41 |
forebrain | 6.63e-11 | 41 |
anterior neural tube | 6.63e-11 | 41 |
future forebrain | 6.63e-11 | 41 |
amygdala | 1.57e-10 | 2 |
Ammon's horn | 2.07e-10 | 2 |
lobe parts of cerebral cortex | 2.07e-10 | 2 |
hippocampal formation | 2.07e-10 | 2 |
limbic lobe | 2.07e-10 | 2 |
brain | 3.29e-09 | 68 |
future brain | 3.29e-09 | 68 |
central nervous system | 9.82e-08 | 81 |
neural plate | 9.82e-08 | 82 |
presumptive neural plate | 9.82e-08 | 82 |
pre-chordal neural plate | 2.14e-07 | 61 |
neurectoderm | 2.28e-07 | 86 |
nervous system | 5.91e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 4.69e-19 | 1 |
mesenchymal cell neoplasm | 3.27e-10 | 2 |