FFCP PHASE1:Hg19::chr10:73587830..73587856,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C143 | |||
|description=CAGE_peak_at_chr10:73587830..73587856,+ | |||
|id=chr10:73587830..73587856,+ | |||
|ontology_enrichment_celltype=CL:0002194!5.37e-24!63;CL:0000576!5.37e-24!63;CL:0000040!5.37e-24!63;CL:0000559!5.37e-24!63;CL:0002009!1.99e-23!65;CL:0002057!6.76e-21!42;CL:0000839!1.13e-19!70;CL:0000557!4.67e-19!71;CL:0000860!8.13e-19!45;CL:0000766!8.62e-17!76;CL:0000763!3.05e-07!112;CL:0000049!3.05e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000473;7.26e-36;39!CL:0000234;7.26e-36;39!CL:0000860;1.69e-32;33!CL:0002057;1.69e-32;33!CL:0000576;1.77e-27;48!CL:0000766;4.93e-17;69!CL:0000235;8.26e-12;6!CL:0000763;2.15e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,4.97e-54,59;CL:0000576,4.97e-54,59;CL:0000040,4.97e-54,59;CL:0000559,4.97e-54,59;CL:0000473,3.90e-52,48;CL:0000234,3.90e-52,48;CL:0002009,8.99e-52,61;CL:0000839,1.00e-46,66;CL:0000557,8.32e-46,67;CL:0000766,1.46e-43,72;CL:0000860,6.62e-42,42;CL:0002057,6.62e-42,42;CL:0000763,3.05e-25,108;CL:0000049,3.05e-25,108;CL:0002087,9.92e-22,115;CL:0002031,3.45e-19,120;CL:0000738,4.01e-17,136;CL:0002032,2.60e-12,161;CL:0000837,2.60e-12,161;CL:0000235,5.28e-12,6;CL:0000037,6.16e-12,168;CL:0000988,2.10e-11,177;CL:0002320,2.61e-07,361;CL:0002393,7.16e-07,9;CL:0002397,7.16e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.38e-29;42!CL:0000049;1.30e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.18e-15!80;UBERON:0001474!1.60e-14!86;UBERON:0004765!5.99e-13!101;UBERON:0001434!5.99e-13!101;UBERON:0002405!4.82e-12!115;UBERON:0002390!6.87e-12!102;UBERON:0003061!6.87e-12!102;UBERON:0002193!4.31e-11!112;UBERON:0000468!8.86e-11!659;UBERON:0003081!3.51e-10!216;UBERON:0000922!1.89e-09!612;UBERON:0002204!1.96e-09!167;UBERON:0000480!2.13e-09!626;UBERON:0000467!2.25e-09!625;UBERON:0000926!3.45e-09!448;UBERON:0004120!3.45e-09!448;UBERON:0006603!3.45e-09!448;UBERON:0002050!5.15e-09!605;UBERON:0005423!5.15e-09!605;UBERON:0000923!6.98e-09!604;UBERON:0005291!6.98e-09!604;UBERON:0006598!6.98e-09!604;UBERON:0002532!6.98e-09!604;UBERON:0000062!2.92e-08!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.26e-38,76;UBERON:0004765,8.57e-37,90;UBERON:0001474,1.89e-36,82;UBERON:0001434,1.97e-36,100;UBERON:0002390,2.35e-31,98;UBERON:0003061,2.35e-31,98;UBERON:0002405,2.15e-30,93;UBERON:0002193,2.15e-28,108;UBERON:0002204,1.11e-22,167;UBERON:0003081,1.07e-18,203;UBERON:0000926,3.68e-14,315;UBERON:0004120,3.68e-14,315;UBERON:0006603,3.68e-14,315;UBERON:0000923,4.82e-07,560;UBERON:0010316,4.82e-07,560;UBERON:0005291,4.82e-07,560;UBERON:0006598,4.82e-07,560;UBERON:0010317,4.82e-07,560;UBERON:0002532,4.82e-07,560;UBERON:0002050,7.98e-07,564;UBERON:0005423,8.63e-07,581 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.281908808191942,2.00146596706261,1.34088328328186,0.872338524100369,0,0,1.56711376919903,0.491467873003018,1.39560233594486,0.436882744260345,0.527533956456907,0.247532705920093,1.65698687863958,0.672325146451775,1.80808358407193,0.730310090387373,0,0.123121058076788,0.204000691244253,1.56727360739044,0,0.547497700291537,0.376627918784408,0.0764134057479513,0,0.0787107813136792,0,0,0.928896739896456,0,0.30120591877825,0.369754010166788,0,0,0,0,0.601633342410425,0.651032612147555,4.70222495903841,2.59114932815184,1.54545340580512,3.05336301437086,1.51150377475524,2.91100873425379,4.18372266430232,0.822335776043652,2.78735733805593,3.74000110018796,2.81776777182011,1.41889337933151,4.48169384957604,1.93645405075148,0,2.44715041405386,1.91034305040492,2.47195832889593,4.28517449319264,0.962787081228281,5.11469700639233,2.96866170168044,1.79517291859469,2.13112375266347,6.67481248845743,1.70215567407342,1.24564449799115,1.7587406567972,3.65038042894141,1.73751075764093,2.42159801053347,0.368277635987565,1.26584954976354,1.47878700418359,3.18906449947565,3.56419697364239,1.12328631146495,2.25265339262259,0.32145117339416,1.42506371870624,1.79025009479181,4.01861138282195,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0.393010762749165,0.411202997999018,0,0,0,0,0,0.294605907474837,0.221533894583621,0,0.25618263945135,0.260118695119756,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0.267440195783507,0,0,1.34140171940727,0.255725123687061,0.722878304769133,0.50133791063589,0.144846518960824,0,0,0.189069634328136,1.10864698731282,0.351339142772504,0.261958150995425,0,0,3.57002133020152,1.39303789839414,3.45690697349049,0.476981248610684,0,0.371457501329565,0,0,0.347140501607594,0.56530794192401,0.419499436209906,0.275118041940067,0.208994966536811,0.775250277507987,0.35576626268671,0,0.402829317109147,0,0.976248230192678,0.735326160691737,1.62028389576352,0.267899184852239,0.44905874525234,0.450445921933289,0,0,0.549605231791222,1.31780417436063,0,0,0.496971951695318,0.25326102332916,0.264818361626438,0.860509862246441,0.709336764396714,0,0,0.24666754841716,0,0.269421344139376,0.163461903113459,0.302714855289863,1.15235184896,0,0.312160076830321,0,0.747243402759005,0.117434498643765,0.161872944368132,0,0,0.245668634623536,0.103325781175765,0,0.741800787835671,0,0,0,0,0,0.438977620880838,1.22595118319608,0.45071417671979,0.113432183160021,0,0,0.635795703478686,0.900273288253207,0.309157587715317,0.515281080091258,0.18611685633159,0.337552664482532,0,0,0.0920498986422993,0,0.355009592516614,0,0.169560592310488,0.193260853163297,0,0.286804595389004,0.121973706129595,0,0.232387885739037,0.414644220061482,0.504641701751257,0,0,0,0,1.85747171212792,0,0.354920400119532,0,0.241011029883482,0.220587945464788,0.653638332277218,0,0.539325232640658,0.196221465125346,0.38474715694639,0.738155454624648,1.40241773803446,0,0,1.26755034821831,0.982827216677626,0,0,0,0.343135620597051,0.219500570817251,0,0.502644862058154,0.0925884451585296,0,0,1.44331342025273,0.463721619900307,0.234817388471643,0.577465791044295,0,0.761016608938393,0,0,3.44703808522356,1.63802985597466,5.94524649154913,0,0,0,0,0.290633938513962,0,0,0.176096868026452,0,0,0,0.507983154337352,0.763976851116555,1.17217447210047,0,0.616964956219941,0.600686115687835,0.571652865261156,0,0,0,0.904902010304444,0,0.845302752556,0.26593811658487,0,0,0,0.266422179016099,0.142977993658148,1.08524321078289,0,0.325736184293735,0,0,1.50719688529793,0,0.599837947092342,26.7572317410619,5.52482800575339,12.6500363689819,0,0,0,0,0.410952645100767,0.179060963239896,0,0,0.215627574859517,0,0,0,0.773288812777695,0.502548796003046,0,0,0,0,0.49076596687656,1.00034104211935,1.89885516589815,0.831883446123229,0.535286966391485,0.946214490203608,0,0,0,0,0,0,0.260650843404249,0.195801157462741,0.686286847621712,0.206768026122887,1.2942852049117,0.320182673410333,1.21251028578504,0,1.20956117331872,0.744323423456331,0.61384789315225,0.841980283299221,0.256278298511402,0.511707249066704,0.482561763430822,1.48418066444991,0,0.532685175939381,0,0,0.697262270759755,0.120859449591622,0.40101294060657,0.368323955743585,0,0.182091168006717,0.786746489756545,0,0.15403067420883,0,1.46139224653261,0,1.13733384070897,0.170093705276516,0.215915916102139,0,0,2.50844886927427,0,0,0.223874754722178,0,0.522870902049801,1.02580050046556,0.984043937099117,0.325378394664303,0.412164046590889,0.27470839445503,0.082509499920588,0,0.650060246036521,0,0.193341436584244,0.154048617114644,0.15350367472613,0.137836572484531,0,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0.384380134730212,0,0,0,0.31481234683064,0,0.308033580176089,0.532306030317022,0.869932992075073,0.18532421910392,0.143124886741991,0.744316738719335,0,0.190630193923825,0.255897791311334,0.42793898803392,0,0,0.179872457583315,0.274537029736055,0.353437207037059,0.606547444719948,0,1.26377536871694,0,0.731140468893853,1.05650146756755,0.1364999114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| |||
|short_description=p@chr10:73587830..73587856,+ | |||
}} |
Revision as of 03:23, 11 January 2014
Short description: | p@chr10:73587830..73587856, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr10:73587830..73587856, + |
Coexpression cluster: | C143_Monocytederived_CD14_Macrophage_Dendritic_Basophils_CD14CD16_Osteoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 4.97e-54 | 59 |
monocyte | 4.97e-54 | 59 |
monoblast | 4.97e-54 | 59 |
promonocyte | 4.97e-54 | 59 |
defensive cell | 3.90e-52 | 48 |
phagocyte | 3.90e-52 | 48 |
macrophage dendritic cell progenitor | 8.99e-52 | 61 |
myeloid lineage restricted progenitor cell | 1.00e-46 | 66 |
granulocyte monocyte progenitor cell | 8.32e-46 | 67 |
myeloid leukocyte | 1.46e-43 | 72 |
classical monocyte | 6.62e-42 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.62e-42 | 42 |
myeloid cell | 3.05e-25 | 108 |
common myeloid progenitor | 3.05e-25 | 108 |
nongranular leukocyte | 9.92e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 3.45e-19 | 120 |
leukocyte | 4.01e-17 | 136 |
hematopoietic oligopotent progenitor cell | 2.60e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.60e-12 | 161 |
macrophage | 5.28e-12 | 6 |
hematopoietic stem cell | 6.16e-12 | 168 |
hematopoietic cell | 2.10e-11 | 177 |
connective tissue cell | 2.61e-07 | 361 |
intermediate monocyte | 7.16e-07 | 9 |
CD14-positive, CD16-positive monocyte | 7.16e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.26e-38 | 76 |
skeletal element | 8.57e-37 | 90 |
bone element | 1.89e-36 | 82 |
skeletal system | 1.97e-36 | 100 |
hematopoietic system | 2.35e-31 | 98 |
blood island | 2.35e-31 | 98 |
immune system | 2.15e-30 | 93 |
hemolymphoid system | 2.15e-28 | 108 |
musculoskeletal system | 1.11e-22 | 167 |
lateral plate mesoderm | 1.07e-18 | 203 |
mesoderm | 3.68e-14 | 315 |
mesoderm-derived structure | 3.68e-14 | 315 |
presumptive mesoderm | 3.68e-14 | 315 |
germ layer | 4.82e-07 | 560 |
germ layer / neural crest | 4.82e-07 | 560 |
embryonic tissue | 4.82e-07 | 560 |
presumptive structure | 4.82e-07 | 560 |
germ layer / neural crest derived structure | 4.82e-07 | 560 |
epiblast (generic) | 4.82e-07 | 560 |
embryonic structure | 7.98e-07 | 564 |
developing anatomical structure | 8.63e-07 | 581 |