FFCP PHASE1:Hg19::chr10:101690650..101690683,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23268 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30373 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=69bp_to_ENST00000543621,uc001kqh.2_5end | |||
|description=CAGE_peak_2_at_DNMBP_5end | |||
|id=chr10:101690650..101690683,- | |||
|ontology_enrichment_celltype=CL:0000066!1.91e-22!254;CL:0000223!7.26e-19!59;CL:0002076!1.44e-10!43;CL:0000181!3.26e-07!12;CL:0000417!3.26e-07!12;CL:0000668!3.26e-07!12;CL:0000414!3.26e-07!12;CL:0000412!3.26e-07!12;CL:0000182!3.26e-07!12;CL:1000507!3.95e-07!12;CL:1000494!3.95e-07!12;CL:1000497!5.98e-07!18;CL:0002518!5.98e-07!18;CL:0000082!6.57e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.36e-13;10!CL:1000494;1.36e-13;10!CL:0000182;1.94e-09;12!CL:1000497;6.40e-09;17!CL:0002518;6.40e-09;17!CL:1000449;1.99e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.18e-13,10;CL:1000494,1.18e-13,10;CL:0000223,2.23e-11,58;CL:0000066,1.02e-10,253;CL:0000182,1.83e-09,12;CL:1000497,5.93e-09,17;CL:0002518,5.93e-09,17;CL:1000449,1.82e-08,15 | |||
|ontology_enrichment_development_v019=UBERON:0001041;1.26e-16;30!UBERON:0009497;3.18e-13;13!UBERON:0006595;7.19e-12;86!UBERON:0004161;5.92e-10;11!UBERON:0003104;4.41e-09;31!CL:0000223;5.12e-07;58 | |||
|ontology_enrichment_disease=DOID:305!1.46e-25!106;DOID:0050687!1.79e-18!143;DOID:299!3.63e-13!25;DOID:1749!5.26e-09!14;DOID:7!4.78e-07!39;DOID:0050615!8.73e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:299;1.53e-12;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,8.27e-20,106;DOID:0050687,4.30e-15,143;DOID:299,1.68e-12,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.51e-31!169;UBERON:0000925!2.51e-31!169;UBERON:0006595!2.51e-31!169;UBERON:0001007!5.26e-28!155;UBERON:0001555!5.26e-28!155;UBERON:0007026!5.26e-28!155;UBERON:0004921!8.62e-26!129;UBERON:0004185!8.62e-26!129;UBERON:0000466!2.76e-23!126;UBERON:0005911!1.71e-22!82;UBERON:0000077!1.31e-21!130;UBERON:0005177!6.54e-20!107;UBERON:0000464!3.29e-16!104;UBERON:0001041!7.26e-16!98;UBERON:0009569!8.76e-15!113;UBERON:0003929!6.59e-13!54;UBERON:0005172!1.79e-12!55;UBERON:0005173!1.79e-12!55;UBERON:0003104!5.88e-12!238;UBERON:0009142!5.88e-12!238;UBERON:0000058!7.02e-12!26;UBERON:0009856!1.62e-11!26;UBERON:0001008!2.30e-11!45;UBERON:0009497!8.80e-11!25;UBERON:0000015!8.80e-11!25;UBERON:0002423!8.80e-11!25;UBERON:0006235!8.80e-11!25;UBERON:0004161!8.80e-11!25;UBERON:0006554!9.89e-11!44;UBERON:0007499!1.08e-10!25;UBERON:0002417!2.72e-10!61;UBERON:0000916!2.72e-10!61;UBERON:0000160!5.51e-10!27;UBERON:0005409!6.40e-10!35;UBERON:0000481!7.49e-10!347;UBERON:0001004!1.66e-09!72;UBERON:0002553!1.69e-09!70;UBERON:0002048!2.60e-09!22;UBERON:0000117!2.60e-09!22;UBERON:0000171!2.60e-09!22;UBERON:0000170!2.60e-09!22;UBERON:0005597!2.60e-09!22;UBERON:0000118!2.60e-09!22;UBERON:0003064!2.75e-09!37;UBERON:0009854!4.13e-09!23;UBERON:0001048!9.39e-09!168;UBERON:0000065!1.05e-08!53;UBERON:0005153!1.56e-08!37;UBERON:0008835!2.52e-08!22;UBERON:0003894!2.52e-08!22;UBERON:0003886!3.66e-08!63;UBERON:0002100!4.34e-08!216;UBERON:0000062!7.42e-08!511;UBERON:0005178!8.24e-08!34;UBERON:0002224!8.24e-08!34;UBERON:0002113!1.04e-07!27;UBERON:0003918!1.04e-07!27;UBERON:0005095!1.04e-07!27;UBERON:0007687!1.04e-07!27;UBERON:0000489!1.21e-07!32;UBERON:0002530!1.43e-07!59;UBERON:0004876!1.55e-07!20;UBERON:0000080!1.79e-07!18;UBERON:0002120!1.79e-07!18;UBERON:0004875!1.79e-07!18;UBERON:0005721!1.79e-07!18;UBERON:0005754!1.79e-07!18;UBERON:0007297!1.79e-07!18;UBERON:0005181!1.97e-07!35;UBERON:0005156!2.29e-07!59;UBERON:0000990!2.29e-07!59;UBERON:0009773!3.95e-07!12;UBERON:0001231!3.95e-07!12;UBERON:0004810!3.95e-07!12;UBERON:0000949!4.27e-07!45;UBERON:0005157!4.83e-07!51;UBERON:0004802!6.57e-07!19;UBERON:0000115!6.57e-07!19;UBERON:0002294!9.52e-07!7;UBERON:0001173!9.52e-07!7;UBERON:0004912!9.52e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.87e-17;22!UBERON:0002423;3.50e-16;25!UBERON:0000160;7.38e-15;17!UBERON:0004921;1.40e-14;33!UBERON:0004211;1.36e-13;10!UBERON:0009773;1.36e-13;10!UBERON:0001231;1.36e-13;10!UBERON:0004810;1.36e-13;10!UBERON:0000058;1.36e-12;10!UBERON:0005172;1.57e-10;52!UBERON:0005173;1.57e-10;52!UBERON:0002294;5.06e-10;7!UBERON:0001173;5.06e-10;7!UBERON:0000489;4.35e-09;29!UBERON:0005177;5.14e-09;99!UBERON:0001007;5.29e-09;81!UBERON:0006554;1.13e-08;30!UBERON:0001008;1.13e-08;30!UBERON:0000059;1.25e-08;11!UBERON:0002113;1.35e-08;24!UBERON:0011143;1.35e-08;24!UBERON:0006555;1.99e-08;15!UBERON:0004819;1.99e-08;15!UBERON:0001285;1.99e-08;15!UBERON:0007684;1.99e-08;15!UBERON:0002107;3.25e-08;19!UBERON:0006925;3.25e-08;19!UBERON:0002108;1.83e-07;4!UBERON:0002417;1.84e-07;58!UBERON:0000916;1.84e-07;58!UBERON:0002365;5.07e-07;31!UBERON:0002330;5.07e-07;31!UBERON:0006947;5.10e-07;3!UBERON:0004054;5.10e-07;3!UBERON:0004907;7.33e-07;5!UBERON:0002075;8.58e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,1.34e-26,118;UBERON:0001007,1.03e-25,145;UBERON:0001555,1.03e-25,145;UBERON:0007026,1.03e-25,145;UBERON:0005177,4.35e-24,101;UBERON:0004119,8.39e-23,160;UBERON:0000925,8.39e-23,160;UBERON:0006595,8.39e-23,160;UBERON:0005172,3.40e-18,54;UBERON:0005173,3.40e-18,54;UBERON:0005911,2.27e-16,82;UBERON:0009497,3.35e-16,25;UBERON:0000015,3.35e-16,25;UBERON:0002423,3.35e-16,25;UBERON:0006235,3.35e-16,25;UBERON:0004161,3.35e-16,25;UBERON:0009856,1.18e-15,26;UBERON:0002417,1.37e-15,60;UBERON:0000916,1.37e-15,60;UBERON:0005409,6.58e-15,25;UBERON:0000160,7.26e-15,17;UBERON:0009569,7.56e-15,112;UBERON:0007499,2.14e-14,25;UBERON:0004810,1.18e-13,10;UBERON:0009854,1.46e-13,23;UBERON:0001041,2.01e-13,87;UBERON:0003929,9.76e-13,54;UBERON:0008835,2.54e-12,22;UBERON:0003894,2.54e-12,22;UBERON:0002100,1.55e-11,199;UBERON:0000489,2.24e-11,31;UBERON:0001008,3.29e-11,48;UBERON:0002113,4.90e-11,26;UBERON:0003918,4.90e-11,26;UBERON:0011143,4.90e-11,26;UBERON:0005095,4.90e-11,26;UBERON:0007687,4.90e-11,26;UBERON:0006554,2.19e-10,47;UBERON:0006555,9.27e-10,16;UBERON:0004819,9.27e-10,16;UBERON:0000059,1.25e-08,11;UBERON:0004211,1.82e-08,15;UBERON:0009773,1.82e-08,15;UBERON:0001231,1.82e-08,15;UBERON:0001285,1.82e-08,15;UBERON:0007684,1.82e-08,15;UBERON:0004208,1.82e-08,15;UBERON:0002107,3.23e-08,19;UBERON:0006925,3.23e-08,19;UBERON:0008836,3.23e-08,19;UBERON:0011216,3.43e-08,223;UBERON:0003104,5.36e-08,160;UBERON:0009142,5.36e-08,160;UBERON:0001046,7.98e-08,19;UBERON:0002294,1.33e-07,9;UBERON:0001173,1.33e-07,9;UBERON:0004912,1.33e-07,9;UBERON:0002108,1.81e-07,4;UBERON:0002365,3.72e-07,31;UBERON:0002330,3.72e-07,31;UBERON:0000058,3.99e-07,19;UBERON:0006947,5.16e-07,3;UBERON:0004054,5.16e-07,3;UBERON:0000949,6.41e-07,45;UBERON:0004907,7.34e-07,5;UBERON:0002075,9.41e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0.655324116390517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29213382120997,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0.365921118388786,0.530119073285941,1.85910308591229,1.0366105501537,2.27088765788066,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.1536580090211,5.89696330006576,5.90789906681404,0,31.9769940212095,0,0,0,0.502644862058154,0.925884451585296,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.5013438638323,0.200506470303285,0.644566922551274,0,0,0,3.60959690325929,7.62451837333706,1.56869953835371,10.2297457257282,8.65523356921581,0,0,0.431831832204279,0,0,1.50506932156456,9.17554582962138,6.64860807142979,4.70136984916574,0,0,0,0,0,8.65544497840867,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0.267096106940212,0.826424576804891,0.384380134730212,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769776901804097,0,0,8.94366107379402,0.86101074534246,0,0.886860307073351,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.3225188996001,0,0,0,73.3071258760546,0,0,0,0,0,0,0,0,1.19548792950642,4.42054264849836,0,0,0,0,15.6370930996349,22.5566680091268,0,2.07151151837561,0,0,0.969332746095218,0,0,4.16684417736373,0.0874599999961957,0,3.98277068999249,5.84783395673362,11.3466087248609,0,0,0,0,0,0,0,0,0,0,0.697118721393016,1.46205491157214,0,1.61394733071642,2.78248697670294,18.5787005986634,0.31900115973192,0.641183153813036,0,0,0,0,0,0,0,0,0,0.421996129056054,11.2630637629812,17.6691339292426,0,19.9052386215701,26.9795571735184,37.2728388409512,0,0,0,0,0,0,0,2.34797542718508,0.242780379534093,25.253401782361,25.4080503702194,0,0,0,0,0,0,0,0,2.84609546029793,0,0.520679215005393,2.44980993535944,0.69647365264322,6.63961339319714,0,0,0,0,0.193978032976839,0,1.58186518546373,0,0,0,7.62650392665732,2.72539988855215,6.61704283691993,0,15.5617650526434,0,0,2.0167671718341,14.7860517322865,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,1.59743200399193,0,0,0,0,39.6086228393343,6.61778731380679,7.58225897106731,7.54919691166871,3.6418168160457,0,0,0,0.482259445395058,0.275078873194468,0,0.449947783103001,2.32140586367385,0.0607495566580247,0,7.80176502262062,15.8412856167694,0.105600336519406,0,0.575745591958336,0,0,0,0.542999601753713,0,0,0,0,0,0,5.56898487976713,1.32506888912221,0,0,8.7254287321008,7.04815022316672,3.41719720216623,11.6331185773753,2.89967338743037,0,0,0,5.10673006216145,0,0,0,0,8.95208348626335,0,0,0,0.573409195690071,0,0.0620964029413835,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0.219284049578707,0,0,3.20990637240838,0.256241518587947,0,0,0,0,0,0,0,0,28.315824530056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94443155503077,0,0.550285795565037,2.77261598760812,0,0,0,1.42899623863589,0,26.5714763819251,5.76194727859129,0.163771917510097,36.076885036959,0.135075169236789,0,0,0,0,1.09651553371436,0.992422356778588,0,1.02209942111676,0,0,0,0,1.1531308121143,0,0.171488009437418,0,0,2.00929529502746,0,4.55259938532981,0,27.4666720047513,10.0447459256045,0.215927591218621,3.34426181520935,0.142953088353313,0,0,0,0,0,0,0,4.73250094702305,0.118332000730565,0,24.5564489110739,3.2074961596167,0,0,5.59277158988962,5.20196238160788,11.2164490983688,0,0,0,4.37139893753226,0,0,0,0.67767649223376,0,0.301925687133347,42.6773094336934,25.571468578963,0,0,0.707029641304878,0,0,0,0,0,0,0,2.14264726326789,0.705789743431384,16.7704456380362,23.3707644238886,1.37618785021362,0,0,0,0,18.515939418039,0,0,0,0,0,0,0.509944148709909,0.801652215796681,0.0918948995348449,0,0.606229585745915,0.267964130156178,0,0,0.852935927603924,5.95161078659351,0.129177819672012,0.434523000071005,0.112131862580613,2.3549448562921,4.04234377916439,0.870866991587845,1.02669990325584,0.80822463617505,6.16810966377017,1.99596213927608,1.05824249194267,0,0,33.3251499815437,0,2.5670703278402,2.84827324821017,1.99727032255654,0,0 | |||
|short_description=p2@DNMBP | |||
}} |
Revision as of 04:30, 11 January 2014
Short description: | p2@DNMBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DNMBP_5end |
Coexpression cluster: | NA |
Association with transcript: | 69bp_to_ENST00000543621, uc001kqh.2_5end |
EntrezGene: | DNMBP |
HGNC: | 30373 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.18e-13 | 10 |
nephron tubule epithelial cell | 1.18e-13 | 10 |
endodermal cell | 2.23e-11 | 58 |
epithelial cell | 1.02e-10 | 253 |
hepatocyte | 1.83e-09 | 12 |
kidney cell | 5.93e-09 | 17 |
kidney epithelial cell | 5.93e-09 | 17 |
epithelial cell of nephron | 1.82e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.27e-20 | 106 |
cell type cancer | 4.30e-15 | 143 |
adenocarcinoma | 1.68e-12 | 25 |