FFCP PHASE1:Hg19::chr11:64851666..64851728,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7542 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12868 | |||
|TSSclassifier=strong | |||
|UniProt=O95159,E9PMQ3,E9PJX1,E9PQ47,E9PJ47 | |||
|association_with_transcript=0bp_to_ENST00000294258,ENST00000453524,ENST00000525509,ENST00000526289,ENST00000526334,ENST00000526440,ENST00000531761,ENST00000533216,NM_006782,uc001ocq.1,uc009yqa.2,uc010rnx.1_5end | |||
|coexpression_cluster_id=C1147 | |||
|description=CAGE_peak_1_at_ZFPL1_5end | |||
|id=chr11:64851666..64851728,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.29e-20!254;CL:0000220!5.43e-19!246;CL:0002321!1.56e-18!248;CL:0000055!1.23e-15!180;CL:0000548!8.23e-14!679;CL:0000004!8.23e-14!679;CL:0000255!8.23e-14!679;CL:0000012!2.71e-13!682;CL:0000222!5.47e-13!119;CL:0000183!2.34e-10!59;CL:0000192!2.62e-09!42;CL:0000514!2.62e-09!42;CL:0000187!1.29e-08!54;CL:0000680!3.90e-08!57;CL:0000056!3.90e-08!57;CL:0000355!3.90e-08!57;CL:0000144!4.60e-08!625;CL:0000076!4.83e-08!62;CL:0000057!5.53e-08!75;CL:0000359!7.99e-08!32 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.09e-07;32!CL:0000349;6.52e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.12e-20,253;CL:0002321,2.03e-18,250;CL:0000222,8.53e-13,121;CL:0000192,8.67e-09,43;CL:0000514,8.67e-09,43;CL:0000076,3.30e-08,63;CL:0000187,3.38e-08,55;CL:0000057,3.72e-08,76;CL:0000359,7.99e-08,32;CL:0000680,9.49e-08,58;CL:0000056,9.49e-08,58;CL:0000355,9.49e-08,58;CL:0000349,6.84e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!2.33e-13!216;UBERON:0000475!1.08e-12!365;UBERON:0005256!4.07e-12!143;UBERON:0003914!9.32e-11!118;UBERON:0002049!2.77e-10!79;UBERON:0007798!2.77e-10!79;UBERON:0000490!1.04e-09!138;UBERON:0003104!1.10e-09!238;UBERON:0009142!1.10e-09!238;UBERON:0000055!1.22e-09!69;UBERON:0001637!3.98e-09!42;UBERON:0003509!3.98e-09!42;UBERON:0004572!3.98e-09!42;UBERON:0000119!1.04e-08!312;UBERON:0001981!1.29e-08!60;UBERON:0007500!1.29e-08!60;UBERON:0004537!1.29e-08!60;UBERON:0006965!1.29e-08!60;UBERON:0000483!1.46e-08!309;UBERON:0004872!3.04e-08!84;UBERON:0009569!6.84e-08!113;UBERON:0000468!8.85e-08!659;UBERON:0000914!1.24e-07!83;UBERON:0002329!1.24e-07!83;UBERON:0003077!1.24e-07!83;UBERON:0003059!1.24e-07!83;UBERON:0007282!1.24e-07!83;UBERON:0009618!1.24e-07!83;UBERON:0007285!1.24e-07!83;UBERON:0000481!1.44e-07!347;UBERON:0000486!3.24e-07!82;UBERON:0004290!4.59e-07!70;UBERON:0003102!9.48e-07!95 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,4.88e-13,199;UBERON:0003914,4.51e-11,117;UBERON:0003104,5.19e-11,160;UBERON:0009142,5.19e-11,160;UBERON:0002049,4.22e-10,78;UBERON:0007798,4.22e-10,78;UBERON:0000490,6.37e-10,148;UBERON:0005256,6.79e-10,122;UBERON:0000055,1.86e-09,68;UBERON:0001637,3.98e-09,42;UBERON:0003509,3.98e-09,42;UBERON:0004572,3.98e-09,42;UBERON:0000119,4.55e-09,309;UBERON:0000483,6.40e-09,306;UBERON:0007503,9.59e-09,78;UBERON:0007500,1.95e-08,59;UBERON:0001981,1.95e-08,59;UBERON:0004537,1.95e-08,59;UBERON:0006965,1.95e-08,59;UBERON:0004872,4.50e-08,83;UBERON:0009569,9.66e-08,112;UBERON:0006554,1.15e-07,47;UBERON:0001008,2.23e-07,48;UBERON:0004111,2.70e-07,240;UBERON:0000486,6.24e-07,83;UBERON:0007524,7.91e-07,73;UBERON:0003102,9.28e-07,99;UBERON:0002329,9.31e-07,71;UBERON:0003059,9.31e-07,71;UBERON:0007282,9.31e-07,71;UBERON:0004290,9.31e-07,71;UBERON:0009618,9.31e-07,71 | |||
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| |||
|short_description=p1@ZFPL1 | |||
}} |
Revision as of 08:31, 11 January 2014
Short description: | p1@ZFPL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZFPL1_5end |
Coexpression cluster: | C1147_Mesenchymal_Renal_Alveolar_Fibroblast_Placental_Pericytes_Hepatic |
Association with transcript: | 0bp_to_ENST00000294258, ENST00000453524, ENST00000525509, ENST00000526289, ENST00000526334, ENST00000526440, ENST00000531761, ENST00000533216, NM_006782, uc001ocq.1, uc009yqa.2, uc010rnx.1_5end |
EntrezGene: | ZFPL1 |
HGNC: | 12868 |
UniProt: | O95159E9PMQ3E9PJX1E9PQ47E9PJ47 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.12e-20 | 253 |
embryonic cell | 2.03e-18 | 250 |
mesodermal cell | 8.53e-13 | 121 |
smooth muscle cell | 8.67e-09 | 43 |
smooth muscle myoblast | 8.67e-09 | 43 |
squamous epithelial cell | 3.30e-08 | 63 |
muscle cell | 3.38e-08 | 55 |
fibroblast | 3.72e-08 | 76 |
vascular associated smooth muscle cell | 7.99e-08 | 32 |
muscle precursor cell | 9.49e-08 | 58 |
myoblast | 9.49e-08 | 58 |
multi-potent skeletal muscle stem cell | 9.49e-08 | 58 |
extraembryonic cell | 6.84e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
trunk | 4.88e-13 | 199 |
epithelial tube | 4.51e-11 | 117 |
mesenchyme | 5.19e-11 | 160 |
entire embryonic mesenchyme | 5.19e-11 | 160 |
vasculature | 4.22e-10 | 78 |
vascular system | 4.22e-10 | 78 |
unilaminar epithelium | 6.37e-10 | 148 |
trunk mesenchyme | 6.79e-10 | 122 |
vessel | 1.86e-09 | 68 |
artery | 3.98e-09 | 42 |
arterial blood vessel | 3.98e-09 | 42 |
arterial system | 3.98e-09 | 42 |
cell layer | 4.55e-09 | 309 |
epithelium | 6.40e-09 | 306 |
epithelial vesicle | 9.59e-09 | 78 |
epithelial tube open at both ends | 1.95e-08 | 59 |
blood vessel | 1.95e-08 | 59 |
blood vasculature | 1.95e-08 | 59 |
vascular cord | 1.95e-08 | 59 |
splanchnic layer of lateral plate mesoderm | 4.50e-08 | 83 |
subdivision of trunk | 9.66e-08 | 112 |
urinary system structure | 1.15e-07 | 47 |
renal system | 2.23e-07 | 48 |
anatomical conduit | 2.70e-07 | 240 |
multilaminar epithelium | 6.24e-07 | 83 |
dense mesenchyme tissue | 7.91e-07 | 73 |
surface structure | 9.28e-07 | 99 |
somite | 9.31e-07 | 71 |
presomitic mesoderm | 9.31e-07 | 71 |
presumptive segmental plate | 9.31e-07 | 71 |
dermomyotome | 9.31e-07 | 71 |
trunk paraxial mesoderm | 9.31e-07 | 71 |