FFCP PHASE1:Hg19::chr12:98987458..98987473,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5250 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10989 | |||
|TSSclassifier=strong | |||
|UniProt=F8VWQ0,F8VWR4,F8VY00,F8VYH5 | |||
|association_with_transcript=0bp_to_ENST00000547534,ENST00000549338,ENST00000550695,ENST00000551123,ENST00000551265,uc001tft.2_5end | |||
|description=CAGE_peak_1_at_SLC25A3_5end | |||
|id=chr12:98987458..98987473,+ | |||
|ontology_enrichment_celltype=CL:0000012!1.46e-34!682;CL:0000548!1.10e-33!679;CL:0000004!1.10e-33!679;CL:0000255!1.10e-33!679;CL:0000144!1.97e-31!625;CL:0002371!5.66e-26!591;CL:0000055!2.28e-22!180;CL:0000220!3.34e-21!246;CL:0002321!3.70e-21!248;CL:0000222!3.84e-20!119;CL:0000003!3.37e-18!722;CL:0000183!3.61e-16!59;CL:0000187!3.23e-14!54;CL:0000680!1.04e-13!57;CL:0000056!1.04e-13!57;CL:0000355!1.04e-13!57;CL:0000393!1.36e-13!60;CL:0000211!1.36e-13!60;CL:0000192!5.03e-12!42;CL:0000514!5.03e-12!42;CL:0000063!9.00e-12!578;CL:0000066!9.99e-11!254;CL:0000057!2.96e-10!75;CL:0000359!4.55e-10!32;CL:0000071!2.52e-08!18;CL:0002546!2.52e-08!18;CL:0000115!5.45e-08!35;CL:0002139!9.17e-08!24;CL:0000213!1.23e-07!57;CL:0000215!1.23e-07!57;CL:0002078!2.28e-07!44;CL:0000034!4.68e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.90e-09;32!CL:0000192;1.07e-08;43!CL:0000071;2.50e-08;18!CL:0000187;3.11e-08;55!CL:0002139;9.07e-08;24!CL:0000393;1.50e-07;61!CL:0000211;1.50e-07;61!CL:0000115;2.80e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,9.22e-22,250;CL:0000222,8.92e-21,121;CL:0000187,2.26e-14,55;CL:0000680,7.24e-14,58;CL:0000056,7.24e-14,58;CL:0000355,7.24e-14,58;CL:0000393,9.36e-14,61;CL:0000211,9.36e-14,61;CL:0000192,3.59e-12,43;CL:0000514,3.59e-12,43;CL:0000066,1.39e-10,253;CL:0000057,3.33e-10,76;CL:0000359,4.55e-10,32;CL:0000115,2.02e-08,36;CL:0000071,2.52e-08,18;CL:0002546,2.52e-08,18;CL:0000213,5.26e-08,58;CL:0000215,5.26e-08,58;CL:0002139,9.17e-08,24;CL:0002078,9.22e-08,45;CL:0000034,7.53e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000514;1.07e-08;43!CL:0002546;2.50e-08;18!CL:0000355;1.45e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.66e-21!83;UBERON:0002329!5.66e-21!83;UBERON:0003077!5.66e-21!83;UBERON:0003059!5.66e-21!83;UBERON:0007282!5.66e-21!83;UBERON:0009618!5.66e-21!83;UBERON:0007285!5.66e-21!83;UBERON:0004290!4.58e-20!70;UBERON:0002049!1.86e-18!79;UBERON:0007798!1.86e-18!79;UBERON:0004872!6.34e-18!84;UBERON:0000486!1.24e-17!82;UBERON:0003914!1.78e-17!118;UBERON:0001134!7.74e-16!61;UBERON:0002036!7.74e-16!61;UBERON:0003082!7.74e-16!61;UBERON:0000490!1.99e-15!138;UBERON:0005256!2.07e-15!143;UBERON:0000055!2.49e-15!69;UBERON:0001009!3.38e-15!113;UBERON:0002385!3.48e-15!63;UBERON:0001015!3.48e-15!63;UBERON:0000383!3.48e-15!63;UBERON:0001981!4.65e-15!60;UBERON:0007500!4.65e-15!60;UBERON:0004537!4.65e-15!60;UBERON:0006965!4.65e-15!60;UBERON:0004535!6.93e-14!110;UBERON:0003104!7.71e-13!238;UBERON:0009142!7.71e-13!238;UBERON:0000926!7.36e-12!448;UBERON:0004120!7.36e-12!448;UBERON:0006603!7.36e-12!448;UBERON:0001637!9.28e-12!42;UBERON:0003509!9.28e-12!42;UBERON:0004572!9.28e-12!42;UBERON:0002100!5.62e-11!216;UBERON:0007100!1.46e-09!27;UBERON:0001986!2.52e-08!18;UBERON:0004638!2.52e-08!18;UBERON:0004852!2.52e-08!18;UBERON:0004573!3.30e-08!33;UBERON:0004571!3.30e-08!33;UBERON:0000948!5.56e-08!24;UBERON:0005498!5.56e-08!24;UBERON:0004140!5.56e-08!24;UBERON:0009881!5.56e-08!24;UBERON:0004141!5.56e-08!24;UBERON:0003084!5.56e-08!24;UBERON:0007005!5.56e-08!24;UBERON:0004139!5.56e-08!24;UBERON:0004291!5.56e-08!24;UBERON:0006914!3.46e-07!25;UBERON:0000487!4.58e-07!22;UBERON:0003102!7.78e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;3.77e-09;25!UBERON:0007500;6.02e-09;56!UBERON:0001981;6.02e-09;56!UBERON:0004537;6.02e-09;56!UBERON:0001637;2.01e-08;42!UBERON:0003509;2.01e-08;42!UBERON:0004572;2.01e-08;42!UBERON:0004638;2.50e-08;18!UBERON:0001986;2.50e-08;18!UBERON:0004852;2.50e-08;18!UBERON:0000490;5.35e-08;33!UBERON:0003914;6.67e-08;74!UBERON:0002049;1.01e-07;75!UBERON:0007798;1.01e-07;75!UBERON:0000948;1.46e-07;22!UBERON:0004573;1.75e-07;33!UBERON:0004571;1.75e-07;33!UBERON:0000055;3.28e-07;65!UBERON:0006914;3.42e-07;25!UBERON:0000487;4.52e-07;22 | |||
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| |||
|short_description=p1@SLC25A3 | |||
}} |
Revision as of 15:23, 11 January 2014
Short description: | p1@SLC25A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC25A3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000547534, ENST00000549338, ENST00000550695, ENST00000551123, ENST00000551265, uc001tft.2_5end |
EntrezGene: | SLC25A3 |
HGNC: | 10989 |
UniProt: | F8VWQ0F8VWR4F8VY00F8VYH5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 9.22e-22 | 250 |
mesodermal cell | 8.92e-21 | 121 |
muscle cell | 2.26e-14 | 55 |
muscle precursor cell | 7.24e-14 | 58 |
myoblast | 7.24e-14 | 58 |
multi-potent skeletal muscle stem cell | 7.24e-14 | 58 |
electrically responsive cell | 9.36e-14 | 61 |
electrically active cell | 9.36e-14 | 61 |
smooth muscle cell | 3.59e-12 | 43 |
smooth muscle myoblast | 3.59e-12 | 43 |
epithelial cell | 1.39e-10 | 253 |
fibroblast | 3.33e-10 | 76 |
vascular associated smooth muscle cell | 4.55e-10 | 32 |
endothelial cell | 2.02e-08 | 36 |
blood vessel endothelial cell | 2.52e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.52e-08 | 18 |
lining cell | 5.26e-08 | 58 |
barrier cell | 5.26e-08 | 58 |
endothelial cell of vascular tree | 9.17e-08 | 24 |
meso-epithelial cell | 9.22e-08 | 45 |
stem cell | 7.53e-07 | 441 |