FFCP PHASE1:Hg19::chr13:20532850..20532890,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7750 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12989 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UBW7 | |||
|association_with_transcript=2bp_to_ENST00000382874,NM_001190964_5end | |||
|description=CAGE_peak_1_at_ZMYM2_5end | |||
|id=chr13:20532850..20532890,+ | |||
|ontology_enrichment_celltype=CL:0000037!9.92e-21!172;CL:0000566!9.92e-21!172;CL:0000738!6.68e-19!140;CL:0002032!4.45e-18!165;CL:0000837!4.45e-18!165;CL:0000988!1.11e-17!182;CL:0002031!5.43e-13!124;CL:0000763!4.11e-12!112;CL:0000049!4.11e-12!112;CL:0002087!7.38e-12!119;CL:0000766!2.79e-09!76;CL:0002057!3.33e-08!42;CL:0000557!1.39e-07!71;CL:0000839!6.97e-07!70 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.76e-22,168;CL:0000738,8.96e-21,136;CL:0000988,7.94e-20,177;CL:0002032,1.01e-19,161;CL:0000837,1.01e-19,161;CL:0002031,1.44e-14,120;CL:0000763,1.02e-13,108;CL:0000049,1.02e-13,108;CL:0002087,2.21e-13,115;CL:0000766,5.40e-11,72;CL:0000557,3.90e-09,67;CL:0000839,2.40e-08,66;CL:0000860,3.33e-08,42;CL:0002057,3.33e-08,42;CL:0002009,1.80e-07,61;CL:0002194,6.30e-07,59;CL:0000576,6.30e-07,59;CL:0000040,6.30e-07,59;CL:0000559,6.30e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.41e-19!115;UBERON:0001049!1.02e-17!57;UBERON:0005068!1.02e-17!57;UBERON:0006241!1.02e-17!57;UBERON:0007135!1.02e-17!57;UBERON:0000073!1.81e-17!94;UBERON:0001016!1.81e-17!94;UBERON:0001017!5.36e-17!82;UBERON:0005743!6.61e-17!86;UBERON:0002780!1.24e-16!41;UBERON:0001890!1.24e-16!41;UBERON:0006240!1.24e-16!41;UBERON:0003080!3.09e-16!42;UBERON:0002616!5.99e-15!59;UBERON:0001869!8.23e-14!32;UBERON:0002020!1.37e-13!34;UBERON:0003528!1.37e-13!34;UBERON:0001893!1.44e-13!34;UBERON:0000955!2.69e-13!69;UBERON:0006238!2.69e-13!69;UBERON:0002791!3.80e-13!33;UBERON:0002346!1.20e-12!90;UBERON:0003075!4.75e-12!86;UBERON:0007284!4.75e-12!86;UBERON:0000956!4.31e-11!25;UBERON:0000203!4.31e-11!25;UBERON:0003056!8.01e-11!61;UBERON:0002619!1.31e-10!22;UBERON:0001950!6.83e-10!20;UBERON:0002390!4.40e-09!102;UBERON:0003061!4.40e-09!102;UBERON:0002193!7.57e-08!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.16e-12;32!UBERON:0002791;3.36e-12;32!UBERON:0002780;3.78e-12;41!UBERON:0001890;3.78e-12;41!UBERON:0003528;3.83e-12;34!UBERON:0002020;3.83e-12;34!UBERON:0001893;5.72e-12;34!UBERON:0000956;4.23e-11;25!UBERON:0000203;4.23e-11;25!UBERON:0002619;1.24e-10;22!UBERON:0000073;2.35e-10;53!UBERON:0002616;2.35e-10;53!UBERON:0001950;6.67e-10;20!UBERON:0001017;5.38e-07;75!UBERON:0001016;6.36e-07;83!UBERON:0000955;6.61e-07;68!UBERON:0000922;8.12e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.39e-19,114;UBERON:0001049,4.83e-18,56;UBERON:0005068,4.83e-18,56;UBERON:0006241,4.83e-18,56;UBERON:0007135,4.83e-18,56;UBERON:0001016,9.96e-18,89;UBERON:0000073,2.75e-17,53;UBERON:0002616,2.75e-17,53;UBERON:0001017,3.26e-17,81;UBERON:0002780,1.24e-16,41;UBERON:0001890,1.24e-16,41;UBERON:0003080,1.24e-16,41;UBERON:0006240,1.24e-16,41;UBERON:0001869,8.23e-14,32;UBERON:0003528,1.37e-13,34;UBERON:0002020,1.37e-13,34;UBERON:0001893,1.44e-13,34;UBERON:0000955,1.69e-13,68;UBERON:0006238,1.69e-13,68;UBERON:0002791,3.35e-13,32;UBERON:0002346,2.98e-12,86;UBERON:0003075,1.17e-11,82;UBERON:0007284,1.17e-11,82;UBERON:0000956,4.31e-11,25;UBERON:0000203,4.31e-11,25;UBERON:0003056,5.92e-11,61;UBERON:0002619,1.31e-10,22;UBERON:0002390,1.75e-10,98;UBERON:0003061,1.75e-10,98;UBERON:0001950,6.83e-10,20;UBERON:0002193,4.83e-09,108 | |||
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| |||
|short_description=p1@ZMYM2 | |||
}} |
Revision as of 16:52, 11 January 2014
Short description: | p1@ZMYM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZMYM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 2bp_to_ENST00000382874, NM_001190964_5end |
EntrezGene: | ZMYM2 |
HGNC: | 12989 |
UniProt: | Q9UBW7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.76e-22 | 168 |
leukocyte | 8.96e-21 | 136 |
hematopoietic cell | 7.94e-20 | 177 |
hematopoietic oligopotent progenitor cell | 1.01e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.01e-19 | 161 |
hematopoietic lineage restricted progenitor cell | 1.44e-14 | 120 |
myeloid cell | 1.02e-13 | 108 |
common myeloid progenitor | 1.02e-13 | 108 |
nongranular leukocyte | 2.21e-13 | 115 |
myeloid leukocyte | 5.40e-11 | 72 |
granulocyte monocyte progenitor cell | 3.90e-09 | 67 |
myeloid lineage restricted progenitor cell | 2.40e-08 | 66 |
classical monocyte | 3.33e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.33e-08 | 42 |
macrophage dendritic cell progenitor | 1.80e-07 | 61 |
monopoietic cell | 6.30e-07 | 59 |
monocyte | 6.30e-07 | 59 |
monoblast | 6.30e-07 | 59 |
promonocyte | 6.30e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.39e-19 | 114 |
neural tube | 4.83e-18 | 56 |
neural rod | 4.83e-18 | 56 |
future spinal cord | 4.83e-18 | 56 |
neural keel | 4.83e-18 | 56 |
nervous system | 9.96e-18 | 89 |
regional part of nervous system | 2.75e-17 | 53 |
regional part of brain | 2.75e-17 | 53 |
central nervous system | 3.26e-17 | 81 |
regional part of forebrain | 1.24e-16 | 41 |
forebrain | 1.24e-16 | 41 |
anterior neural tube | 1.24e-16 | 41 |
future forebrain | 1.24e-16 | 41 |
cerebral hemisphere | 8.23e-14 | 32 |
brain grey matter | 1.37e-13 | 34 |
gray matter | 1.37e-13 | 34 |
telencephalon | 1.44e-13 | 34 |
brain | 1.69e-13 | 68 |
future brain | 1.69e-13 | 68 |
regional part of telencephalon | 3.35e-13 | 32 |
neurectoderm | 2.98e-12 | 86 |
neural plate | 1.17e-11 | 82 |
presumptive neural plate | 1.17e-11 | 82 |
cerebral cortex | 4.31e-11 | 25 |
pallium | 4.31e-11 | 25 |
pre-chordal neural plate | 5.92e-11 | 61 |
regional part of cerebral cortex | 1.31e-10 | 22 |
hematopoietic system | 1.75e-10 | 98 |
blood island | 1.75e-10 | 98 |
neocortex | 6.83e-10 | 20 |
hemolymphoid system | 4.83e-09 | 108 |