FFCP PHASE1:Hg19::chr13:77524004..77524015,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C174 | |||
|description=CAGE_peak_at_chr13:77524004..77524015,+ | |||
|id=chr13:77524004..77524015,+ | |||
|ontology_enrichment_celltype=CL:0002057!9.81e-72!42;CL:0000860!9.15e-67!45;CL:0002194!4.29e-46!63;CL:0000576!4.29e-46!63;CL:0000040!4.29e-46!63;CL:0000559!4.29e-46!63;CL:0002009!1.31e-44!65;CL:0000839!2.92e-41!70;CL:0000557!1.20e-40!71;CL:0000766!8.11e-38!76;CL:0000763!8.17e-25!112;CL:0000049!8.17e-25!112;CL:0002087!3.45e-23!119;CL:0002031!3.87e-22!124;CL:0000738!2.82e-19!140;CL:0002032!6.65e-16!165;CL:0000837!6.65e-16!165;CL:0000037!3.92e-15!172;CL:0000566!3.92e-15!172;CL:0000988!3.92e-14!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.57e-53;33!CL:0002057;2.57e-53;33!CL:0000473;1.96e-38;39!CL:0000234;1.96e-38;39!CL:0000576;8.07e-27;48!CL:0000766;4.33e-15;69!CL:0000763;8.18e-10;100!CL:0002087;3.91e-09;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.32e-46,42;CL:0002057,1.32e-46,42;CL:0000473,1.04e-40,48;CL:0000234,1.04e-40,48;CL:0002194,1.92e-32,59;CL:0000576,1.92e-32,59;CL:0000040,1.92e-32,59;CL:0000559,1.92e-32,59;CL:0002009,2.25e-31,61;CL:0000839,5.53e-29,66;CL:0000557,1.51e-28,67;CL:0000766,1.52e-26,72;CL:0000763,1.58e-17,108;CL:0000049,1.58e-17,108;CL:0002087,2.02e-16,115;CL:0002031,1.04e-15,120;CL:0000738,8.94e-14,136;CL:0002032,1.64e-11,161;CL:0000837,1.64e-11,161;CL:0000037,5.38e-11,168;CL:0000988,2.16e-10,177 | |||
|ontology_enrichment_development_v019=CL:0002057;3.59e-32;42!UBERON:0005425;1.12e-17;1!UBERON:0003056;9.37e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.36e-36!80;UBERON:0001474!3.95e-33!86;UBERON:0004765!8.11e-28!101;UBERON:0001434!8.11e-28!101;UBERON:0002390!1.62e-27!102;UBERON:0003061!1.62e-27!102;UBERON:0002193!8.17e-25!112;UBERON:0002405!4.29e-24!115;UBERON:0002204!1.12e-15!167;UBERON:0003081!2.03e-11!216;UBERON:0000941!3.10e-10!1;UBERON:0004904!3.10e-10!1;UBERON:0002464!3.10e-10!1;UBERON:0001021!3.10e-10!1;UBERON:0001785!3.10e-10!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.12e-17;1!UBERON:0001785;1.12e-17;1!UBERON:0002464;1.12e-17;1!UBERON:0004904;1.12e-17;1!UBERON:0001021;1.12e-17;1!UBERON:0003714;1.64e-09;2!UBERON:0005162;1.64e-09;2!UBERON:0000122;1.64e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.96e-25,76;UBERON:0001474,2.92e-23,82;UBERON:0004765,3.77e-21,90;UBERON:0002405,1.89e-20,93;UBERON:0002390,2.23e-19,98;UBERON:0003061,2.23e-19,98;UBERON:0001434,5.58e-19,100;UBERON:0000941,8.72e-18,1;UBERON:0001785,8.72e-18,1;UBERON:0002464,8.72e-18,1;UBERON:0004904,8.72e-18,1;UBERON:0001021,8.72e-18,1;UBERON:0003902,8.72e-18,1;UBERON:0005425,8.72e-18,1;UBERON:0002193,1.58e-17,108;UBERON:0002204,4.56e-11,167;UBERON:0003714,1.44e-09,2;UBERON:0005162,1.44e-09,2;UBERON:0000122,1.44e-09,2;UBERON:0003081,6.06e-09,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619412741790207,5.75384784644301,2.56160706529101,0.47296445977717,1.03423704220986,0,0,0.188242339542605,0,0.224723484445085,1.22433556948361,0.320929027076094,0,0,0.199463657621632,0,15.6712988859435,3.40431134814684,3.11411124497787,1.00499466102697,1.0429658368404,0.434377689410233,8.47559303686716,0.736555271975129,1.89877432464531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:77524004..77524015,+ | |||
}} |
Revision as of 18:07, 11 January 2014
Short description: | p@chr13:77524004..77524015, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr13:77524004..77524015, + |
Coexpression cluster: | C174_CD14_Neutrophils_Smooth_mesothelioma_embryonic_Monocytederived_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.32e-46 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.32e-46 | 42 |
defensive cell | 1.04e-40 | 48 |
phagocyte | 1.04e-40 | 48 |
monopoietic cell | 1.92e-32 | 59 |
monocyte | 1.92e-32 | 59 |
monoblast | 1.92e-32 | 59 |
promonocyte | 1.92e-32 | 59 |
macrophage dendritic cell progenitor | 2.25e-31 | 61 |
myeloid lineage restricted progenitor cell | 5.53e-29 | 66 |
granulocyte monocyte progenitor cell | 1.51e-28 | 67 |
myeloid leukocyte | 1.52e-26 | 72 |
myeloid cell | 1.58e-17 | 108 |
common myeloid progenitor | 1.58e-17 | 108 |
nongranular leukocyte | 2.02e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 1.04e-15 | 120 |
leukocyte | 8.94e-14 | 136 |
hematopoietic oligopotent progenitor cell | 1.64e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.64e-11 | 161 |
hematopoietic stem cell | 5.38e-11 | 168 |
hematopoietic cell | 2.16e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.96e-25 | 76 |
bone element | 2.92e-23 | 82 |
skeletal element | 3.77e-21 | 90 |
immune system | 1.89e-20 | 93 |
hematopoietic system | 2.23e-19 | 98 |
blood island | 2.23e-19 | 98 |
skeletal system | 5.58e-19 | 100 |
cranial nerve II | 8.72e-18 | 1 |
cranial nerve | 8.72e-18 | 1 |
nerve trunk | 8.72e-18 | 1 |
nerve connecting eye with brain | 8.72e-18 | 1 |
nerve | 8.72e-18 | 1 |
retinal neural layer | 8.72e-18 | 1 |
presumptive neural retina | 8.72e-18 | 1 |
hemolymphoid system | 1.58e-17 | 108 |
musculoskeletal system | 4.56e-11 | 167 |
neural tissue | 1.44e-09 | 2 |
multi cell component structure | 1.44e-09 | 2 |
neuron projection bundle | 1.44e-09 | 2 |
lateral plate mesoderm | 6.06e-09 | 203 |