FFCP PHASE1:Hg19::chr13:80615454..80615478,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr13:80615454..80615478,+ | |||
|id=chr13:80615454..80615478,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.21e-60!42;CL:0000860!1.71e-56!45;CL:0002194!3.12e-39!63;CL:0000576!3.12e-39!63;CL:0000040!3.12e-39!63;CL:0000559!3.12e-39!63;CL:0002009!5.42e-38!65;CL:0000839!3.39e-35!70;CL:0000557!1.10e-34!71;CL:0000766!2.55e-32!76;CL:0000763!1.88e-21!112;CL:0000049!1.88e-21!112;CL:0002087!4.30e-20!119;CL:0002031!3.25e-19!124;CL:0000738!8.05e-17!140;CL:0002032!5.36e-14!165;CL:0000837!5.36e-14!165;CL:0000037!2.37e-13!172;CL:0000566!2.37e-13!172;CL:0000988!1.63e-12!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.51e-29;33!CL:0002057;5.51e-29;33!CL:0000473;1.98e-23;39!CL:0000234;1.98e-23;39!CL:0000576;3.08e-11;48!CL:0000766;8.04e-11;69!CL:0000763;8.30e-08;100!CL:0002087;2.46e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.83e-24,42;CL:0002057,1.83e-24,42;CL:0000473,1.87e-21,48;CL:0000234,1.87e-21,48;CL:0002194,3.11e-17,59;CL:0000576,3.11e-17,59;CL:0000040,3.11e-17,59;CL:0000559,3.11e-17,59;CL:0002009,1.09e-16,61;CL:0000839,1.82e-15,66;CL:0000557,3.04e-15,67;CL:0000766,3.22e-14,72;CL:0000763,1.35e-09,108;CL:0000049,1.35e-09,108;CL:0002087,5.00e-09,115;CL:0002031,1.16e-08,120;CL:0000738,1.15e-07,136 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.16e-29;1!CL:0002057;2.50e-15;42!UBERON:0003056;1.09e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.23e-30!80;UBERON:0001474!2.11e-28!86;UBERON:0004765!5.81e-24!101;UBERON:0001434!5.81e-24!101;UBERON:0002390!1.03e-23!102;UBERON:0003061!1.03e-23!102;UBERON:0002193!1.88e-21!112;UBERON:0002405!7.53e-21!115;UBERON:0002204!8.30e-14!167;UBERON:0000941!2.95e-13!1;UBERON:0004904!2.95e-13!1;UBERON:0002464!2.95e-13!1;UBERON:0001021!2.95e-13!1;UBERON:0001785!2.95e-13!1;UBERON:0003081!3.08e-10!216;UBERON:0003714!2.91e-07!2;UBERON:0005162!2.91e-07!2;UBERON:0000122!2.91e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;3.16e-29;1!UBERON:0001785;3.16e-29;1!UBERON:0002464;3.16e-29;1!UBERON:0004904;3.16e-29;1!UBERON:0001021;3.16e-29;1!UBERON:0003714;2.37e-15;2!UBERON:0005162;2.37e-15;2!UBERON:0000122;2.37e-15;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.16e-29,1;UBERON:0001785,3.16e-29,1;UBERON:0002464,3.16e-29,1;UBERON:0004904,3.16e-29,1;UBERON:0001021,3.16e-29,1;UBERON:0003902,3.16e-29,1;UBERON:0005425,3.16e-29,1;UBERON:0003714,2.37e-15,2;UBERON:0005162,2.37e-15,2;UBERON:0000122,2.37e-15,2;UBERON:0002371,1.71e-13,76;UBERON:0001474,1.55e-12,82;UBERON:0004765,1.86e-11,90;UBERON:0002405,4.26e-11,93;UBERON:0002390,1.51e-10,98;UBERON:0003061,1.51e-10,98;UBERON:0001434,2.42e-10,100;UBERON:0002193,1.35e-09,108;UBERON:0001781,2.43e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0.28769239232215,0,0,6.89491361473237,1.93645405075148,1.35426486594342,0,0,0.224723484445085,8.26426509401437,2.88836124368484,5.11469700639233,0,0,0,0.580418477257168,0,0.622822248995575,0,0,0.868755378820466,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:80615454..80615478,+ | |||
}} |
Revision as of 18:11, 11 January 2014
Short description: | p@chr13:80615454..80615478, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:80615454..80615478, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.83e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.83e-24 | 42 |
defensive cell | 1.87e-21 | 48 |
phagocyte | 1.87e-21 | 48 |
monopoietic cell | 3.11e-17 | 59 |
monocyte | 3.11e-17 | 59 |
monoblast | 3.11e-17 | 59 |
promonocyte | 3.11e-17 | 59 |
macrophage dendritic cell progenitor | 1.09e-16 | 61 |
myeloid lineage restricted progenitor cell | 1.82e-15 | 66 |
granulocyte monocyte progenitor cell | 3.04e-15 | 67 |
myeloid leukocyte | 3.22e-14 | 72 |
myeloid cell | 1.35e-09 | 108 |
common myeloid progenitor | 1.35e-09 | 108 |
nongranular leukocyte | 5.00e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 1.16e-08 | 120 |
leukocyte | 1.15e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.16e-29 | 1 |
cranial nerve | 3.16e-29 | 1 |
nerve trunk | 3.16e-29 | 1 |
nerve connecting eye with brain | 3.16e-29 | 1 |
nerve | 3.16e-29 | 1 |
retinal neural layer | 3.16e-29 | 1 |
presumptive neural retina | 3.16e-29 | 1 |
neural tissue | 2.37e-15 | 2 |
multi cell component structure | 2.37e-15 | 2 |
neuron projection bundle | 2.37e-15 | 2 |
bone marrow | 1.71e-13 | 76 |
bone element | 1.55e-12 | 82 |
skeletal element | 1.86e-11 | 90 |
immune system | 4.26e-11 | 93 |
hematopoietic system | 1.51e-10 | 98 |
blood island | 1.51e-10 | 98 |
skeletal system | 2.42e-10 | 100 |
hemolymphoid system | 1.35e-09 | 108 |
layer of retina | 2.43e-08 | 4 |