FFCP PHASE1:Hg19::chr15:51852698..51852702,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:51852698..51852702,- | |||
|id=chr15:51852698..51852702,- | |||
|ontology_enrichment_celltype=CL:0002194!8.81e-22!63;CL:0000576!8.81e-22!63;CL:0000040!8.81e-22!63;CL:0000559!8.81e-22!63;CL:0002009!1.31e-20!65;CL:0000766!6.88e-20!76;CL:0000839!5.43e-18!70;CL:0000557!1.62e-17!71;CL:0000860!7.83e-14!45;CL:0002057!1.64e-13!42;CL:0000763!6.23e-13!112;CL:0000049!6.23e-13!112;CL:0002087!1.85e-12!119;CL:0000738!6.98e-12!140;CL:0000037!1.13e-09!172;CL:0000566!1.13e-09!172;CL:0002031!3.52e-09!124;CL:0000988!1.24e-08!182;CL:0002032!1.58e-08!165;CL:0000837!1.58e-08!165 | |||
|ontology_enrichment_celltype_v019=CL:0002619;1.30e-22;3!CL:0000576;2.54e-15;48!CL:0000766;7.91e-14;69!CL:0000473;1.20e-13;39!CL:0000234;1.20e-13;39!CL:0000235;2.18e-11;6!CL:0000860;1.00e-09;33!CL:0002057;1.00e-09;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.48e-28,72;CL:0002194,2.06e-27,59;CL:0000576,2.06e-27,59;CL:0000040,2.06e-27,59;CL:0000559,2.06e-27,59;CL:0002009,1.98e-26,61;CL:0000839,3.13e-24,66;CL:0000557,7.89e-24,67;CL:0002619,7.02e-23,3;CL:0000473,4.21e-19,48;CL:0000234,4.21e-19,48;CL:0000763,7.68e-18,108;CL:0000049,7.68e-18,108;CL:0000738,3.85e-17,136;CL:0002087,1.63e-16,115;CL:0002031,8.74e-14,120;CL:0000037,3.56e-13,168;CL:0000860,2.34e-12,42;CL:0002057,2.34e-12,42;CL:0002032,2.53e-12,161;CL:0000837,2.53e-12,161;CL:0000988,2.57e-12,177;CL:0000235,3.53e-11,6 | |||
|ontology_enrichment_development_v019=CL:0002057;3.17e-10;42!UBERON:0005425;2.05e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.89e-14!80;UBERON:0002390!1.72e-13!102;UBERON:0003061!1.72e-13!102;UBERON:0001474!4.63e-13!86;UBERON:0002193!1.63e-11!112;UBERON:0002020!4.47e-11!34;UBERON:0003528!4.47e-11!34;UBERON:0001893!1.19e-10!34;UBERON:0002791!3.84e-10!33;UBERON:0001869!5.87e-10!32;UBERON:0002616!9.64e-10!59;UBERON:0002619!1.41e-09!22;UBERON:0001950!1.42e-09!20;UBERON:0004765!1.44e-09!101;UBERON:0001434!1.44e-09!101;UBERON:0007023!3.60e-09!115;UBERON:0002405!4.27e-09!115;UBERON:0000955!5.11e-09!69;UBERON:0006238!5.11e-09!69;UBERON:0001049!7.66e-09!57;UBERON:0005068!7.66e-09!57;UBERON:0006241!7.66e-09!57;UBERON:0007135!7.66e-09!57;UBERON:0002780!1.68e-08!41;UBERON:0001890!1.68e-08!41;UBERON:0006240!1.68e-08!41;UBERON:0001017!2.62e-08!82;UBERON:0003080!3.99e-08!42;UBERON:0000073!4.44e-08!94;UBERON:0001016!4.44e-08!94;UBERON:0005743!7.42e-08!86;UBERON:0000956!7.76e-08!25;UBERON:0000203!7.76e-08!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;2.05e-08;1!UBERON:0000941;2.05e-08;1!UBERON:0001785;2.05e-08;1!UBERON:0002464;2.05e-08;1!UBERON:0004904;2.05e-08;1!UBERON:0001021;2.05e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.09e-20,76;UBERON:0002390,5.57e-20,98;UBERON:0003061,5.57e-20,98;UBERON:0001474,5.70e-19,82;UBERON:0002193,7.86e-18,108;UBERON:0004765,4.93e-17,90;UBERON:0002405,2.16e-16,93;UBERON:0001434,4.82e-15,100;UBERON:0007029,1.59e-08,1;UBERON:0000941,1.84e-08,1;UBERON:0001785,1.84e-08,1;UBERON:0002464,1.84e-08,1;UBERON:0004904,1.84e-08,1;UBERON:0001021,1.84e-08,1;UBERON:0003902,1.84e-08,1;UBERON:0005425,1.84e-08,1;UBERON:0003081,6.40e-08,203;UBERON:0002204,7.91e-08,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0.383829398097213,0.309632246632152,0,0,0,0,0,0,4.9859586767869,0.802177789880567,5.20826089718044,2.23915474239924,1.6194683300949,2.31818010870768,0.145398238779565,0,0.242584061187816,1.16214518452842,2.05583944010913,0,1.1507695692886,0.256160706529101,0,1.03423704220986,0,0,0.752969358170419,0.545812300115692,0.449446968890169,1.53041946185451,0,0,0,0.199463657621632,0,0.580418477257168,0,1.24564449799115,0.502497330513487,0,0.434377689410233,0.605399502633369,0.736555271975129,0.949387162322653,0,0,0.209658645508376,1.23561494261145,0.901061357049038,0.16072558669708,0,0.79566670879636,0.91332076882317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0.189069634328136,0,0,0.0654895377488563,0,0,0.649094787309367,0.348259474598534,0.398873881556595,1.43094374583205,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0.61246251376468,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23108503043699,0.936017060556951,1.0404181360211,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0,0,0,0.513372145118994,0,0,0,0.335032530668698,0.637938751653163,2.99602809578873,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,1.72571360654893,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.470719003883896,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0,0,1.58625035258854,0.106824071127473,0,0,0.371606350251437,0,0.142283686696828,0,0,0,0,0,0.561594356226918,0,0,0,0,0.1605880751037,0.201799707191048,0,0.343505344755765,0.307240764308458,0.223676107892416,0,0.19538809540204,0,0,0,0,0,0,0,0.121360521749513,0.222886768554957,0,0,0,0,0,0.422008249231538,0.111308705022906,0,0.63337622438398,0,0.552567831062295,0.503865495708552,0,0.123084805461069,0,0.0898683511473268,0.179021174675609,0.511572370226872,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0.227586896570999,0,0,1.37897349296586,0.291604613383254,0.173624994933292,0,0.60298219312704,0,0.884634079449797,0.591095237907095,0,0,0,0.0769502585037971,0.113942055847001,0,0.0897576444097721,0.108647371922008,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0.163232808159148,0,0.216388639742091,1.99052386215701,0.176915129006678,0,0.593042257361244,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0.394584402849391,0,0.30607276163049,0.126373159256976,0,0,0.664653872707185,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0.0967563312890851,0.219267951258557,0,0,0,0.225980740780532,0,0,0.253243183823515,0.195551382734803,0.160317640503067,0,0.19980960958213,0,0,0,0,0.124252535565433,0.235694034616795,0.135904206073614,0,0,0.288950589901519,0,0.410716136675979,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0.446342914883745,0,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0,0.0846733320657845,0,0.408610218334727,0.160753148465019,0,0,0,0,0.121499113316049,0,0.0788057072991982,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0,0,0.387848869084652,0.26446520348538,0.171086837884329,0,0.106787412567695,0,0,0,0,0.243585196761792,0,0,0,0,0,0.157054096250234,0.886068179966986,0.244052529803926,0.250381861413,0,0.554645257684261,0.0620964029413835,0,0.124980407962107,0.151649117541648,0,0,0,0,0.298509605773748,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0.127894371303652,0,0,0,0,0.637724760305049,0.495743057036009,0,0,0.23658523500376,0,0,0,0.321146125482298,0,0.638535436228605,0.41023272848151,1.76450187355203,0.0691572524642179,0.161475645631851,1.42769420259154,0.294443155503077,0,0,0,0,0,0,0,0,0,0.523813388962845,0,0.147856086217045,0.202612753855184,0,1.03343398250592,0.19024743058172,0.546974809018219,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0.171488009437418,0.203909198930495,0.328863867814245,0.118193840883968,0,0,0.785577949580009,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0.223710863595585,0,0,0,0,0,1.45713297917742,0,0,0.1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| |||
|short_description=p@chr15:51852698..51852702,- | |||
}} |
Revision as of 23:32, 11 January 2014
Short description: | p@chr15:51852698..51852702, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr15:51852698..51852702, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.48e-28 | 72 |
monopoietic cell | 2.06e-27 | 59 |
monocyte | 2.06e-27 | 59 |
monoblast | 2.06e-27 | 59 |
promonocyte | 2.06e-27 | 59 |
macrophage dendritic cell progenitor | 1.98e-26 | 61 |
myeloid lineage restricted progenitor cell | 3.13e-24 | 66 |
granulocyte monocyte progenitor cell | 7.89e-24 | 67 |
adult endothelial progenitor cell | 7.02e-23 | 3 |
defensive cell | 4.21e-19 | 48 |
phagocyte | 4.21e-19 | 48 |
myeloid cell | 7.68e-18 | 108 |
common myeloid progenitor | 7.68e-18 | 108 |
leukocyte | 3.85e-17 | 136 |
nongranular leukocyte | 1.63e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 8.74e-14 | 120 |
hematopoietic stem cell | 3.56e-13 | 168 |
classical monocyte | 2.34e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.34e-12 | 42 |
hematopoietic oligopotent progenitor cell | 2.53e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.53e-12 | 161 |
hematopoietic cell | 2.57e-12 | 177 |
macrophage | 3.53e-11 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.09e-20 | 76 |
hematopoietic system | 5.57e-20 | 98 |
blood island | 5.57e-20 | 98 |
bone element | 5.70e-19 | 82 |
hemolymphoid system | 7.86e-18 | 108 |
skeletal element | 4.93e-17 | 90 |
immune system | 2.16e-16 | 93 |
skeletal system | 4.82e-15 | 100 |
surface | 1.59e-08 | 1 |
cranial nerve II | 1.84e-08 | 1 |
cranial nerve | 1.84e-08 | 1 |
nerve trunk | 1.84e-08 | 1 |
nerve connecting eye with brain | 1.84e-08 | 1 |
nerve | 1.84e-08 | 1 |
retinal neural layer | 1.84e-08 | 1 |
presumptive neural retina | 1.84e-08 | 1 |
lateral plate mesoderm | 6.40e-08 | 203 |
musculoskeletal system | 7.91e-08 | 167 |