FFCP PHASE1:Hg19::chr17:9548845..9548884,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=124739 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20072 | |||
|TSSclassifier=strong | |||
|UniProt=Q70EL4 | |||
|association_with_transcript=-65bp_to_ENST00000285199,NM_153210,uc010cod.2,uc010vva.1_5end | |||
|description=CAGE_peak_1_at_USP43_5end | |||
|id=chr17:9548845..9548884,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.04e-40!254;CL:0002076!5.63e-17!43;CL:0000223!1.76e-15!59;CL:0002368!1.02e-09!13;CL:0000082!4.32e-07!19;CL:0000039!9.23e-07!7;CL:0000586!9.23e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.96e-17;42!CL:0002368;3.88e-13;13!CL:0000039;9.47e-09;7!CL:0000586;9.47e-09;7!CL:0002202;1.56e-08;9!CL:0002632;1.56e-08;9!CL:0002251;2.44e-08;20!CL:1000507;5.21e-07;10!CL:1000494;5.21e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.91e-36,253;CL:0002076,2.85e-22,42;CL:0000223,1.86e-19,58;CL:0002368,3.85e-13,13;CL:0000039,8.92e-09,7;CL:0000586,8.92e-09,7;CL:0002202,1.69e-08,9;CL:0002632,1.69e-08,9;CL:0002251,2.02e-08,20;CL:1000507,4.62e-07,10;CL:1000494,4.62e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000223;7.10e-11;58!UBERON:0008947;2.51e-09;29!UBERON:0006595;4.67e-08;86 | |||
|ontology_enrichment_disease=DOID:305!4.79e-28!106;DOID:0050687!1.44e-19!143;DOID:1749!1.43e-10!14;DOID:299!1.23e-07!25;DOID:162!2.42e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.33e-14;14!DOID:299;2.26e-08;25!DOID:305;4.35e-08;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.24e-23,106;DOID:0050687,2.23e-17,143;DOID:1749,4.79e-14,14;DOID:299,1.81e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.20e-26!169;UBERON:0000925!1.20e-26!169;UBERON:0006595!1.20e-26!169;UBERON:0001007!4.75e-21!155;UBERON:0001555!4.75e-21!155;UBERON:0007026!4.75e-21!155;UBERON:0000064!1.76e-19!219;UBERON:0004921!3.20e-18!129;UBERON:0004185!3.20e-18!129;UBERON:0001004!1.56e-17!72;UBERON:0000062!3.68e-17!511;UBERON:0000077!4.34e-16!130;UBERON:0000065!1.10e-15!53;UBERON:0000481!1.89e-14!347;UBERON:0008947!4.43e-14!38;UBERON:0003258!4.43e-14!38;UBERON:0005911!7.47e-14!82;UBERON:0000466!1.78e-12!126;UBERON:0001041!2.93e-12!98;UBERON:0005177!6.28e-12!107;UBERON:0000464!7.68e-12!104;UBERON:0000072!1.06e-11!46;UBERON:0001008!4.65e-11!45;UBERON:0006554!8.24e-11!44;UBERON:0000063!1.77e-10!97;UBERON:0005153!2.01e-10!37;UBERON:0000922!4.03e-10!612;UBERON:0001048!4.77e-10!168;UBERON:0009569!2.52e-09!113;UBERON:0000468!3.08e-09!659;UBERON:0005178!4.33e-09!34;UBERON:0002224!4.33e-09!34;UBERON:0005181!1.40e-08!35;UBERON:0000467!1.56e-08!625;UBERON:0000480!2.02e-08!626;UBERON:0005157!2.27e-08!51;UBERON:0002048!2.68e-08!22;UBERON:0000117!2.68e-08!22;UBERON:0000171!2.68e-08!22;UBERON:0000170!2.68e-08!22;UBERON:0005597!2.68e-08!22;UBERON:0000118!2.68e-08!22;UBERON:0002050!3.60e-08!605;UBERON:0005423!3.60e-08!605;UBERON:0000923!5.68e-08!604;UBERON:0005291!5.68e-08!604;UBERON:0006598!5.68e-08!604;UBERON:0002532!5.68e-08!604;UBERON:0000475!7.91e-08!365;UBERON:0000058!1.05e-07!26;UBERON:0002113!1.21e-07!27;UBERON:0003918!1.21e-07!27;UBERON:0005095!1.21e-07!27;UBERON:0007687!1.21e-07!27;UBERON:0004802!4.32e-07!19;UBERON:0000115!4.32e-07!19;UBERON:0004807!6.83e-07!28;UBERON:0000153!9.12e-07!129;UBERON:0007811!9.12e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000065;7.77e-13;44!UBERON:0000072;7.55e-10;37!UBERON:0001004;3.33e-09;65!UBERON:0006554;3.79e-09;30!UBERON:0001008;3.79e-09;30!UBERON:0005911;7.12e-08;36!UBERON:0001737;8.13e-08;9!UBERON:0001557;8.13e-08;9!UBERON:0004807;9.03e-08;22!UBERON:0005178;1.13e-07;34!UBERON:0002224;1.13e-07;34!UBERON:0004211;5.21e-07;10!UBERON:0009773;5.21e-07;10!UBERON:0001231;5.21e-07;10!UBERON:0004810;5.21e-07;10!UBERON:0002048;5.78e-07;22!UBERON:0000117;5.78e-07;22!UBERON:0000171;5.78e-07;22!UBERON:0000170;5.78e-07;22!UBERON:0005181;8.92e-07;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,6.48e-26,160;UBERON:0000925,6.48e-26,160;UBERON:0006595,6.48e-26,160;UBERON:0001007,1.85e-20,145;UBERON:0001555,1.85e-20,145;UBERON:0007026,1.85e-20,145;UBERON:0004921,1.31e-18,118;UBERON:0001004,4.17e-17,74;UBERON:0000065,8.74e-15,54;UBERON:0008947,5.12e-14,38;UBERON:0003258,5.12e-14,38;UBERON:0001041,2.76e-13,87;UBERON:0005911,1.02e-12,82;UBERON:0005177,1.88e-12,101;UBERON:0006554,2.13e-12,47;UBERON:0001008,5.89e-12,48;UBERON:0005153,3.93e-10,37;UBERON:0000072,5.10e-10,47;UBERON:0009569,2.56e-09,112;UBERON:0005178,1.71e-08,34;UBERON:0002224,1.71e-08,34;UBERON:0011216,3.43e-08,223;UBERON:0005157,4.04e-08,47;UBERON:0005181,4.33e-08,35;UBERON:0001737,9.89e-08,9;UBERON:0002113,1.80e-07,26;UBERON:0003918,1.80e-07,26;UBERON:0011143,1.80e-07,26;UBERON:0005095,1.80e-07,26;UBERON:0007687,1.80e-07,26;UBERON:0001048,3.45e-07,160;UBERON:0004810,4.62e-07,10;UBERON:0002048,5.46e-07,22;UBERON:0000117,5.46e-07,22;UBERON:0000171,5.46e-07,22;UBERON:0000170,5.46e-07,22;UBERON:0005597,5.46e-07,22;UBERON:0000118,5.46e-07,22;UBERON:0006555,8.90e-07,16;UBERON:0004819,8.90e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,6.88055022204225,9.76921635161399,0.436882744260345,0.791300934685361,0,0,0,0,0,0,0.369363174230364,0.612002073732759,0.313454721478088,0.286235987131057,0.273748850145768,0.251085279189606,0,0,0,0,0,0,4.59710612239464,7.228942050678,9.98335827450327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89069634328136,1.55210578223795,1.31752178539689,0.982343066232845,2.91436230634034,2.22470665670658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.41359888642308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.69673839234836,5.72766853240753,5.16248271700207,4.26907971453584,4.90360142789496,4.18298194330266,3.00617059544574,3.78481276313443,3.28479623168247,0,0,0,0,0,2.60274960087657,3.20310911148393,2.6511213287183,2.42646740011267,3.05031221729369,4.03360052488864,1.75280700608214,3.13954344200554,3.46272441251751,0,0,0,0,0,10.8110993834539,14.1789577603537,0,3.32068784066407,0.857839051492628,3.84125998930189,2.24803506515239,1.60846355858609,1.38882667737794,0,0,0,0.579652024875384,0.234817388471643,0,0,0,9.4824527755113,7.72637545885385,0,0,0,8.43604505880993,6.2153387433578,2.83550194484773,2.5971971583826,3.19697332365358,8.81780162079986,0,0,0,0.576479813667846,0.25248486685276,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,1.66435439510497,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,5.07609688284813,12.4314011588037,7.18231713699991,0,0,0,4.96319574198153,3.00359814707218,3.13739907670742,2.92278449306521,1.68882606228601,1.13733384070897,0,0.215915916102139,0,0.541892875087706,1.50506932156456,6.37190682612596,4.98645605357235,2.68649705666614,0,0,0,0.328014645699706,0,19.5777922130672,0,0,1.72279661398852,7.15066270640173,0,0,0,0,0,0,0,0,0,7.93367593732695,9.99388350298552,17.2277161867689,11.7343025792438,0,0,0,0,0,0,0,0,0.744316738719335,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0.349934720244983,6.06199310170726,6.03272047982209,13.0669181833587,22.594512186427,7.31859133541091,5.05414427002877,4.43430153536676,4.82419140434615,0,0,0,0,0,0,0,0,0.106824071127473,0,6.86112604746889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.29848107592057,0,0,0,0,5.96861211844225,0.593929361665277,0.307160702099232,0,0.281338832821026,0.445234820091624,1.97764649072111,2.74463030566391,0.19924798825107,0.828851746593443,1.51159648712566,0,0,0,5.84144282457625,4.29650819221462,0,0.197286811273867,0,0,0.969332746095218,0.463840490809256,0,2.86470537193757,0.787139999965761,0,4.09656413827799,5.59358030644086,71.3890798939168,0,0,0,0,0.120596438625408,0,0.221158519862449,0,0.87754158861589,0.980446171670911,3.48559360696508,0.769502585037971,0,4.6112780877612,11.040190262402,16.5144005321452,48.8071774389837,8.33538099956947,28.2508431289876,0,0,0,0,0,0,0,0,0.421996129056054,4.73375143661528,2.96841450011276,0,8.95735737970654,7.60735054728717,0.611030144933625,0,0,0,0.269604531922708,0,0.234264445725339,0,5.86993856796269,0,15.3887917111262,3.62972148145992,0.30607276163049,0.063186579628488,9.77102226194202,0.933193722575224,0,0.330991955875499,0,0,0.853828638089378,0,8.67798691675655,4.50765028106137,8.44474303829905,1.04836000945218,3.0957485844891,0.677294319023596,0.877071805034227,0.821154570532092,2.03676934625681,0,0.451961481561065,0,0,1.51945910294109,19.9462410389499,3.76746455182208,3.62870091056899,0,6.77224960624298,0,0,0,0,26.1620378424643,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,7.38812301846267,0,0,0,0,2.32991899054908,0,0.164831716762333,0.0674035438541849,0.0984274815147488,0,0,0.136203406111576,5.78711334474069,5.91419577368105,2.9080823662043,0.449947783103001,2.32140586367385,1.88323625639876,3.35434687599266,2.20655980437755,2.6751839948849,0,0.717149357331379,8.63618387937504,0,0,0.25426853765475,0,0,0,0,0,0,0,4.83622371137672,1.32506888912221,0.129282956361551,0.13223260174269,0.171086837884329,4.22889013390003,1.9221734262185,1.57204305099666,2.07119527673598,0,0,0,3.83004754662109,0,0,0,0,1.09937867375164,0.886068179966986,1.22026264901963,0.876336514945499,0,0,0.124192805882767,0,0.74988244777264,0,0,0,0.936669811613763,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0.643324774124777,0.782982875895635,0,0.926089897295336,0.734210113519403,0.179088841081487,1.23520578864389,0.877136198314828,0,0.38582807654183,0,0.512483037175893,0,0.303859956177382,0.967809053062115,0,0,0,0,0,3.59230609709666,0,0,0,0,0,6.71421637053334,4.97661808026378,0,0,0,0,0,0,0,0,0,0.157723490002507,0.80057074828547,0,0.3062454773532,0.834979926253974,0,0.638535436228605,1.2306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| |||
|short_description=p1@USP43 | |||
}} |
Revision as of 13:52, 20 January 2014
Short description: | p1@USP43 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_USP43_5end |
Coexpression cluster: | NA |
Association with transcript: | -65bp_to_ENST00000285199, NM_153210, uc010cod.2, uc010vva.1_5end |
EntrezGene: | USP43 |
HGNC: | 20072 |
UniProt: | Q70EL4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.91e-36 | 253 |
endo-epithelial cell | 2.85e-22 | 42 |
endodermal cell | 1.86e-19 | 58 |
respiratory epithelial cell | 3.85e-13 | 13 |
germ line cell | 8.92e-09 | 7 |
germ cell | 8.92e-09 | 7 |
epithelial cell of tracheobronchial tree | 1.69e-08 | 9 |
epithelial cell of lower respiratory tract | 1.69e-08 | 9 |
epithelial cell of alimentary canal | 2.02e-08 | 20 |
kidney tubule cell | 4.62e-07 | 10 |
nephron tubule epithelial cell | 4.62e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.24e-23 | 106 |
cell type cancer | 2.23e-17 | 143 |
squamous cell carcinoma | 4.79e-14 | 14 |
adenocarcinoma | 1.81e-08 | 25 |