FFCP PHASE1:Hg19::chr18:47340297..47340335,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10449 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=83 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-14bp_to_uc002ldx.3_5end | |||
|description=CAGE_peak_4_at_ACAA2_5end | |||
|id=chr18:47340297..47340335,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!8.75e-07!22;DOID:2994!8.75e-07!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:3095,6.22e-07,22;DOID:2994,6.22e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.92e-25!94;UBERON:0001016!2.92e-25!94;UBERON:0005743!1.18e-24!86;UBERON:0001017!2.84e-23!82;UBERON:0002346!1.59e-19!90;UBERON:0001049!6.78e-19!57;UBERON:0005068!6.78e-19!57;UBERON:0006241!6.78e-19!57;UBERON:0007135!6.78e-19!57;UBERON:0000955!8.41e-19!69;UBERON:0006238!8.41e-19!69;UBERON:0003075!2.30e-18!86;UBERON:0007284!2.30e-18!86;UBERON:0002616!2.61e-17!59;UBERON:0002780!2.77e-15!41;UBERON:0001890!2.77e-15!41;UBERON:0006240!2.77e-15!41;UBERON:0003080!8.14e-15!42;UBERON:0003056!2.45e-13!61;UBERON:0002020!3.37e-13!34;UBERON:0003528!3.37e-13!34;UBERON:0001893!6.20e-13!34;UBERON:0002791!1.31e-12!33;UBERON:0000924!1.56e-12!173;UBERON:0006601!1.56e-12!173;UBERON:0001869!7.54e-12!32;UBERON:0004121!1.26e-11!169;UBERON:0007023!8.18e-11!115;UBERON:0000153!5.55e-10!129;UBERON:0007811!5.55e-10!129;UBERON:0000033!3.68e-09!123;UBERON:0000956!1.04e-08!25;UBERON:0000203!1.04e-08!25;UBERON:0002619!1.17e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.03e-11;34!UBERON:0002020;1.03e-11;34!UBERON:0002780;1.39e-11;41!UBERON:0001890;1.39e-11;41!UBERON:0001893;3.63e-11;34!UBERON:0000073;3.74e-11;53!UBERON:0002616;3.74e-11;53!UBERON:0002791;5.12e-11;32!UBERON:0001869;7.69e-11;32!UBERON:0001017;4.41e-09;75!UBERON:0000956;9.89e-09;25!UBERON:0000203;9.89e-09;25!UBERON:0001016;1.29e-08;83!UBERON:0000955;2.29e-08;68!UBERON:0002619;1.07e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.31e-25,89;UBERON:0001017,3.26e-24,81;UBERON:0002346,1.92e-20,86;UBERON:0001049,9.13e-20,56;UBERON:0005068,9.13e-20,56;UBERON:0006241,9.13e-20,56;UBERON:0007135,9.13e-20,56;UBERON:0000955,1.33e-19,68;UBERON:0006238,1.33e-19,68;UBERON:0003075,3.04e-19,82;UBERON:0007284,3.04e-19,82;UBERON:0000073,6.02e-18,53;UBERON:0002616,6.02e-18,53;UBERON:0002780,2.22e-15,41;UBERON:0001890,2.22e-15,41;UBERON:0003080,2.22e-15,41;UBERON:0006240,2.22e-15,41;UBERON:0003056,2.51e-14,61;UBERON:0003528,3.09e-13,34;UBERON:0002020,3.09e-13,34;UBERON:0001893,5.76e-13,34;UBERON:0002791,4.69e-12,32;UBERON:0004121,6.51e-12,171;UBERON:0000924,6.51e-12,171;UBERON:0006601,6.51e-12,171;UBERON:0001869,7.40e-12,32;UBERON:0010371,9.75e-12,104;UBERON:0007023,1.23e-10,114;UBERON:0011216,2.27e-09,223;UBERON:0010314,1.15e-08,132;UBERON:0000956,1.20e-08,25;UBERON:0000203,1.20e-08,25;UBERON:0002619,1.42e-07,22 | |||
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| |||
|short_description=p4@ACAA2 | |||
}} |
Revision as of 19:20, 20 January 2014
Short description: | p4@ACAA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ACAA2_5end |
Coexpression cluster: | NA |
Association with transcript: | -14bp_to_uc002ldx.3_5end |
EntrezGene: | ACAA2 |
HGNC: | 83 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 8.31e-25 | 89 |
central nervous system | 3.26e-24 | 81 |
neurectoderm | 1.92e-20 | 86 |
neural tube | 9.13e-20 | 56 |
neural rod | 9.13e-20 | 56 |
future spinal cord | 9.13e-20 | 56 |
neural keel | 9.13e-20 | 56 |
brain | 1.33e-19 | 68 |
future brain | 1.33e-19 | 68 |
neural plate | 3.04e-19 | 82 |
presumptive neural plate | 3.04e-19 | 82 |
regional part of nervous system | 6.02e-18 | 53 |
regional part of brain | 6.02e-18 | 53 |
regional part of forebrain | 2.22e-15 | 41 |
forebrain | 2.22e-15 | 41 |
anterior neural tube | 2.22e-15 | 41 |
future forebrain | 2.22e-15 | 41 |
pre-chordal neural plate | 2.51e-14 | 61 |
brain grey matter | 3.09e-13 | 34 |
gray matter | 3.09e-13 | 34 |
telencephalon | 5.76e-13 | 34 |
regional part of telencephalon | 4.69e-12 | 32 |
ectoderm-derived structure | 6.51e-12 | 171 |
ectoderm | 6.51e-12 | 171 |
presumptive ectoderm | 6.51e-12 | 171 |
cerebral hemisphere | 7.40e-12 | 32 |
ecto-epithelium | 9.75e-12 | 104 |
adult organism | 1.23e-10 | 114 |
organ system subdivision | 2.27e-09 | 223 |
structure with developmental contribution from neural crest | 1.15e-08 | 132 |
cerebral cortex | 1.20e-08 | 25 |
pallium | 1.20e-08 | 25 |
regional part of cerebral cortex | 1.42e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 6.22e-07 | 22 |
germ cell cancer | 6.22e-07 | 22 |