FFCP PHASE1:Hg19::chr19:676385..676403,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10272 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3973 | |||
|TSSclassifier=strong | |||
|UniProt=O95633 | |||
|association_with_transcript=0bp_to_ENST00000166139,NM_005860,uc002lpk.1_5end | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_1_at_FSTL3_5end | |||
|id=chr19:676385..676403,+ | |||
|ontology_enrichment_celltype=CL:0000220!1.62e-17!246;CL:0002321!9.25e-17!248;CL:0000066!3.87e-16!254;CL:0000055!1.08e-12!180;CL:0000222!1.75e-11!119;CL:0000183!3.12e-09!59;CL:0000680!4.82e-09!57;CL:0000056!4.82e-09!57;CL:0000355!4.82e-09!57;CL:0000187!2.53e-08!54;CL:0000548!4.79e-08!679;CL:0000004!4.79e-08!679;CL:0000255!4.79e-08!679;CL:0000192!6.47e-08!42;CL:0000514!6.47e-08!42;CL:0000012!2.09e-07!682;CL:0002076!3.24e-07!43;CL:0000144!5.86e-07!625;CL:0000325!7.40e-07!39 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.05e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.87e-16,250;CL:0000066,1.23e-15,253;CL:0000222,1.23e-11,121;CL:0000349,1.06e-09,19;CL:0000680,3.06e-09,58;CL:0000056,3.06e-09,58;CL:0000355,3.06e-09,58;CL:0000187,1.63e-08,55;CL:0000192,4.24e-08,43;CL:0000514,4.24e-08,43;CL:0002076,5.00e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!6.71e-21!216;UBERON:0003104!1.80e-19!238;UBERON:0009142!1.80e-19!238;UBERON:0005256!3.97e-17!143;UBERON:0000468!1.95e-16!659;UBERON:0000481!2.00e-16!347;UBERON:0000475!4.22e-16!365;UBERON:0000467!1.02e-13!625;UBERON:0000480!2.16e-13!626;UBERON:0000478!1.39e-12!24;UBERON:0000119!4.56e-12!312;UBERON:0000483!8.15e-12!309;UBERON:0000486!1.56e-11!82;UBERON:0000926!9.00e-11!448;UBERON:0004120!9.00e-11!448;UBERON:0006603!9.00e-11!448;UBERON:0002050!9.93e-11!605;UBERON:0005423!9.93e-11!605;UBERON:0000923!1.16e-10!604;UBERON:0005291!1.16e-10!604;UBERON:0006598!1.16e-10!604;UBERON:0002532!1.16e-10!604;UBERON:0003914!1.68e-10!118;UBERON:0000914!2.19e-10!83;UBERON:0002329!2.19e-10!83;UBERON:0003077!2.19e-10!83;UBERON:0003059!2.19e-10!83;UBERON:0007282!2.19e-10!83;UBERON:0009618!2.19e-10!83;UBERON:0007285!2.19e-10!83;UBERON:0009569!4.97e-10!113;UBERON:0004923!8.40e-10!57;UBERON:0000064!8.59e-10!219;UBERON:0000922!1.00e-09!612;UBERON:0004119!3.75e-09!169;UBERON:0000925!3.75e-09!169;UBERON:0006595!3.75e-09!169;UBERON:0000490!5.01e-09!138;UBERON:0000062!7.51e-09!511;UBERON:0004290!7.95e-09!70;UBERON:0000466!2.45e-08!126;UBERON:0001134!2.66e-08!61;UBERON:0002036!2.66e-08!61;UBERON:0003082!2.66e-08!61;UBERON:0002385!3.01e-08!63;UBERON:0001015!3.01e-08!63;UBERON:0000383!3.01e-08!63;UBERON:0005631!3.87e-08!14;UBERON:0000158!3.87e-08!14;UBERON:0000464!4.87e-08!104;UBERON:0001048!5.82e-08!168;UBERON:0003064!1.10e-07!37;UBERON:0003103!1.88e-07!69;UBERON:0004872!2.03e-07!84;UBERON:0000477!3.48e-07!286;UBERON:0001008!4.21e-07!45;UBERON:0006554!5.21e-07!44;UBERON:0002049!9.70e-07!79;UBERON:0007798!9.70e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.11e-12;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,7.63e-19,199;UBERON:0003104,1.26e-16,160;UBERON:0009142,1.26e-16,160;UBERON:0005256,1.07e-12,122;UBERON:0000478,1.12e-12,24;UBERON:0000486,9.29e-12,83;UBERON:0000119,2.37e-11,309;UBERON:0000483,4.17e-11,306;UBERON:0007503,1.02e-10,78;UBERON:0004923,1.72e-10,66;UBERON:0003914,1.93e-10,117;UBERON:0000490,5.51e-10,148;UBERON:0009569,1.04e-09,112;UBERON:0004119,3.70e-09,160;UBERON:0000925,3.70e-09,160;UBERON:0006595,3.70e-09,160;UBERON:0002329,5.06e-09,71;UBERON:0003059,5.06e-09,71;UBERON:0007282,5.06e-09,71;UBERON:0004290,5.06e-09,71;UBERON:0009618,5.06e-09,71;UBERON:0001008,8.60e-09,48;UBERON:0003077,1.02e-08,72;UBERON:0007285,1.02e-08,72;UBERON:0006554,1.06e-08,47;UBERON:0007524,1.32e-08,73;UBERON:0001134,1.72e-08,62;UBERON:0002036,1.72e-08,62;UBERON:0003082,1.72e-08,62;UBERON:0002385,1.95e-08,64;UBERON:0001015,1.95e-08,64;UBERON:0000383,1.95e-08,64;UBERON:0005631,3.40e-08,14;UBERON:0000158,3.40e-08,14;UBERON:0001048,5.41e-08,160;UBERON:0005423,8.10e-08,581;UBERON:0003103,2.60e-07,68;UBERON:0004872,4.22e-07,83;UBERON:0000922,4.55e-07,592 | |||
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| |||
|short_description=p1@FSTL3 | |||
}} |
Revision as of 20:06, 20 January 2014
Short description: | p1@FSTL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FSTL3_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000166139, NM_005860, uc002lpk.1_5end |
EntrezGene: | FSTL3 |
HGNC: | 3973 |
UniProt: | O95633 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.87e-16 | 250 |
epithelial cell | 1.23e-15 | 253 |
mesodermal cell | 1.23e-11 | 121 |
extraembryonic cell | 1.06e-09 | 19 |
muscle precursor cell | 3.06e-09 | 58 |
myoblast | 3.06e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.06e-09 | 58 |
muscle cell | 1.63e-08 | 55 |
smooth muscle cell | 4.24e-08 | 43 |
smooth muscle myoblast | 4.24e-08 | 43 |
endo-epithelial cell | 5.00e-07 | 42 |