FFCP PHASE1:Hg19::chr2:27505483..27505518,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=57159 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16008 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-81bp_to_uc002rjn.2,uc002rjo.2_5end | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_2_at_TRIM54_5end | |||
|id=chr2:27505483..27505518,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.28e-08!6;CL:0000031!1.28e-08!6;CL:0000404!1.28e-08!6;CL:0000319!9.25e-07!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010226;5.53e-17;1!UBERON:0010227;1.04e-16;1!UBERON:0005062;2.44e-16;4!UBERON:0007284;2.44e-16;4!UBERON:0003104;7.24e-12;31!UBERON:0008814;7.49e-09;2!UBERON:0010056;7.49e-09;2 | |||
|ontology_enrichment_disease=DOID:114!3.17e-12!2;DOID:3030!9.25e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:114;4.02e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,4.02e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.00e-16!115;UBERON:0001630!1.61e-12!2;UBERON:0005090!1.61e-12!2;UBERON:0007100!2.22e-12!27;UBERON:0003135!4.12e-12!11;UBERON:0000341!4.68e-12!2;UBERON:0003978!1.01e-08!3;UBERON:0009751!1.01e-08!3;UBERON:0000946!1.01e-08!3;UBERON:0002523!1.01e-08!3;UBERON:0005983!1.01e-08!3;UBERON:0002165!1.01e-08!3;UBERON:0002062!1.01e-08!3;UBERON:0007280!1.01e-08!3;UBERON:0004151!1.05e-08!3;UBERON:0001723!1.70e-08!3;UBERON:0001033!1.70e-08!3;UBERON:0010056!1.70e-08!3;UBERON:0003103!7.72e-08!69;UBERON:0002084!3.13e-07!1;UBERON:0002082!3.13e-07!1;UBERON:0004706!3.13e-07!1;UBERON:0002135!3.52e-07!1;UBERON:0002146!3.73e-07!1;UBERON:0005623!3.73e-07!1;UBERON:0002426!3.95e-07!1;UBERON:0003831!3.95e-07!1;UBERON:0003898!3.95e-07!1;UBERON:0004830!3.95e-07!1;UBERON:0001774!3.95e-07!1;UBERON:0003830!3.95e-07!1;UBERON:0005175!3.95e-07!1;UBERON:0003897!3.95e-07!1;UBERON:0001103!3.95e-07!1;UBERON:0010084!3.95e-07!1;UBERON:0002079!4.43e-07!1;UBERON:0005418!4.69e-07!1;UBERON:0001389!4.69e-07!1;UBERON:0000026!4.69e-07!1;UBERON:0008784!4.69e-07!1;UBERON:0006058!4.69e-07!1;UBERON:0003663!4.69e-07!1;UBERON:0001383!4.69e-07!1;UBERON:0004256!4.69e-07!1;UBERON:0002529!4.69e-07!1;UBERON:0004708!4.69e-07!1;UBERON:0002101!4.69e-07!1;UBERON:0004709!4.69e-07!1;UBERON:0003661!4.69e-07!1;UBERON:0002471!4.69e-07!1;UBERON:0004357!4.69e-07!1;UBERON:0009872!4.69e-07!1;UBERON:0004347!4.69e-07!1;UBERON:0005420!4.69e-07!1;UBERON:0005732!4.69e-07!1;UBERON:0006057!4.69e-07!1;UBERON:0000978!4.69e-07!1;UBERON:0002103!4.69e-07!1;UBERON:0001665!4.69e-07!1;UBERON:0003823!4.69e-07!1;UBERON:0000154!4.69e-07!1;UBERON:0005733!4.69e-07!1;UBERON:0005730!4.69e-07!1;UBERON:0000989!6.60e-07!1;UBERON:0008811!6.60e-07!1;UBERON:0006258!6.60e-07!1;UBERON:0005876!6.60e-07!1;UBERON:0004874!6.60e-07!1;UBERON:0007029!6.99e-07!1;UBERON:0001301!7.82e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0005090;2.97e-31;2!UBERON:0001630;2.97e-31;2!UBERON:0007100;4.70e-22;25!UBERON:0004151;1.29e-21;3!UBERON:0003978;1.96e-21;3!UBERON:0000946;1.96e-21;3!UBERON:0001723;5.46e-21;3!UBERON:0001033;5.46e-21;3!UBERON:0002084;5.53e-17;1!UBERON:0002082;5.53e-17;1!UBERON:0002079;1.04e-16;1!UBERON:0002135;1.04e-16;1!UBERON:0002146;1.04e-16;1!UBERON:0002426;1.04e-16;1!UBERON:0003831;1.04e-16;1!UBERON:0003898;1.04e-16;1!UBERON:0004830;1.04e-16;1!UBERON:0005623;1.04e-16;1!UBERON:0003830;1.04e-16;1!UBERON:0005175;1.04e-16;1!UBERON:0001774;1.04e-16;1!UBERON:0001103;1.04e-16;1!UBERON:0001389;2.25e-16;1!UBERON:0000026;2.25e-16;1!UBERON:0008784;2.25e-16;1!UBERON:0006058;2.25e-16;1!UBERON:0003663;2.25e-16;1!UBERON:0004256;2.25e-16;1!UBERON:0004708;2.25e-16;1!UBERON:0002101;2.25e-16;1!UBERON:0004709;2.25e-16;1!UBERON:0002529;2.25e-16;1!UBERON:0010538;2.25e-16;1!UBERON:0003661;2.25e-16;1!UBERON:0010890;2.25e-16;1!UBERON:0002471;2.25e-16;1!UBERON:0001383;2.25e-16;1!UBERON:0010758;2.25e-16;1!UBERON:0010707;2.25e-16;1!UBERON:0000978;2.25e-16;1!UBERON:0002103;2.25e-16;1!UBERON:0001665;2.25e-16;1!UBERON:0003823;2.25e-16;1!UBERON:0000154;2.25e-16;1!UBERON:0010709;2.25e-16;1!UBERON:0001134;1.64e-15;16!UBERON:0002036;1.64e-15;16!UBERON:0000948;1.55e-11;22!UBERON:0002081;5.08e-09;2!UBERON:0002133;5.08e-09;2!UBERON:0000341;7.49e-09;2!UBERON:0002385;2.07e-08;31!UBERON:0001015;2.07e-08;31!UBERON:0000383;2.07e-08;31!UBERON:0010313;4.39e-07;10 | |||
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|short_description=p2@TRIM54 | |||
}} |
Revision as of 02:15, 21 January 2014
Short description: | p2@TRIM54 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_TRIM54_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -81bp_to_uc002rjn.2, uc002rjo.2_5end |
EntrezGene: | TRIM54 |
HGNC: | 16008 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 4.02e-09 | 2 |