FFCP PHASE1:Hg19::chr2:216288084..216288131,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_at_chr2:216288084..216288131,+ | |||
|id=chr2:216288084..216288131,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.74e-31!180;CL:0000057!4.68e-23!75;CL:0002371!6.69e-19!591;CL:0000144!2.51e-16!625;CL:0000680!2.48e-12!57;CL:0000056!2.48e-12!57;CL:0000355!2.48e-12!57;CL:0000183!5.50e-12!59;CL:0000548!1.04e-11!679;CL:0000004!1.04e-11!679;CL:0000255!1.04e-11!679;CL:0000012!3.20e-11!682;CL:0000187!4.66e-11!54;CL:0000048!9.68e-10!430;CL:0000723!1.94e-09!436;CL:0000393!2.25e-09!60;CL:0000211!2.25e-09!60;CL:0000034!6.15e-09!444;CL:0002620!9.87e-09!23;CL:0000220!1.02e-08!246;CL:0002321!2.24e-08!248;CL:0002334!6.37e-08!12;CL:0000222!9.49e-08!119;CL:0000192!2.84e-07!42;CL:0000514!2.84e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000134;6.59e-15;55!CL:0000723;1.98e-13;61!CL:0000048;4.41e-12;58!CL:0002620;5.23e-11;23!CL:0000057;5.93e-11;73!CL:0000034;5.57e-10;69!CL:0002320;2.06e-09;188!CL:0000349;4.44e-09;19!CL:0002334;1.30e-08;12!CL:0000187;2.94e-08;55!CL:0002570;5.82e-08;8!CL:0002494;2.58e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.31e-28,76;CL:0000048,1.43e-20,427;CL:0000723,4.74e-20,433;CL:0000034,1.03e-18,441;CL:0000680,2.45e-14,58;CL:0000056,2.45e-14,58;CL:0000355,2.45e-14,58;CL:0000187,9.16e-13,55;CL:0002320,5.93e-12,361;CL:0002620,3.46e-11,23;CL:0000393,2.61e-10,61;CL:0000211,2.61e-10,61;CL:0000134,8.48e-10,354;CL:0000349,5.39e-09,19;CL:0002334,1.30e-08,12;CL:0000219,5.84e-08,386;CL:0002570,7.04e-08,8;CL:0000192,7.08e-08,43;CL:0000514,7.08e-08,43;CL:0002494,2.61e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000355;4.49e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;3.28e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.33e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.58e-14!83;UBERON:0002329!2.58e-14!83;UBERON:0003077!2.58e-14!83;UBERON:0003059!2.58e-14!83;UBERON:0007282!2.58e-14!83;UBERON:0009618!2.58e-14!83;UBERON:0007285!2.58e-14!83;UBERON:0004290!1.93e-12!70;UBERON:0005256!5.72e-12!143;UBERON:0000486!2.86e-11!82;UBERON:0001134!5.32e-11!61;UBERON:0002036!5.32e-11!61;UBERON:0003082!5.32e-11!61;UBERON:0002385!1.04e-10!63;UBERON:0001015!1.04e-10!63;UBERON:0000383!1.04e-10!63;UBERON:0004872!6.86e-10!84;UBERON:0003102!1.72e-08!95;UBERON:0002049!1.73e-08!79;UBERON:0007798!1.73e-08!79;UBERON:0000490!2.05e-08!138;UBERON:0004923!3.21e-08!57;UBERON:0004535!5.07e-08!110;UBERON:0003914!6.14e-08!118;UBERON:0001013!8.37e-08!14;UBERON:0001009!1.29e-07!113;UBERON:0002199!2.28e-07!45;UBERON:0002416!2.28e-07!45;UBERON:0002100!7.44e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;8.43e-10;14!UBERON:0002384;2.99e-09;198!UBERON:0000478;5.85e-08;24!UBERON:0002385;9.60e-08;31!UBERON:0001015;9.60e-08;31!UBERON:0000383;9.60e-08;31!UBERON:0002204;1.33e-07;70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,8.44e-15,73;UBERON:0002329,9.85e-15,71;UBERON:0003059,9.85e-15,71;UBERON:0007282,9.85e-15,71;UBERON:0004290,9.85e-15,71;UBERON:0009618,9.85e-15,71;UBERON:0003077,2.61e-14,72;UBERON:0007285,2.61e-14,72;UBERON:0007503,2.84e-13,78;UBERON:0001134,1.56e-12,62;UBERON:0002036,1.56e-12,62;UBERON:0003082,1.56e-12,62;UBERON:0000486,3.72e-12,83;UBERON:0002384,4.59e-12,371;UBERON:0002385,9.95e-12,64;UBERON:0001015,9.95e-12,64;UBERON:0000383,9.95e-12,64;UBERON:0000926,5.10e-10,315;UBERON:0004120,5.10e-10,315;UBERON:0006603,5.10e-10,315;UBERON:0005256,5.72e-10,122;UBERON:0001013,1.12e-09,14;UBERON:0002199,1.47e-09,46;UBERON:0002416,1.47e-09,46;UBERON:0003104,8.02e-09,160;UBERON:0009142,8.02e-09,160;UBERON:0000490,1.31e-08,148;UBERON:0004872,1.47e-08,83;UBERON:0004923,5.65e-08,66;UBERON:0000478,6.25e-08,24;UBERON:0003102,1.27e-07,99;UBERON:0005631,1.46e-07,14;UBERON:0000158,1.46e-07,14;UBERON:0002097,1.59e-07,41;UBERON:0004535,4.52e-07,109 | |||
|phase1_expression=3.81524596468169,2.78330681058278,5.21531295155093,9.00659685178174,10.7270662662549,27.9148327712118,5.06599756336621,1.26343974685366,1.56711376919903,0,1.39560233594486,1.96597234917155,6.33040747748289,4.08428964768154,6.95934489028623,9.41255205032485,3.01347264011988,4.38186054232424,4.39139518911456,0,1.83600622119828,1.25381888591235,0.572471974262113,0.273748850145768,1.75759695432724,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.4624275105164,8.82251676720359,1.0843174571537,0.50133791063589,2.89693037921647,0,41.363963975724,0.378139268656271,3.54767035940102,2.10803485663503,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0.347140501607594,0.56530794192401,4.61449379830897,3.02629846134074,0,1.55050055501597,0,0,0,0,0.976248230192678,0,9.72170337458112,0.357198913136319,0.44905874525234,0,0,0,0.916008719652036,0,0,0.436094052142534,16.4000744059455,5.31848148991235,18.6696944946639,31.2651916616207,3.54668382198357,3.36406560085384,1.06748995729705,11.3467072271894,1.8672662123986,9.56445771694785,9.80771418680752,3.48122083583342,12.09969441408,0.468642863667593,6.55536161343673,0,11.5075484024887,4.93224894303812,5.01806127541208,5.89893388149444,1.42907919878425,3.68502951935304,1.85986406116378,1.18800285728205,4.69807165629258,0,5.03032699271367,1.85169725349473,2.12701483782339,0,1.31693286264251,7.04921930337745,2.85452311922534,5.44474479168101,11.3015470483983,1.92201649936711,4.87443372666992,21.606558918077,1.54578793857658,20.0959621235591,1.48893485065272,7.42615861861571,3.60516919096435,24.4860761016791,4.32634523618807,1.93975268182574,13.845374108148,2.01504196455281,1.18692414617341,0.57978255948989,0.545492241181669,0,0,0,0.232387885739037,0.207322110030741,0.252320850875628,0,0,10.2918550110862,0,17.1816133371832,21.6563844500876,0,0.168584690078102,0,0,0,0,0,0,0,0,2.80483547606892,4.9388881359768,1.47008711385542,0,0,0,0,0.245976877086227,1.02940686179115,1.97550513735526,0,0,0.370353780634118,0,2.07986957055916,2.88662684050547,0,3.17003474436719,0.144366447761074,0.925971025153221,1.33177906564219,0,0,0,0,0.148631162288728,0,1.51183915378974,0.567100388969546,8.95585227028483,2.90633938513962,1.15014803749563,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,1.23392991243988,0.300343057843917,0.285826432630578,0.224262168690721,0.87192013766656,0.4400297149257,1.03417372606222,17.8828222925941,9.298330278116,0,1.04007436911366,3.85811061393213,4.25547396069835,4.52917704327369,2.00169191121407,0.542621605391443,1.64648067356154,6.5147236858747,2.84313558994037,4.75171123760058,1.20575750823834,0,0.199945982364114,0,0,0,7.18874566474748,8.04033550838797,0,5.35690834670043,10.4792924500696,1.79060963239896,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,2.20844685094452,12.5042630264919,17.3609615167831,25.9963576913509,31.938788994692,18.7665873890382,7.37990914454093,0.902838299183157,0,4.1389228517002,1.99267679560631,2.21243002250044,1.73767228936166,1.17480694477644,4.80400793335198,0,0,0,1.5156378572313,3.32870879020994,6.95497674658265,7.93944985020086,18.5688987678556,15.9976253826852,5.76626171650654,3.07024349440022,7.39928037260594,17.8101679733989,3.23840356985577,10.1210183428482,2.87445046048332,0.519254429183621,10.8075651967762,0.604297247958111,4.21063587636898,0.0920809889358963,1.95184561879831,1.45672934405374,1.57349297951309,0.451199612907412,0.693138033939733,0,0,0.633309773357254,0,0.510281115829547,1.29549549661284,0,0.812839312631559,0.501689773854853,0,0,1.11937377361089,0,0,0,0.328014645699706,0.325378394664303,1.23649213977267,0.0915694648183434,0,0.574265537996172,0.650060246036521,0,3.67348729510063,10.9374518151398,15.5038711473391,7.99452120410277,8.48619934459362,13.0515024522806,4.43178462563725,2.31483292681517,4.13212288402445,5.57351195358808,0.382838137483752,0.50578890427775,1.39453664789186,26.7590494806044,0.6970372701606,1.54016790088044,1.06461206063404,0,1.66791797193528,0,4.09374206295634,5.37845022021834,2.09693213316207,1.79128453917934,1.28381696410176,0,1.56989728039846,3.59744915166629,2.19629623788844,1.88499843753098,0.606547444719948,1.58510321173008,0,0,3.89941583410055,0,1.09199929126389,0.707027159768564,3.39024349860728,1.10273068709225,1.32687795048244,1.75380354101505,1.15755106853338,3.9353685122798,0,1.8589409885985,1.97186921772569,1.57752487424457,7.56517615801033,0.35667105148125,0,5.69990615303693,27.9900659015917,0.379473173765715,1.74967360122491,0,0,0,1.22386941009813,0,0,0,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,5.01363417949149,1.78178808499583,4.30024982938925,0,0,10.685635682199,0,0.211125408127993,1.79323189425963,0,0,0,0,10.5753459805015,0,0,0,0.295930216910801,0,0,0.969332746095218,0,0,0,0,0.7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| |||
|short_description=p@chr2:216288084..216288131,+ | |||
}} |
Revision as of 08:26, 21 January 2014
Short description: | p@chr2:216288084..216288131, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:216288084..216288131, + |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.31e-28 | 76 |
multi fate stem cell | 1.43e-20 | 427 |
somatic stem cell | 4.74e-20 | 433 |
stem cell | 1.03e-18 | 441 |
muscle precursor cell | 2.45e-14 | 58 |
myoblast | 2.45e-14 | 58 |
multi-potent skeletal muscle stem cell | 2.45e-14 | 58 |
muscle cell | 9.16e-13 | 55 |
connective tissue cell | 5.93e-12 | 361 |
skin fibroblast | 3.46e-11 | 23 |
electrically responsive cell | 2.61e-10 | 61 |
electrically active cell | 2.61e-10 | 61 |
mesenchymal cell | 8.48e-10 | 354 |
extraembryonic cell | 5.39e-09 | 19 |
preadipocyte | 1.30e-08 | 12 |
motile cell | 5.84e-08 | 386 |
mesenchymal stem cell of adipose | 7.04e-08 | 8 |
smooth muscle cell | 7.08e-08 | 43 |
smooth muscle myoblast | 7.08e-08 | 43 |
cardiocyte | 2.61e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.33e-08 | 14 |