FFCP PHASE1:Hg19::chr20:4803297..4803323,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2621 | |||
|description=CAGE_peak_at_chr20:4803297..4803323,- | |||
|id=chr20:4803297..4803323,- | |||
|ontology_enrichment_celltype=CL:0000037!3.40e-73!172;CL:0000566!3.40e-73!172;CL:0000738!2.74e-71!140;CL:0002032!1.16e-70!165;CL:0000837!1.16e-70!165;CL:0000988!1.68e-69!182;CL:0002031!3.31e-56!124;CL:0000763!8.23e-53!112;CL:0000049!8.23e-53!112;CL:0002087!8.82e-53!119;CL:0000766!7.47e-48!76;CL:0000557!4.53e-43!71;CL:0000839!7.58e-40!70;CL:0002009!1.34e-37!65;CL:0002194!8.66e-36!63;CL:0000576!8.66e-36!63;CL:0000040!8.66e-36!63;CL:0000559!8.66e-36!63;CL:0002057!1.32e-35!42;CL:0000860!7.02e-32!45;CL:0000542!5.29e-15!53;CL:0000051!5.29e-15!53;CL:0000838!1.87e-14!52;CL:0000134!5.04e-13!358;CL:0002320!5.70e-12!365;CL:0000451!2.26e-09!10;CL:0000219!5.80e-09!390;CL:0000094!8.64e-09!8;CL:0002393!5.97e-08!9;CL:0002397!5.97e-08!9;CL:0000990!6.08e-08!8;CL:0000945!2.32e-07!24;CL:0000826!2.32e-07!24;CL:0000084!5.24e-07!25;CL:0000827!5.24e-07!25;CL:0000791!7.19e-07!18;CL:0000789!7.19e-07!18;CL:0002420!7.19e-07!18;CL:0002419!7.19e-07!18;CL:0000790!7.19e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.29e-48;33!CL:0002057;2.29e-48;33!CL:0000473;1.13e-41;39!CL:0000234;1.13e-41;39!CL:0000576;4.92e-37;48!CL:0000766;3.86e-35;69!CL:0000763;3.61e-20;100!CL:0000738;1.06e-16;136!CL:0002087;9.88e-16;104!CL:0000094;4.14e-15;8!CL:0000988;1.55e-12;177!CL:0000453;1.50e-10;5!CL:0000081;1.82e-10;11!CL:0002393;2.22e-10;6!CL:0002397;2.22e-10;6!CL:0000451;4.16e-10;10!CL:0000097;9.21e-10;5!CL:0000219;5.87e-08;193!CL:0000990;1.26e-07;8!CL:0000775;4.54e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.56e-78,108;CL:0000049,1.56e-78,108;CL:0000766,3.06e-78,72;CL:0000738,7.21e-78,136;CL:0000037,1.16e-76,168;CL:0002032,3.15e-73,161;CL:0000837,3.15e-73,161;CL:0000988,1.97e-71,177;CL:0000557,2.26e-69,67;CL:0000473,1.03e-67,48;CL:0000234,1.03e-67,48;CL:0000860,4.21e-66,42;CL:0002057,4.21e-66,42;CL:0000839,8.31e-62,66;CL:0002009,2.94e-59,61;CL:0002194,6.40e-56,59;CL:0000576,6.40e-56,59;CL:0000040,6.40e-56,59;CL:0000559,6.40e-56,59;CL:0002031,2.49e-54,120;CL:0002087,1.31e-48,115;CL:0000134,1.08e-22,354;CL:0002320,9.29e-22,361;CL:0000219,1.77e-18,386;CL:0000094,3.36e-15,8;CL:0000048,1.65e-14,427;CL:0000723,5.75e-14,433;CL:0000034,8.17e-14,441;CL:0002393,1.28e-13,9;CL:0002397,1.28e-13,9;CL:0000453,1.42e-10,5;CL:0000081,1.58e-10,11;CL:0000451,3.99e-10,10;CL:0000097,6.58e-10,5;CL:0002028,6.58e-10,5;CL:0000990,1.31e-07,8;CL:0000775,4.47e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.69e-47;42!CL:0000049;3.05e-20;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.26e-48!102;UBERON:0003061!1.26e-48!102;UBERON:0002193!6.17e-46!112;UBERON:0002371!5.25e-36!80;UBERON:0001474!1.53e-31!86;UBERON:0002405!2.23e-26!115;UBERON:0004765!6.97e-23!101;UBERON:0001434!6.97e-23!101;UBERON:0003081!2.40e-13!216;UBERON:0007023!8.84e-13!115;UBERON:0002384!7.34e-11!375;UBERON:0000178!1.82e-09!15;UBERON:0000179!1.82e-09!15;UBERON:0000463!1.82e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.85e-10;15!UBERON:0000179;5.85e-10;15!UBERON:0000463;5.85e-10;15!UBERON:0002390;7.65e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.10e-68,98;UBERON:0003061,1.10e-68,98;UBERON:0002193,1.35e-64,108;UBERON:0002371,4.10e-59,76;UBERON:0002405,1.53e-54,93;UBERON:0001474,1.60e-53,82;UBERON:0004765,3.16e-47,90;UBERON:0001434,8.85e-41,100;UBERON:0003081,1.43e-23,203;UBERON:0002384,1.74e-20,371;UBERON:0002204,8.94e-18,167;UBERON:0000178,5.74e-10,15;UBERON:0000179,5.74e-10,15;UBERON:0000463,5.74e-10,15;UBERON:0000926,1.08e-08,315;UBERON:0004120,1.08e-08,315;UBERON:0006603,1.08e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,3.59143007015371,3.9408282935974,3.06972047123349,5.50709987588466,2.68680578668049,3.8704030829019,0,0,0,0.387336002901508,0.995184627411951,0,4.43196326825502,3.20871115952227,3.03815219002193,0.223915474239924,0.647787332037959,1.03030227053675,11.6318591023652,6.80176698639857,6.54976965207104,16.967319694115,5.75635043230556,6.19412741790207,3.16461631554365,2.81776777182011,1.6553756092201,8.27389633767885,2.5819387343353,6.77132432971709,14.6829024843232,8.73299680185107,6.51698104890745,8.57034898638527,4.49300637906531,4.47535988059329,3.95821560224059,3.78980949481101,2.55734850319616,11.0279510678862,6.80862269629368,4.9825779919646,4.52247597462138,2.60741459210101,1.73751075764093,4.84319602106695,5.15588690382591,4.43047342417238,2.11255286311942,3.18906449947565,3.35453832813401,2.02191536063691,4.35512989240368,2.4108838004562,1.71007646244749,1.19350006319454,1.82664153764634,0,0.546138611262131,2.66852776159066,0,0.400395987036012,0.574752439954483,0.661044872784862,0,1.70763890732835,1.17447437874188,0,0,1.12101712596307,0,0.590129310341499,0.393010762749165,1.23360899399706,0.167186495390678,0.32592226663359,0,1.94826728407911,0.779873198196215,0.294605907474837,0,0.270803863765016,0.512365278902701,0.520237390239513,0.986627427622057,1.10540007114339,0.579606171470105,0.296573126324121,0,0,1.35971211237079,0.766440987203842,0,1.01207876807801,0.637130828648193,0,0.950452044448374,0.752875595388864,0.639933055772092,1.24930726552346,0.473554504088034,0,1.81446068902259,1.87208137048455,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0.649094787309367,0.348259474598534,0.531831842075461,3.10037811596945,2.28797964312051,2.97166001063652,0.39752481473341,0,0.347140501607594,0.56530794192401,0,0.275118041940067,0,0,0,0.33472061276467,0,0,0.732186172644509,0.367663080345869,0,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,44.8053419282615,42.6558290563158,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0.492434012174795,0.234004265139238,1.18904929830983,0,0,0,0,0,0,1.97065295158377,8.54069809928293,16.5862492432618,7.78247748451592,15.6540617448711,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,2.00902836572851,2.10833939483032,0,0,0,0,0,0,0.112085143993527,0.985153801009636,1.07813787429759,1.02674429023799,0,0,0,0.335032530668698,0,17.9761685747324,11.966458368161,22.7928532389819,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,2.06768026122887,2.37285620900479,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0,0,0,0,0,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784306353074702,0,0,0,0.412164046590889,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,5.58192370155386,4.58782324285425,2.84823593587081,3.81170840732462,3.29089818468955,2.59389324477087,6.48037724685738,3.17250070517708,0,0,0,1.48642540100575,0,0.0711418433484141,0.159426272728822,0.399158742865633,0.766021480529467,1.90506224451495,0,0,4.33645890163065,2.19351854082233,0,2.20079311142084,5.94175877883688,2.82519590067467,0.851692475380653,1.03051603426729,0.307240764308458,0.223676107892416,0.166849141711909,3.71237381263877,0,1.23087398947712,0.811367035427949,0,0,0,0.146508179271894,0,0.222886768554957,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0.211125408127993,0.19924798825107,1.38141957765574,0,0,1.72318727645497,0,0,0,0,0.197286811273867,0,0,0,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,1.52581736317083,0.221158519862449,0.295547618953547,0.219385397153973,0,0,0.538651809526579,0,0.23056390438806,0.269272933229316,0.325942115766024,0,0.0915975934018623,0,0,0.627921025580099,0.831058409500782,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0.296521128680622,0.494255755786011,0.417687798021821,0.539209063845416,0,0,0.364909578431332,0,0,0,0,0.30607276163049,0.884612114798832,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0.225980740780532,0,0,0.189932387867636,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,6.38732940334862,0,1.8402114799552,0,0.229160424011684,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0.423366660328922,0.795229689809303,0.408610218334727,0,0,0,10.5737729029205,4.6428117273477,0.182248669974074,0,0.0788057072991982,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0.517131825446202,0.52893040697076,0,0,0.213574825135389,0,0.828478110694391,3.47316215268366,0.790446527591777,1.70509637733254,0,0,0,0,0,0,0.886068179966986,0,0.3755727921195,0,0.221858103073705,0.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| |||
|short_description=p@chr20:4803297..4803323,- | |||
}} |
Revision as of 10:03, 21 January 2014
Short description: | p@chr20:4803297..4803323, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:4803297..4803323, - |
Coexpression cluster: | C2621_migratory_Eosinophils_Neutrophils_CD14_hairy_immature_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.10e-68 | 98 |
blood island | 1.10e-68 | 98 |
hemolymphoid system | 1.35e-64 | 108 |
bone marrow | 4.10e-59 | 76 |
immune system | 1.53e-54 | 93 |
bone element | 1.60e-53 | 82 |
skeletal element | 3.16e-47 | 90 |
skeletal system | 8.85e-41 | 100 |
lateral plate mesoderm | 1.43e-23 | 203 |
connective tissue | 1.74e-20 | 371 |
musculoskeletal system | 8.94e-18 | 167 |
blood | 5.74e-10 | 15 |
haemolymphatic fluid | 5.74e-10 | 15 |
organism substance | 5.74e-10 | 15 |
mesoderm | 1.08e-08 | 315 |
mesoderm-derived structure | 1.08e-08 | 315 |
presumptive mesoderm | 1.08e-08 | 315 |