FFCP PHASE1:Hg19::chr3:45266600..45266635,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25907 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=30293 | |||
|TSSclassifier=weak | |||
|UniProt=Q8WZ71 | |||
|association_with_transcript=433bp_to_AL080235_5end | |||
|coexpression_cluster_id=C4330 | |||
|description=CAGE_peak_2_at_TMEM158_5end | |||
|id=chr3:45266600..45266635,- | |||
|ontology_enrichment_celltype=CL:0000393!1.16e-18!60;CL:0000211!1.16e-18!60;CL:0000055!4.37e-18!180;CL:0000680!1.43e-17!57;CL:0000056!1.43e-17!57;CL:0000355!1.43e-17!57;CL:0000187!2.38e-16!54;CL:0000192!1.66e-14!42;CL:0000514!1.66e-14!42;CL:0000183!1.92e-14!59;CL:0000359!4.42e-11!32;CL:0002539!7.72e-08!10;CL:0002321!1.05e-07!248;CL:0000220!2.44e-07!246;CL:0000222!8.07e-07!119;CL:0000034!8.43e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.31e-17;32!CL:0002539;3.11e-16;10!CL:0000192;9.95e-16;43!CL:0002595;2.13e-14;5!CL:0000723;8.18e-11;61!CL:0000187;5.84e-10;55!CL:0000048;2.12e-09;58!CL:0000393;4.79e-09;61!CL:0000211;4.79e-09;61!CL:0002582;5.09e-09;3!CL:0000346;7.91e-09;3!CL:1000428;7.91e-09;3!CL:0000134;1.46e-08;55!CL:0000034;4.83e-08;69!CL:0002593;4.41e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.55e-19,43;CL:0000514,1.55e-19,43;CL:0000393,1.51e-18,61;CL:0000211,1.51e-18,61;CL:0000359,1.11e-17,32;CL:0000187,1.51e-17,55;CL:0000680,2.48e-16,58;CL:0000056,2.48e-16,58;CL:0000355,2.48e-16,58;CL:0002539,4.10e-16,10;CL:0002595,2.86e-14,5;CL:0000048,1.85e-11,427;CL:0000723,4.35e-11,433;CL:0000034,1.32e-10,441;CL:0002582,5.05e-09,3;CL:0000346,8.16e-09,3;CL:1000428,8.16e-09,3;CL:0002593,4.49e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000514;9.95e-16;43!CL:0000355;1.08e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!1.30e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.58e-14;14!DOID:0060072;6.87e-12;4!DOID:0060084;7.16e-10;3!DOID:127;7.16e-10;3!DOID:120;5.13e-08;27!DOID:193;2.54e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.00e-14,14;DOID:0060072,4.85e-12,4;DOID:0060084,7.10e-10,3;DOID:127,7.10e-10,3;DOID:120,4.88e-08,27;DOID:193,2.42e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0004290!7.02e-20!70;UBERON:0000914!1.08e-18!83;UBERON:0002329!1.08e-18!83;UBERON:0003077!1.08e-18!83;UBERON:0003059!1.08e-18!83;UBERON:0007282!1.08e-18!83;UBERON:0009618!1.08e-18!83;UBERON:0007285!1.08e-18!83;UBERON:0000486!1.19e-16!82;UBERON:0001134!2.35e-15!61;UBERON:0002036!2.35e-15!61;UBERON:0003082!2.35e-15!61;UBERON:0002385!2.29e-14!63;UBERON:0001015!2.29e-14!63;UBERON:0000383!2.29e-14!63;UBERON:0005256!7.07e-12!143;UBERON:0001637!1.30e-10!42;UBERON:0003509!1.30e-10!42;UBERON:0004572!1.30e-10!42;UBERON:0004573!2.07e-10!33;UBERON:0004571!2.07e-10!33;UBERON:0002100!2.23e-08!216;UBERON:0004237!7.72e-08!10;UBERON:0004695!7.72e-08!10;UBERON:0002111!7.72e-08!10;UBERON:0004178!7.72e-08!10;UBERON:0001135!1.85e-07!15;UBERON:0000475!5.60e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.38e-18;33!UBERON:0004571;5.38e-18;33!UBERON:0004237;3.11e-16;10!UBERON:0004695;3.11e-16;10!UBERON:0002111;3.11e-16;10!UBERON:0004178;3.11e-16;10!UBERON:0003834;2.13e-14;5!UBERON:0001533;2.13e-14;5!UBERON:0001135;2.58e-10;15!UBERON:0001637;3.66e-10;42!UBERON:0003509;3.66e-10;42!UBERON:0004572;3.66e-10;42!UBERON:0003513;3.78e-10;7!UBERON:0000412;7.91e-09;3!UBERON:0001992;7.91e-09;3!UBERON:0000947;1.11e-08;21!UBERON:0010191;1.11e-08;21!UBERON:0002067;1.68e-07;9!UBERON:0002456;4.41e-07;2!UBERON:0000992;4.94e-07;13!UBERON:0000991;8.26e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,4.62e-21,73;UBERON:0002329,3.52e-20,71;UBERON:0003059,3.52e-20,71;UBERON:0007282,3.52e-20,71;UBERON:0004290,3.52e-20,71;UBERON:0009618,3.52e-20,71;UBERON:0003077,8.52e-20,72;UBERON:0007285,8.52e-20,72;UBERON:0004573,2.58e-19,33;UBERON:0004571,2.58e-19,33;UBERON:0007503,1.06e-17,78;UBERON:0000486,3.43e-16,83;UBERON:0004237,4.10e-16,10;UBERON:0004695,4.10e-16,10;UBERON:0002111,4.10e-16,10;UBERON:0004178,4.10e-16,10;UBERON:0001134,6.73e-15,62;UBERON:0002036,6.73e-15,62;UBERON:0003082,6.73e-15,62;UBERON:0003834,2.86e-14,5;UBERON:0001533,2.86e-14,5;UBERON:0002385,2.99e-14,64;UBERON:0001015,2.99e-14,64;UBERON:0000383,2.99e-14,64;UBERON:0001637,3.31e-14,42;UBERON:0003509,3.31e-14,42;UBERON:0004572,3.31e-14,42;UBERON:0005256,1.83e-13,122;UBERON:0000926,2.76e-10,315;UBERON:0004120,2.76e-10,315;UBERON:0006603,2.76e-10,315;UBERON:0001135,3.07e-10,15;UBERON:0003513,4.63e-10,7;UBERON:0000490,9.96e-10,148;UBERON:0003104,4.03e-09,160;UBERON:0009142,4.03e-09,160;UBERON:0007500,6.96e-09,59;UBERON:0001981,6.96e-09,59;UBERON:0004537,6.96e-09,59;UBERON:0006965,6.96e-09,59;UBERON:0000412,8.16e-09,3;UBERON:0001992,8.16e-09,3;UBERON:0005156,9.24e-09,59;UBERON:0000990,9.24e-09,59;UBERON:0004872,1.03e-08,83;UBERON:0000947,1.14e-08,21;UBERON:0010191,1.14e-08,21;UBERON:0002067,1.53e-07,9;UBERON:0004016,1.53e-07,9;UBERON:0010083,1.53e-07,9;UBERON:0000055,3.51e-07,68;UBERON:0000992,4.36e-07,13;UBERON:0002456,4.49e-07,2;UBERON:0002100,5.65e-07,199;UBERON:0000991,7.31e-07,21;UBERON:0009196,7.31e-07,21;UBERON:0009117,7.31e-07,21;UBERON:0005564,7.31e-07,21;UBERON:0003134,9.23e-07,37;UBERON:0000474,9.23e-07,37;UBERON:0002119,9.27e-07,4 | |||
|phase1_expression=0.363356758541113,0.642301571672949,1.26858963686374,0,0.446961094427288,0,0,1.89515962028049,0.522371256399677,0.491467873003018,0,0,0,0.123766352960047,0,5.3786011716142,2.41077811209591,2.92124036154949,0.975865597581014,0.123121058076788,0,0.313454721478088,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0.426224750532694,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.289693037921647,0,0,0.0945348171640679,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0.366403487860815,0,0,0,0,0.633152558322899,0.264818361626438,0.573673241497627,1.77334191099179,0,0,0.49333509683432,0.311211035399766,0.134710672069688,0,0.151357427644931,0,0,8.42832207441865,0.570471821544449,2.83952493048422,0.469737994575059,0,0.421352420106746,0.204154171254893,0.122834317311768,0,0,0.741800787835671,0,0,0.336672227908132,0,0,0,0,0.751190294532984,0,0,0,0.211931901159562,0,0.618315175430633,0,0.37223371266318,0,0.0974370051611986,0,0,0,0,0.403008392910561,0,0,0,0.286804595389004,0.365921118388786,0.132529768321485,0.348581828608555,0.310983165046111,0.252320850875628,0,6.25798129319264,3.21620469096443,1.38134921352481,0,0.721879481669586,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0.383382679165211,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0.205654985406647,0,0,0,0,0,0.258543431515556,14.3062578340753,0,0.531876233169741,0,0.257207374262142,1.41849132023278,0,0.142977993658148,0,0,0,0,0,0,0.871533458600294,0.299918973546171,0,0,0,0,0,1.42636905040718,0.434343920002738,0.410952645100767,0.179060963239896,0,0,0,0,1.52456774533478,2.60279707715243,1.54657762555539,0.502548796003046,1.91381625495949,0.749007023947182,0,0.414415513436035,0,0,0,0.207970861530807,0.356857977594324,0,0.35142424497814,0.601892199455438,2.27407504055985,0,0,0.368738337083406,1.39013783148933,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0.482561763430822,0,2.00472601943452,4.97172830876756,2.62806899244189,6.23105315020345,2.20799719073923,0,0.802025881213139,0.184161977871793,1.03333003348146,0.728364672026868,1.83574180943194,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0,0,0,0,0,1.6068392984416,5.7035723792352,0.308097234229289,0.307007349452259,0,0.107420244868274,0.290033387828457,0.170453254832202,0.445160178233687,0.330569830721956,0,0,0,6.04299214086472,2.20368642781448,0,2.15623506123262,1.06461206063404,2.60979897622522,6.67167188774112,0,0,0,0,1.02359116524534,0,1.27281299170375,0.78494864019923,0.179872457583315,0.823611089208164,0.824686816419805,0.404364963146632,0,1.26377536871694,0,12.1856744815642,13.7345190783782,1.09199929126389,2.82810863907426,0,1.10273068709225,7.96126770289464,6.57676327880644,0.578775534266688,0,0.608731130888112,0.92947049429925,0.845086807596724,0,0,0.35667105148125,2.83808851256478,0.422215270595328,0,0.379473173765715,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0.19538809540204,0.278406173895242,0,0,0,0,0,0,0,0,0.284136146806413,0,0.296964680832639,0,0,0,1.8922479853894,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.295930216910801,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.723578631752448,0,0,0,0,0,0,0.153900517007594,0.683652335082007,0,0.0897576444097721,0,0,1.74035427463538,0,0,0,0,0,0.19606253431774,0.839107934879214,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0,0.728341138602278,0,0,0.61214552326098,0,0.300646838828985,0.207376382794494,1.32930774541437,0,0.627865836814451,0,0,1.10939738410511,0,0,0.0870592065804026,0,1.20390222730132,0,0,0,0.193978032976839,0.353024506766001,0.225980740780532,1.78154502040776,1.78843150532691,0,0,0,0.426905989478705,0.39961921916426,0,0,0,0.14405479798815,0,0,0,0,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0.0787831823072236,0,0,0,0,0.795229689809303,0,0.643012593860077,0.412618309791701,0,0,0,0.182248669974074,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,36.3809733174987,12.963322368019,26.1269888087527,0,0,1.02232813071253,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0.366078794705889,0.1251909307065,0,0.221858103073705,0,0,0,0.151649117541648,1.42732666772484,0.470531639396343,0,0,0.447764408660622,0,0,2.08343305802598,1.0062716070103,0.889811221596536,2.74608082076308,2.11723293268535,0.15543720058278,2.06997209985487,1.59296767163702,5.39763734596325,0.931577741257556,4.97647449409027,1.59505028734797,4.17396049449387,0.901545653983311,6.09288339470073,0.406870733204662,4.54621648006399,0.859284456339908,2.78420255927096,3.18476710958893,0.800055529326307,0,0,0,0.385239660814607,0,0,0,0,0.244736704506468,0.358177682162975,0,0.219284049578707,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,1.84105950251841,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,1.41070377476274,0,0.0642292250964595,0,0.319267718114302,0,0.252071696221718,0,0.322951291263702,0,0.0981477185010256,0,0,0,0,0.690359926060101,0,0.150420656698515,0.80682027481408,0,0,0,0,0.135075169236789,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,1.37190407549935,0,0,0,0.111231401892069,0.078493092850514,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0.946656005844523,1.10777426186905,1.27016115057279,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.135982980381829,0.436350690340377,0,0,0.462175628631418,0.432626562123789,0,0,0.126698501011437,0,0.26721740526556,0.0918948995348449,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0.332660356546013,0,0.426909383510862,3.8614456457388,0.179650404213174,0,0.855690109280065,2.03448089157869,0,0,0 | |||
|short_description=p2@TMEM158 | |||
}} |
Revision as of 18:33, 21 January 2014
Short description: | p2@TMEM158 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TMEM158_5end |
Coexpression cluster: | C4330_leiomyoma_Smooth_Fibroblast_Preadipocyte_Mesenchymal_mesenchymal_Adipocyte |
Association with transcript: | 433bp_to_AL080235_5end |
EntrezGene: | TMEM158 |
HGNC: | 30293 |
UniProt: | Q8WZ71 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.55e-19 | 43 |
smooth muscle myoblast | 1.55e-19 | 43 |
electrically responsive cell | 1.51e-18 | 61 |
electrically active cell | 1.51e-18 | 61 |
vascular associated smooth muscle cell | 1.11e-17 | 32 |
muscle cell | 1.51e-17 | 55 |
muscle precursor cell | 2.48e-16 | 58 |
myoblast | 2.48e-16 | 58 |
multi-potent skeletal muscle stem cell | 2.48e-16 | 58 |
aortic smooth muscle cell | 4.10e-16 | 10 |
smooth muscle cell of the subclavian artery | 2.86e-14 | 5 |
multi fate stem cell | 1.85e-11 | 427 |
somatic stem cell | 4.35e-11 | 433 |
stem cell | 1.32e-10 | 441 |
visceral preadipocyte | 5.05e-09 | 3 |
hair follicle dermal papilla cell | 8.16e-09 | 3 |
stem cell of epidermis | 8.16e-09 | 3 |
smooth muscle cell of the internal thoracic artery | 4.49e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.00e-14 | 14 |
benign neoplasm | 4.85e-12 | 4 |
cell type benign neoplasm | 7.10e-10 | 3 |
leiomyoma | 7.10e-10 | 3 |
female reproductive organ cancer | 4.88e-08 | 27 |
reproductive organ cancer | 2.42e-07 | 29 |