FFCP PHASE1:Hg19::chr5:57787278..57787351,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=202309 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26588 | |||
|TSSclassifier=weak | |||
|UniProt=Q8N292 | |||
|association_with_transcript=0bp_to_ENST00000513924,ENST00000515443,NM_152687,uc003jro.1_5end | |||
|coexpression_cluster_id=C1963 | |||
|description=CAGE_peak_1_at_GAPT_5end | |||
|id=chr5:57787278..57787351,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.83e-70!172;CL:0000566!2.83e-70!172;CL:0002032!1.28e-65!165;CL:0000837!1.28e-65!165;CL:0000763!5.82e-64!112;CL:0000049!5.82e-64!112;CL:0000988!1.20e-63!182;CL:0000738!1.27e-54!140;CL:0000766!2.26e-48!76;CL:0002031!1.71e-43!124;CL:0000557!2.12e-43!71;CL:0000839!1.19e-42!70;CL:0002087!1.20e-39!119;CL:0002009!1.73e-38!65;CL:0002057!5.20e-38!42;CL:0002194!4.14e-37!63;CL:0000576!4.14e-37!63;CL:0000040!4.14e-37!63;CL:0000559!4.14e-37!63;CL:0000860!3.32e-34!45;CL:0000134!6.26e-12!358;CL:0000236!2.77e-11!14;CL:0002320!5.29e-11!365;CL:0000945!8.03e-11!24;CL:0000826!8.03e-11!24;CL:0002393!3.35e-08!9;CL:0002397!3.35e-08!9;CL:0000094!4.07e-08!8;CL:0000219!6.75e-08!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.73e-36;33!CL:0002057;1.73e-36;33!CL:0000576;1.32e-34;48!CL:0000473;3.23e-32;39!CL:0000234;3.23e-32;39!CL:0000766;3.11e-30;69!CL:0000763;3.17e-27;100!CL:0000738;1.27e-14;136!CL:0002087;2.13e-14;104!CL:0000236;3.47e-14;13!CL:0000988;3.25e-13;177!CL:0000094;4.05e-10;8!CL:0000945;4.23e-08;24!CL:0002393;5.90e-07;6!CL:0002397;5.90e-07;6!CL:0000097;7.36e-07;5!CL:0000081;7.96e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,3.83e-87,108;CL:0000049,3.83e-87,108;CL:0000037,5.24e-85,168;CL:0002032,6.72e-79,161;CL:0000837,6.72e-79,161;CL:0000988,9.44e-79,177;CL:0000766,1.48e-67,72;CL:0000738,6.64e-64,136;CL:0000557,6.55e-61,67;CL:0000839,6.34e-60,66;CL:0002009,2.19e-54,61;CL:0002194,1.43e-52,59;CL:0000576,1.43e-52,59;CL:0000040,1.43e-52,59;CL:0000559,1.43e-52,59;CL:0000473,1.55e-51,48;CL:0000234,1.55e-51,48;CL:0002031,8.21e-51,120;CL:0000860,3.91e-49,42;CL:0002057,3.91e-49,42;CL:0002087,6.17e-46,115;CL:0000134,1.04e-21,354;CL:0002320,1.28e-20,361;CL:0000219,8.07e-17,386;CL:0000236,7.12e-13,14;CL:0000034,2.51e-12,441;CL:0000048,2.61e-12,427;CL:0000723,1.05e-11,433;CL:0002393,3.24e-10,9;CL:0002397,3.24e-10,9;CL:0000094,4.19e-10,8;CL:0000945,4.16e-08,24;CL:0000826,4.16e-08,24;CL:0000097,7.24e-07,5;CL:0002028,7.24e-07,5;CL:0000081,8.14e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.69e-35;42!CL:0000049;5.74e-24;108 | |||
|ontology_enrichment_disease=DOID:8692!3.94e-13!31;DOID:1240!9.99e-10!39;DOID:2531!3.28e-08!51;DOID:0060083!3.28e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;9.69e-17;31!DOID:1240;2.45e-11;39!DOID:2531;2.85e-07;51!DOID:0060083;2.85e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.20e-17,31;DOID:1240,9.39e-14,39;DOID:2531,2.33e-11,51;DOID:0060083,2.33e-11,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.52e-44!102;UBERON:0003061!1.52e-44!102;UBERON:0002193!2.67e-40!112;UBERON:0002371!3.10e-37!80;UBERON:0001474!7.76e-33!86;UBERON:0007023!5.20e-27!115;UBERON:0002405!1.67e-25!115;UBERON:0004765!3.83e-25!101;UBERON:0001434!3.83e-25!101;UBERON:0003081!2.11e-11!216;UBERON:0002384!4.49e-10!375;UBERON:0001049!1.78e-08!57;UBERON:0005068!1.78e-08!57;UBERON:0006241!1.78e-08!57;UBERON:0007135!1.78e-08!57;UBERON:0002204!5.41e-08!167;UBERON:0000178!1.04e-07!15;UBERON:0000179!1.04e-07!15;UBERON:0000463!1.04e-07!15;UBERON:0000479!1.61e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.06e-10;15!UBERON:0000179;5.06e-10;15!UBERON:0000463;5.06e-10;15!UBERON:0002390;3.14e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.65e-63,98;UBERON:0003061,1.65e-63,98;UBERON:0002193,1.88e-58,108;UBERON:0002371,3.16e-53,76;UBERON:0002405,1.67e-48,93;UBERON:0001474,1.04e-47,82;UBERON:0004765,1.64e-41,90;UBERON:0001434,3.42e-35,100;UBERON:0002384,3.88e-19,371;UBERON:0003081,7.73e-19,203;UBERON:0002204,3.99e-13,167;UBERON:0000178,5.00e-10,15;UBERON:0000179,5.00e-10,15;UBERON:0000463,5.00e-10,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.328402357799783,0.157421562627358,6.68719270643137,7.67658796194425,7.43117391917165,0,0,0,10.7679408806619,1.70603078984906,37.2872557955256,12.7418943962332,7.82123345133553,3.03815219002193,5.59788685599811,1.29557466407592,8.49999373192816,101.051775951797,44.9672372989683,52.6407412777561,71.5881433669509,21.7918980651568,23.5376841880279,46.8938599485105,54.8183911972275,64.7961309894723,16.8925383560943,13.5551783552603,14.8969135253776,60.2375486536335,41.7546409588504,80.0015604624501,37.3422348692501,24.3906060577831,14.0654167675789,103.903159558816,77.5913628148148,66.0648363325676,51.3670352372594,38.0148100543064,47.3344909236637,26.381109851958,33.8963896973131,50.8221896609973,47.2211612054028,45.666426862458,62.3430903258542,27.8856977931763,26.3629331956654,23.2721096514297,48.0766541306999,48.5071363878065,73.1301419471715,25.6511469367124,38.9876687310217,42.1954195196304,86.2381597860481,91.205148080776,88.0614161324919,88.333156071267,102.901768668255,81.6148464735366,83.9526988436775,81.0945691355059,29.5990743936913,18.2043528704991,18.7313881781362,6.60856642895129,1.12101712596307,33.9765469359849,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802622484269139,0,0,0,0,0,0.95569624297229,0,0,1.80690142893327,1.15187950038977,2.49861453104692,3.78843603270427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,84.1871903797857,126.410875282408,34.5455476236495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.3560834872127,46.533631697799,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72351904261178,0.702012795417713,1.0404181360211,0,0,0,0,0,0,42.3690384590511,33.5464533590391,25.2940300959742,30.2651902175619,23.607335050733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9461402577071,16.072226925828,14.7583757638122,0,0,0,0,0,0,0,0.985153801009636,0,0.513372145118994,0,0,0,0,0,65.912618107352,95.731666945288,103.189462845573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.8872978808479,11.0014242417495,6.29692591040322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.48149691614836,4.70583811844821,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,1.03558180854457,0,0,0,0,26.3872756800728,28.2915766642679,34.7484784176239,40.2611700523663,37.4339668508437,22.0480925805524,27.0015718619057,27.7593811702995,0,0,0,19.8809397384519,0,0,0,25.1470008005349,9.00075239622124,26.2475242577615,28.5667307441609,42.1195767170188,29.670508274315,27.5756616560521,30.0761372508081,41.9843608947976,15.4164552099552,36.1221475871975,34.0676990152261,12.3661924112075,57.4540229256816,54.1296181099646,63.903221275661,37.7099024125938,0,2.46174797895425,14.8750623161791,0,5.63948020351398,0,0.293016358543788,0,0,0,0,0.296964680832639,0,0,0.984685914873589,0,0,0,0.398495976502139,8.28851746593443,0,0,0.123084805461069,0,0,0,0,1.38100767891707,16.7638164642858,0,0,0.927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.60298219312704,0,0.221158519862449,0.591095237907095,0.438770794307945,0,0,1.15425387755696,0,0,0,0,0,0,0,0,8.63391410172636,5.98362054840563,0,0,0,0,16.5294042139594,0,0,0,0,0,0.442287822516696,1.83309043480088,0,0,0,0.943615861729479,0,0.702793337176017,1.27718352450966,0,0,0.394584402849391,1.20990716048664,0.91821828489147,2.02197054811161,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,1.84279131327997,0,0.90392296312213,0,0,0.379864775735272,0,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,1.50595916781192,3.83239764200917,0,0,0.558564802544508,0.229160424011684,0,0,0,0,0.53746777989381,0,0,0,0,0,0,0,1.59045937961861,1.0896272488926,0,0,0,11.0237206860235,7.7380195455795,0.242998226632099,0,0.86686278029118,0.157363764404994,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,3.20160830922422,0,0,0.293104467356165,0,0.775697738169303,2.11572162788304,0,0,2.13574825135389,0.314408610199332,5.38510771951354,12.9003165671107,0,0.974340787047167,0,0,0,0,0,0,0,0,1.001527445652,2.29363678276028,3.43880059764242,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,1.16916185303633,0.531459361253452,2.78061170234935,0,0,0,0,15.3636090759563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,0,0.957803154342908,0.41023272848151,0,0.0691572524642179,0.807378228159255,1.42769420259154,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.253663240775627,0.546974809018219,0,0.992422356778588,0,0,0.535701835878287,2.35398605553177,0,0.227662191351298,0.532214220975833,0.460935950223117,0,1.15548546060614,0.131545547125698,0,0,1.33438257845874,0.314231179832004,0,0.9131587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| |||
|short_description=p1@GAPT | |||
}} |
Revision as of 05:31, 22 January 2014
Short description: | p1@GAPT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GAPT_5end |
Coexpression cluster: | C1963_acute_CD14_Neutrophils_Dendritic_CD19_Eosinophils_CD34 |
Association with transcript: | 0bp_to_ENST00000513924, ENST00000515443, NM_152687, uc003jro.1_5end |
EntrezGene: | GAPT |
HGNC: | 26588 |
UniProt: | Q8N292 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.65e-63 | 98 |
blood island | 1.65e-63 | 98 |
hemolymphoid system | 1.88e-58 | 108 |
bone marrow | 3.16e-53 | 76 |
immune system | 1.67e-48 | 93 |
bone element | 1.04e-47 | 82 |
skeletal element | 1.64e-41 | 90 |
skeletal system | 3.42e-35 | 100 |
connective tissue | 3.88e-19 | 371 |
lateral plate mesoderm | 7.73e-19 | 203 |
musculoskeletal system | 3.99e-13 | 167 |
blood | 5.00e-10 | 15 |
haemolymphatic fluid | 5.00e-10 | 15 |
organism substance | 5.00e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.20e-17 | 31 |
leukemia | 9.39e-14 | 39 |
hematologic cancer | 2.33e-11 | 51 |
immune system cancer | 2.33e-11 | 51 |