FFCP PHASE1:Hg19::chr6:1389871..1389876,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2295 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3810 | |||
|TSSclassifier=strong | |||
|UniProt=Q12947 | |||
|association_with_transcript=-192bp_to_ENST00000259806,NM_001452,uc003mtm.2,uc003mtn.2_5end | |||
|coexpression_cluster_id=C2845 | |||
|description=CAGE_peak_4_at_FOXF2_5end | |||
|id=chr6:1389871..1389876,+ | |||
|ontology_enrichment_celltype=CL:0000057!3.32e-15!75;CL:0000055!5.97e-12!180;CL:0002556!1.77e-08!6;CL:0002552!1.85e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002556;7.81e-33;6!CL:0002552;5.26e-28;5!CL:0002600;1.66e-12;2!CL:0002549;6.15e-12;2!CL:0000057;1.84e-08;73!CL:0000708;5.43e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002556,1.19e-32,6;CL:0002552,4.61e-28,5;CL:0000057,4.06e-13,76;CL:0002600,1.71e-12,2;CL:0002549,8.58e-12,2;CL:0000708,7.49e-08,3;CL:0002599,7.82e-07,1;CL:0002581,9.79e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!2.98e-09!95;UBERON:0001758!1.77e-08!6;UBERON:0003672!1.77e-08!6;UBERON:0001444!1.82e-07!48;UBERON:0000033!3.40e-07!123;UBERON:0000165!3.89e-07!28;UBERON:0000930!3.89e-07!28;UBERON:0000153!9.56e-07!129;UBERON:0007811!9.56e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001758;7.81e-33;6!UBERON:0003672;7.81e-33;6!UBERON:0003129;4.47e-28;7!UBERON:0011137;1.04e-23;11!UBERON:0010323;1.04e-23;11!UBERON:0000165;5.90e-22;28!UBERON:0001828;1.94e-17;8!UBERON:0000075;4.98e-16;16!UBERON:0001444;1.85e-14;48!UBERON:0000033;2.61e-13;50!UBERON:0007811;3.60e-13;52!UBERON:0005629;6.15e-12;2!UBERON:0005358;6.15e-12;2!UBERON:0001886;6.15e-12;2!UBERON:0004086;6.15e-12;2!UBERON:0005282;6.15e-12;2!UBERON:0005281;6.15e-12;2!UBERON:0001555;3.71e-11;54!UBERON:0003729;1.22e-10;13!UBERON:0000153;3.39e-10;54!UBERON:0000344;1.23e-09;20!UBERON:0003210;5.43e-08;3!UBERON:0000161;3.44e-07;19!UBERON:0000166;3.44e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001758,1.19e-32,6;UBERON:0003672,1.19e-32,6;UBERON:0003129,6.41e-28,7;UBERON:0000165,4.14e-25,29;UBERON:0000930,4.14e-25,29;UBERON:0010323,1.16e-23,11;UBERON:0001444,3.92e-19,49;UBERON:0000033,6.92e-19,56;UBERON:0011137,2.08e-18,14;UBERON:0001828,1.79e-17,8;UBERON:0000153,9.53e-17,62;UBERON:0007811,9.53e-17,62;UBERON:0000075,5.36e-16,16;UBERON:0005629,8.58e-12,2;UBERON:0005358,8.58e-12,2;UBERON:0001886,8.58e-12,2;UBERON:0004086,8.58e-12,2;UBERON:0005282,8.58e-12,2;UBERON:0005281,8.58e-12,2;UBERON:0003102,9.28e-11,99;UBERON:0003729,1.16e-10,13;UBERON:0000344,1.20e-09,20;UBERON:0004119,2.40e-09,160;UBERON:0000925,2.40e-09,160;UBERON:0006595,2.40e-09,160;UBERON:0000166,1.33e-08,22;UBERON:0001007,2.27e-08,145;UBERON:0001555,2.27e-08,145;UBERON:0007026,2.27e-08,145;UBERON:0003210,7.49e-08,3 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0.495065411840187,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,2.00535164254356,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0.560677600142307,0,0,0,0,0,1.05950199351452,2.30470369792,0,0.312160076830321,0,0.448346041655403,0,0,0,1.02077085627447,2.82518929817066,4.44300859055791,2.37600571456411,2.96720315134268,0,0.718618141816238,1.17835279767846,2.62748891731125,1.10825646193673,3.95079858792754,2.14541457059314,2.10333282469236,0,0.358779271377724,0.427114777637135,0.211931901159562,0.300091096084402,0.103052529238439,0,0,0,0.0974370051611986,0.252433774244115,0.0920498986422993,0.323292113637624,0,0.10075209822764,0.847802961552438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.337169380156203,0.241011029883482,0.330881918197182,0.871517776369625,0.474541238222193,0.269662616320329,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28065813717227,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0.381988425558278,0,0,0.205654985406647,0,0,1.12131084345361,0.87192013766656,1.0267360014933,0,0,0,0,0,0,0,0,0.714889968290738,0,0,0,0,0,0,0,0,0,0,0,0.718874566474748,4.59447743336456,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0.500170521059677,0,0,0.178428988797162,0.946214490203608,0,0,0,1.03473071292505,0,0,0.868836144680828,0.391602314925481,2.40200396667599,0,0,0,0,1.66435439510497,0,0.496215615637554,0.153461973288062,0,0.640695746278505,0,0,1.48418066444991,0.154209693802656,0,0.328508624055237,0.519254429183621,0.232420756919918,0,0,0,0.459257792658427,0,1.57349297951309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0.27470839445503,0.165018999841176,0,0,0,0,0,0,0,0.214840489736547,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0.511795582622668,1.28381696410176,0,0,0,0.274537029736055,0.117812402345686,0,0,0,1.95053495635836,0,0,0,0.141405431953713,1.13008116620243,0,0,0.438450885253763,2.31510213706675,3.9353685122798,0,0,0,0,0,0,0,0.211107635297664,0,0.75894634753143,0.349934720244983,0,0,0,0.376575203107117,0.86101074534246,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0.306806047506464,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0.435753854075961,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0.995261931078505,0.530745387020035,0,0,0.494255755786011,0.313265848516366,0.134802265961354,0,0,0,0,0,0,0,0,0,0.150323419414493,0.622129148383483,0,0,0.313932918407225,0,0,0,0.173559738335131,0.391969589657511,0.0870592065804026,0,0,0.580537987734511,0.511625219603299,0.410577285266046,0.290967049465258,0,0,0.548167698587004,0.397429223405979,0.0633107959558787,0,0,0,0,0,0,0,0,0.124252535565433,0.235694034616795,0,0,1.01998217636322,0.577901179803038,0,0.136905378891993,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,1.34173875039706,0.0788057072991982,0,0,0.717149357331379,0.767660789277781,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0.171086837884329,0,0.427149650270779,0,0,0,0,0,0,0,0,0,0,0.628216385000937,0,0,0,0,0,0.18628920882415,0.276697269872462,0.124980407962107,0.303298235083296,0,0,0,0,0.298509605773748,0,0,0,0,0,0,0.302461847526478,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0.686791410365586,0.336749488765919,0,0,0.214441591374926,0.260994291965212,1.58694147858591,0,0,0,0,0.438568099157414,0.176689145945881,0,0,0,0.345430341731199,1.21543982470953,0.138258436151731,0,0,0,0.327609848846413,0.491545817507439,0,0.19998739585493,0,0,0,0.920529751259204,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0.0788617450012534,0,1.41070377476274,3.3687002508852,0,0,0.159633859057151,0,0,0.138314504928436,0.161475645631851,0,0.196295437002051,0.11796972334774,0,0.115525666150338,0.381382095467167,0,0,0,0.20170506870352,0,0,0,0,0.270150338473579,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.177404740325278,0,0,0.135939465953663,0.0657727735628491,0,0,0.235479278551542,0.157115589916002,0,0,0,0,1.28657779517981,0.158013611732727,0,0,2.40513409419076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0.485710993059139,0,0,0,0.11294608203896,0,0,0.308696632431779,0.655678681511872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.946629373159108,0.0679914901909147,0,0,0.743990036333503,0,0,0,0,0,0,0,0.275684698604535,0,0.0757786982182394,0,0,0.103432995861895,0.213233981900981,0,0,0,0.112131862580613,0,0.202117188958219,0,0.6844666021705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| |||
|short_description=p4@FOXF2 | |||
}} |
Revision as of 09:36, 22 January 2014
Short description: | p4@FOXF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FOXF2_5end |
Coexpression cluster: | C2845_Fibroblast_retina_normal_colon_Smooth_rectum_synovial |
Association with transcript: | -192bp_to_ENST00000259806, NM_001452, uc003mtm.2, uc003mtn.2_5end |
EntrezGene: | FOXF2 |
HGNC: | 3810 |
UniProt: | Q12947 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of periodontium | 1.19e-32 | 6 |
fibroblast of gingiva | 4.61e-28 | 5 |
fibroblast | 4.06e-13 | 76 |
smooth muscle cell of trachea | 1.71e-12 | 2 |
fibroblast of choroid plexus | 8.58e-12 | 2 |
leptomeningeal cell | 7.49e-08 | 3 |
smooth muscle cell of the esophagus | 7.82e-07 | 1 |
perirenal preadipocyte | 9.79e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
periodontium | 1.19e-32 | 6 |
dentition | 1.19e-32 | 6 |
skull | 6.41e-28 | 7 |
mouth | 4.14e-25 | 29 |
stomodeum | 4.14e-25 | 29 |
cranial skeletal system | 1.16e-23 | 11 |
subdivision of head | 3.92e-19 | 49 |
head | 6.92e-19 | 56 |
axial skeletal system | 2.08e-18 | 14 |
gingiva | 1.79e-17 | 8 |
anterior region of body | 9.53e-17 | 62 |
craniocervical region | 9.53e-17 | 62 |
subdivision of skeletal system | 5.36e-16 | 16 |
vascular plexus | 8.58e-12 | 2 |
ventricle of nervous system | 8.58e-12 | 2 |
choroid plexus | 8.58e-12 | 2 |
brain ventricle | 8.58e-12 | 2 |
ventricular system of brain | 8.58e-12 | 2 |
ventricular system of central nervous system | 8.58e-12 | 2 |
surface structure | 9.28e-11 | 99 |
mouth mucosa | 1.16e-10 | 13 |
mucosa | 1.20e-09 | 20 |
endoderm-derived structure | 2.40e-09 | 160 |
endoderm | 2.40e-09 | 160 |
presumptive endoderm | 2.40e-09 | 160 |
oral opening | 1.33e-08 | 22 |
digestive system | 2.27e-08 | 145 |
digestive tract | 2.27e-08 | 145 |
primitive gut | 2.27e-08 | 145 |
blood-cerebrospinal fluid barrier | 7.49e-08 | 3 |