FFCP PHASE1:Hg19::chr6:24666953..24666974,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51567 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17768 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=39bp_to_ENST00000480495_5end | |||
|description=CAGE_peak_5_at_TDP2_5end | |||
|id=chr6:24666953..24666974,- | |||
|ontology_enrichment_celltype=CL:0000037!1.06e-34!172;CL:0000566!1.06e-34!172;CL:0000738!6.33e-34!140;CL:0000988!1.54e-32!182;CL:0002032!7.39e-32!165;CL:0000837!7.39e-32!165;CL:0002087!4.92e-27!119;CL:0002031!4.30e-26!124;CL:0000763!1.35e-22!112;CL:0000049!1.35e-22!112;CL:0000766!1.47e-21!76;CL:0002009!9.47e-19!65;CL:0002194!7.89e-18!63;CL:0000576!7.89e-18!63;CL:0000040!7.89e-18!63;CL:0000559!7.89e-18!63;CL:0000557!1.26e-17!71;CL:0000839!8.68e-17!70;CL:0000860!1.08e-16!45;CL:0002057!1.58e-15!42;CL:0000084!8.13e-11!25;CL:0000827!8.13e-11!25;CL:0000838!8.92e-09!52;CL:0000542!1.25e-08!53;CL:0000051!1.25e-08!53;CL:0000791!1.81e-08!18;CL:0000789!1.81e-08!18;CL:0002420!1.81e-08!18;CL:0002419!1.81e-08!18;CL:0000790!1.81e-08!18;CL:0000134!2.19e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.46e-31;33!CL:0002057;2.46e-31;33!CL:0000473;9.63e-29;39!CL:0000234;9.63e-29;39!CL:0000576;3.32e-17;48!CL:0000766;1.31e-14;69!CL:0000084;4.12e-11;25!CL:0000738;1.99e-10;136!CL:0002087;3.27e-10;104!CL:0000763;6.51e-10;100!CL:0000094;2.00e-09;8!CL:0000791;1.60e-08;18!CL:0000789;1.60e-08;18!CL:0002419;1.60e-08;18!CL:0000840;2.32e-08;5!CL:0000081;4.65e-08;11!CL:0000624;5.07e-08;6!CL:0000990;7.32e-07;8!CL:0000451;7.46e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.37e-45,136;CL:0000037,5.06e-40,168;CL:0000766,1.28e-39,72;CL:0000988,7.96e-39,177;CL:0002032,8.44e-38,161;CL:0000837,8.44e-38,161;CL:0002031,3.77e-36,120;CL:0002087,5.60e-36,115;CL:0002009,4.19e-34,61;CL:0000557,5.34e-33,67;CL:0002194,3.69e-32,59;CL:0000576,3.69e-32,59;CL:0000040,3.69e-32,59;CL:0000559,3.69e-32,59;CL:0000763,1.22e-31,108;CL:0000049,1.22e-31,108;CL:0000839,2.05e-30,66;CL:0000473,1.98e-28,48;CL:0000234,1.98e-28,48;CL:0000860,3.73e-25,42;CL:0002057,3.73e-25,42;CL:0000084,1.47e-11,25;CL:0000827,1.47e-11,25;CL:0000134,5.53e-10,354;CL:0000094,1.38e-09,8;CL:0002320,2.35e-09,361;CL:0000791,7.60e-09,18;CL:0000789,7.60e-09,18;CL:0002420,7.60e-09,18;CL:0002419,7.60e-09,18;CL:0000790,7.60e-09,18;CL:0000840,2.30e-08,5;CL:0001029,2.30e-08,5;CL:0000219,2.49e-08,386;CL:0000624,3.06e-08,6;CL:0000081,4.06e-08,11;CL:0000838,6.45e-07,52;CL:0000990,8.59e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;5.57e-19;42!CL:0000049;1.86e-10;108!CL:0000790;1.60e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.20e-22!102;UBERON:0003061!3.20e-22!102;UBERON:0002193!7.54e-19!112;UBERON:0002371!6.37e-16!80;UBERON:0001474!1.82e-14!86;UBERON:0002405!1.49e-10!115;UBERON:0004765!3.86e-10!101;UBERON:0001434!3.86e-10!101;UBERON:0000178!2.39e-07!15;UBERON:0000179!2.39e-07!15;UBERON:0000463!2.39e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.38e-08;15!UBERON:0000179;2.38e-08;15!UBERON:0000463;2.38e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.25e-35,98;UBERON:0003061,3.25e-35,98;UBERON:0002193,3.32e-30,108;UBERON:0002371,3.77e-30,76;UBERON:0001474,8.01e-27,82;UBERON:0002405,3.21e-23,93;UBERON:0004765,4.24e-23,90;UBERON:0001434,2.99e-20,100;UBERON:0003081,3.08e-10,203;UBERON:0002384,6.77e-09,371;UBERON:0000178,3.43e-08,15;UBERON:0000179,3.43e-08,15;UBERON:0000463,3.43e-08,15;UBERON:0002204,6.38e-08,167 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0.273748850145768,0.251085279189606,0.458480434487708,0.328402357799783,0.472264687882075,1.57345710739562,4.60595277716655,0.464448369948228,0.919421224478927,0,0.369754010166788,2.16908161624845,0.568676929949686,2.05520307534393,0,0.401088894940283,0.868043482863407,2.01523926815932,3.88672399222775,3.09090681161024,4.36194716338694,5.29026321164333,1.4555043671269,6.74044207026485,9.86802931252382,7.74265927237759,3.45230870786581,2.81776777182011,3.78371567821736,2.41321976515633,1.93645405075148,6.77132432971709,10.1650863353007,10.0975275521403,8.7642158933583,4.59125838556354,5.1348644332175,3.19668562899521,1.64925650093358,4.18873681005427,3.83602275479425,5.22376629531451,2.8369261234557,1.86846674698672,2.76373531782418,1.5644487552606,1.73751075764093,3.02699751316684,5.15588690382591,4.1140110367315,0.422510572623884,0,0.209658645508376,0.561643155732475,0.901061357049038,0.32145117339416,0.285012743741249,0.59675003159727,0,0,0,0,0,0,0,0.661044872784862,0.954053754535364,0,0.587237189370939,1.14681968437569,0,2.80254281490768,1.84368859342554,3.73748563216283,1.57204305099666,4.11202997999018,0.501559486172034,1.62961133316795,0,0,0.891283655081389,1.47302953737419,1.32920336750173,0,0.512365278902701,0.260118695119756,1.97325485524411,1.38175008892924,2.31842468588042,0.444859689486181,0.802622484269139,1.04535523804977,1.24640276967323,4.98186641682498,2.40539211837841,1.77113784413652,0.95569624297229,0.651083453856419,0.950452044448374,1.6563263098555,0.511946444617674,2.49861453104692,1.4206635122641,0.821127996921047,5.84659555351724,4.54648332831962,1.73789284659359,0,0,0,0.361439152384566,0,0,0.795285947051099,0,0.378139268656271,0,0.351339142772504,0.392937226493138,0,0.370784442784429,5.8418530857843,6.44280028007289,2.92507513141503,1.19245312152671,0.571994910780128,1.11437250398869,0,0,0.347140501607594,0,0,0.275118041940067,0,0,0,0.66944122552934,0,0,0,0,0,0.267899184852239,0,0.337834441449967,0,0,0,17.1314542666882,15.511210565933,0,0,0.25326102332916,0.529636723252875,0,0.709336764396714,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0.485618833104395,0.280901613404497,0,0.122834317311768,0,0,0.494533858557114,0,0,0,0,0,0,0.30648779579902,0,0,0.538168907066586,0.213557388818567,0,0,0.206105058476878,0,0,0.337552664482532,0.389748020644795,0,0.0920498986422993,0.161646056818812,0,0.10075209822764,0.169560592310488,0,0,0.286804595389004,2.07355300420312,1.06023814657188,1.51052125730374,0.932949495138334,1.00928340350251,0.72995471815166,0,0,0,0.464367928031979,0.721879481669586,0.591534000199219,0.505754070234305,0.241011029883482,0.882351781859152,0.871517776369625,0.474541238222193,0.134831308160164,0.98110732562673,0.38474715694639,0,0,0,0,0,0.982827216677626,0,0.882926198829301,1.47586126251736,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,0,0,0.190254152234598,0,0,7.14029317653452,4.91408956792399,5.49935300468294,0,0,0.141775097242386,0.626909658919938,0.581267877027924,0,2.46331618947972,0.176096868026452,0,0.144119953416961,1.2624243342638,0.253991577168676,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0.26593811658487,1.04007436911366,0,0,0,0.428933980974443,0,0.823240336780769,0.325736184293735,0,2.37585561880029,0.602878754119172,0,0.099972991182057,0,4.52031382288914,0,0.239624855491583,0,1.42636905040718,0.289562613335158,0.205476322550383,0.179060963239896,0.336255431980582,4.3346767244424,3.01878604803324,3.33691894327346,0.508189248444927,0,0,0.502548796003046,0.637938751653163,11.9841123831549,2.99161459204025,18.2342825911856,0.12269149171914,0.500170521059677,0,0.207970861530807,0.356857977594324,0.788512075169673,0,0.300946099727719,0,0,0,0.184369168541703,0.260650843404249,0,0,2.48121631347465,0.862856803274467,1.921096040462,0.606255142892519,0,0.30239029332968,0.248107807818777,0,0,0.256278298511402,0,0.160853921143607,0,0,0,0.0821271560138091,0.519254429183621,0.116210378459959,0.725156697549733,0.40101294060657,0.184161977871793,0.114814448164607,0.364182336013434,2.09799063935079,0,0.15403067420883,0,0,0.211103257785751,0,0.170093705276516,0.431831832204279,0,0,0,0,0,0,0.438519753291869,0,0,0,0,0.412164046590889,0.366277859273374,0.247528499761764,0,0,0,0,0,0,0.137836572484531,0.214840489736547,0.290033387828457,0.255679882248303,0.0890320356467374,0.165284915360978,0.192190067365106,0.765676274967505,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0,0,0,0.78494864019923,0.179872457583315,0,0.117812402345686,0,0,0.421258456238981,0,0,0,0.409499734223957,0.141405431953713,0,0,0.66343897524122,0,0,0.655894752046633,0,0.30982349809975,0,0,0.196498082026242,0,0.709522128141196,1.05553817648832,0.329294892959902,0,0,0,0,0,0.564862804660675,0,0,0,0.459446800413919,2.02979043692868,0.764637207142375,1.13929437434833,1.19115887728894,2.05681136543097,1.29694662238543,2.70015718619057,0.79312517629427,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| |||
|short_description=p5@TDP2 | |||
}} |
Revision as of 10:28, 22 January 2014
Short description: | p5@TDP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TDP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 39bp_to_ENST00000480495_5end |
EntrezGene: | TDP2 |
HGNC: | 17768 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.25e-35 | 98 |
blood island | 3.25e-35 | 98 |
hemolymphoid system | 3.32e-30 | 108 |
bone marrow | 3.77e-30 | 76 |
bone element | 8.01e-27 | 82 |
immune system | 3.21e-23 | 93 |
skeletal element | 4.24e-23 | 90 |
skeletal system | 2.99e-20 | 100 |
lateral plate mesoderm | 3.08e-10 | 203 |
connective tissue | 6.77e-09 | 371 |
blood | 3.43e-08 | 15 |
haemolymphatic fluid | 3.43e-08 | 15 |
organism substance | 3.43e-08 | 15 |
musculoskeletal system | 6.38e-08 | 167 |