FFCP PHASE1:Hg19::chr6:30525051..30525063,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80742 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21149 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000376557_5end | |||
|coexpression_cluster_id=C4588 | |||
|description=CAGE_peak_3_at_PRR3_5end | |||
|id=chr6:30525051..30525063,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!2.01e-23!239;DOID:162!2.27e-23!235;DOID:2531!2.93e-12!51;DOID:0060083!2.93e-12!51;DOID:0050687!3.95e-11!143;DOID:0050686!8.75e-11!137;DOID:1240!1.09e-09!39;DOID:305!2.19e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.23e-08;39!DOID:2531;6.54e-08;51!DOID:0060083;6.54e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.60e-22,235;DOID:14566,4.12e-22,239;DOID:2531,1.06e-12,51;DOID:0060083,1.06e-12,51;DOID:0050687,1.46e-10,143;DOID:1240,2.05e-10,39;DOID:0050686,2.23e-10,137;DOID:8692,6.61e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.93e-13!94;UBERON:0001016!3.93e-13!94;UBERON:0005743!1.87e-11!86;UBERON:0001017!2.62e-11!82;UBERON:0002346!3.89e-11!90;UBERON:0003075!2.56e-10!86;UBERON:0007284!2.56e-10!86;UBERON:0000955!5.33e-10!69;UBERON:0006238!5.33e-10!69;UBERON:0001049!5.75e-10!57;UBERON:0005068!5.75e-10!57;UBERON:0006241!5.75e-10!57;UBERON:0007135!5.75e-10!57;UBERON:0002619!1.61e-08!22;UBERON:0000956!6.75e-08!25;UBERON:0000203!6.75e-08!25;UBERON:0001950!7.48e-08!20;UBERON:0000924!1.28e-07!173;UBERON:0006601!1.28e-07!173;UBERON:0002616!2.03e-07!59;UBERON:0000153!3.35e-07!129;UBERON:0007811!3.35e-07!129;UBERON:0000033!4.35e-07!123;UBERON:0001869!4.46e-07!32;UBERON:0004121!5.24e-07!169;UBERON:0001893!9.06e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.65e-10;22!UBERON:0000956;1.84e-09;25!UBERON:0000203;1.84e-09;25!UBERON:0001950;2.34e-09;20!UBERON:0001869;1.75e-07;32!UBERON:0001893;2.43e-07;34!UBERON:0002791;4.12e-07;32!UBERON:0003528;6.32e-07;34!UBERON:0002020;6.32e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.19e-13,89;UBERON:0001017,1.20e-11,81;UBERON:0001049,4.54e-11,56;UBERON:0005068,4.54e-11,56;UBERON:0006241,4.54e-11,56;UBERON:0007135,4.54e-11,56;UBERON:0002346,5.35e-11,86;UBERON:0000955,1.72e-10,68;UBERON:0006238,1.72e-10,68;UBERON:0000073,2.94e-10,53;UBERON:0002616,2.94e-10,53;UBERON:0003075,4.08e-10,82;UBERON:0007284,4.08e-10,82;UBERON:0002619,1.33e-09,22;UBERON:0011216,2.10e-09,223;UBERON:0000956,3.42e-09,25;UBERON:0000203,3.42e-09,25;UBERON:0001950,7.29e-09,20;UBERON:0001869,2.36e-08,32;UBERON:0001893,5.63e-08,34;UBERON:0002791,9.17e-08,32;UBERON:0003528,9.53e-08,34;UBERON:0002020,9.53e-08,34;UBERON:0002780,3.19e-07,41;UBERON:0001890,3.19e-07,41;UBERON:0003080,3.19e-07,41;UBERON:0006240,3.19e-07,41;UBERON:0003056,4.27e-07,61 | |||
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| |||
|short_description=p3@PRR3 | |||
}} |
Revision as of 10:49, 22 January 2014
Short description: | p3@PRR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PRR3_5end |
Coexpression cluster: | C4588_neuroblastoma_neuroectodermal_osteosarcoma_medulloblastoma_acute_mesothelioma_small |
Association with transcript: | 0bp_to_ENST00000376557_5end |
EntrezGene: | PRR3 |
HGNC: | 21149 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 2.19e-13 | 89 |
central nervous system | 1.20e-11 | 81 |
neural tube | 4.54e-11 | 56 |
neural rod | 4.54e-11 | 56 |
future spinal cord | 4.54e-11 | 56 |
neural keel | 4.54e-11 | 56 |
neurectoderm | 5.35e-11 | 86 |
brain | 1.72e-10 | 68 |
future brain | 1.72e-10 | 68 |
regional part of nervous system | 2.94e-10 | 53 |
regional part of brain | 2.94e-10 | 53 |
neural plate | 4.08e-10 | 82 |
presumptive neural plate | 4.08e-10 | 82 |
regional part of cerebral cortex | 1.33e-09 | 22 |
organ system subdivision | 2.10e-09 | 223 |
cerebral cortex | 3.42e-09 | 25 |
pallium | 3.42e-09 | 25 |
neocortex | 7.29e-09 | 20 |
cerebral hemisphere | 2.36e-08 | 32 |
telencephalon | 5.63e-08 | 34 |
regional part of telencephalon | 9.17e-08 | 32 |
brain grey matter | 9.53e-08 | 34 |
gray matter | 9.53e-08 | 34 |
regional part of forebrain | 3.19e-07 | 41 |
forebrain | 3.19e-07 | 41 |
anterior neural tube | 3.19e-07 | 41 |
future forebrain | 3.19e-07 | 41 |
pre-chordal neural plate | 4.27e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.60e-22 | 235 |
disease of cellular proliferation | 4.12e-22 | 239 |
hematologic cancer | 1.06e-12 | 51 |
immune system cancer | 1.06e-12 | 51 |
cell type cancer | 1.46e-10 | 143 |
leukemia | 2.05e-10 | 39 |
organ system cancer | 2.23e-10 | 137 |
myeloid leukemia | 6.61e-07 | 31 |