FFCP PHASE1:Hg19::chr6:47277634..47277651,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27242 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13469 | |||
|TSSclassifier=strong | |||
|UniProt=O75509 | |||
|association_with_transcript=0bp_to_ENST00000296861_5end | |||
|coexpression_cluster_id=C4609 | |||
|description=CAGE_peak_1_at_TNFRSF21_5end | |||
|id=chr6:47277634..47277651,- | |||
|ontology_enrichment_celltype=CL:0000066!4.70e-18!254;CL:0000223!3.00e-11!59;CL:0000220!4.26e-11!246;CL:0002321!4.47e-11!248;CL:0002076!8.33e-11!43 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.81e-09;42!CL:0002251;7.93e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.00e-17,253;CL:0000223,1.16e-11,58;CL:0002076,2.30e-11,42;CL:0002321,3.39e-11,250;CL:0002251,8.75e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000223;7.50e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!9.07e-28!625;UBERON:0000468!1.98e-27!659;UBERON:0000480!2.86e-27!626;UBERON:0000922!1.03e-23!612;UBERON:0004111!3.84e-23!241;UBERON:0002050!6.04e-23!605;UBERON:0005423!6.04e-23!605;UBERON:0000923!1.30e-22!604;UBERON:0005291!1.30e-22!604;UBERON:0006598!1.30e-22!604;UBERON:0002532!1.30e-22!604;UBERON:0000062!3.32e-19!511;UBERON:0000475!2.03e-18!365;UBERON:0000119!3.32e-18!312;UBERON:0000025!3.76e-18!194;UBERON:0000477!6.51e-18!286;UBERON:0000483!1.99e-17!309;UBERON:0000481!1.52e-15!347;UBERON:0004119!9.43e-15!169;UBERON:0000925!9.43e-15!169;UBERON:0006595!9.43e-15!169;UBERON:0000466!5.00e-14!126;UBERON:0002100!9.11e-14!216;UBERON:0003914!1.25e-12!118;UBERON:0000064!8.01e-12!219;UBERON:0001007!1.60e-11!155;UBERON:0001555!1.60e-11!155;UBERON:0007026!1.60e-11!155;UBERON:0000464!3.98e-11!104;UBERON:0003104!4.34e-11!238;UBERON:0009142!4.34e-11!238;UBERON:0004921!6.73e-11!129;UBERON:0004185!6.73e-11!129;UBERON:0000077!5.97e-10!130;UBERON:0000926!8.50e-10!448;UBERON:0004120!8.50e-10!448;UBERON:0006603!8.50e-10!448;UBERON:0005177!1.80e-09!107;UBERON:0009569!3.58e-09!113;UBERON:0005256!2.82e-08!143;UBERON:0005911!1.41e-07!82;UBERON:0002553!1.69e-07!70;UBERON:0001041!1.70e-07!98;UBERON:0003886!4.81e-07!63;UBERON:0000490!5.95e-07!138;UBERON:0004872!8.72e-07!84 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,5.87e-23,592;UBERON:0004111,8.74e-23,240;UBERON:0005423,3.46e-21,581;UBERON:0002050,6.39e-19,564;UBERON:0000119,1.57e-18,309;UBERON:0000025,4.93e-18,192;UBERON:0000483,9.56e-18,306;UBERON:0000923,1.61e-17,560;UBERON:0010316,1.61e-17,560;UBERON:0005291,1.61e-17,560;UBERON:0006598,1.61e-17,560;UBERON:0010317,1.61e-17,560;UBERON:0002532,1.61e-17,560;UBERON:0004119,9.48e-14,160;UBERON:0000925,9.48e-14,160;UBERON:0006595,9.48e-14,160;UBERON:0002100,3.69e-13,199;UBERON:0011216,1.89e-12,223;UBERON:0003914,1.93e-12,117;UBERON:0001007,1.99e-10,145;UBERON:0001555,1.99e-10,145;UBERON:0007026,1.99e-10,145;UBERON:0004921,4.77e-10,118;UBERON:0009569,3.08e-09,112;UBERON:0005177,5.84e-09,101;UBERON:0000490,8.98e-08,148;UBERON:0005911,1.28e-07,82;UBERON:0005256,9.03e-07,122;UBERON:0004872,9.55e-07,83 | |||
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| |||
|short_description=p1@TNFRSF21 | |||
}} |
Revision as of 12:14, 22 January 2014
Short description: | p1@TNFRSF21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TNFRSF21_5end |
Coexpression cluster: | C4609_Esophageal_Urothelial_Mesothelial_bile_epidermoid_Mesenchymal_gastric |
Association with transcript: | 0bp_to_ENST00000296861_5end |
EntrezGene: | TNFRSF21 |
HGNC: | 13469 |
UniProt: | O75509 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.00e-17 | 253 |
endodermal cell | 1.16e-11 | 58 |
endo-epithelial cell | 2.30e-11 | 42 |
embryonic cell | 3.39e-11 | 250 |
epithelial cell of alimentary canal | 8.75e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
embryo | 5.87e-23 | 592 |
anatomical conduit | 8.74e-23 | 240 |
developing anatomical structure | 3.46e-21 | 581 |
embryonic structure | 6.39e-19 | 564 |
cell layer | 1.57e-18 | 309 |
tube | 4.93e-18 | 192 |
epithelium | 9.56e-18 | 306 |
germ layer | 1.61e-17 | 560 |
germ layer / neural crest | 1.61e-17 | 560 |
embryonic tissue | 1.61e-17 | 560 |
presumptive structure | 1.61e-17 | 560 |
germ layer / neural crest derived structure | 1.61e-17 | 560 |
epiblast (generic) | 1.61e-17 | 560 |
endoderm-derived structure | 9.48e-14 | 160 |
endoderm | 9.48e-14 | 160 |
presumptive endoderm | 9.48e-14 | 160 |
trunk | 3.69e-13 | 199 |
organ system subdivision | 1.89e-12 | 223 |
epithelial tube | 1.93e-12 | 117 |
digestive system | 1.99e-10 | 145 |
digestive tract | 1.99e-10 | 145 |
primitive gut | 1.99e-10 | 145 |
subdivision of digestive tract | 4.77e-10 | 118 |
subdivision of trunk | 3.08e-09 | 112 |
trunk region element | 5.84e-09 | 101 |
unilaminar epithelium | 8.98e-08 | 148 |
endo-epithelium | 1.28e-07 | 82 |
trunk mesenchyme | 9.03e-07 | 122 |
splanchnic layer of lateral plate mesoderm | 9.55e-07 | 83 |