FFCP PHASE1:Hg19::chr6:132060756..132060761,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C4559 | |||
|description=CAGE_peak_at_chr6:132060756..132060761,+ | |||
|id=chr6:132060756..132060761,+ | |||
|ontology_enrichment_celltype=CL:0002274!5.24e-17!5;CL:0000457!5.24e-17!5;CL:0002191!5.24e-17!5;CL:0000097!5.24e-17!5;CL:0000831!5.24e-17!5;CL:0002028!5.24e-17!5;CL:0000163!3.09e-09!9 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.95e-59;5!CL:0000163;4.29e-33;9!CL:0000151;1.10e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.54e-59,5;CL:0002028,1.54e-59,5;CL:0000163,3.76e-33,9;CL:0000151,2.95e-08,36 | |||
|ontology_enrichment_development_v019=UBERON:0005754;2.32e-13;1!UBERON:0005425;7.24e-13;1!UBERON:0007297;2.58e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8552;7.24e-13;1!DOID:1036;7.88e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:8552,4.77e-13,1;DOID:1036,8.12e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0006947!3.80e-10!3;UBERON:0004054!3.80e-10!3;UBERON:0005904!1.07e-07!4;UBERON:0000341!3.04e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.22e-16;3!UBERON:0004054;1.22e-16;3!UBERON:0000998;2.32e-13;1!UBERON:0006868;2.32e-13;1!UBERON:0001000;7.24e-13;1!UBERON:0000941;7.24e-13;1!UBERON:0001785;7.24e-13;1!UBERON:0002464;7.24e-13;1!UBERON:0004904;7.24e-13;1!UBERON:0001021;7.24e-13;1!UBERON:0005352;7.24e-13;1!UBERON:0005904;1.00e-12;4!UBERON:0003714;4.55e-07;2!UBERON:0005162;4.55e-07;2!UBERON:0000122;4.55e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.00e-16,3;UBERON:0004054,1.00e-16,3;UBERON:0000998,2.32e-13,1;UBERON:0006868,2.32e-13,1;UBERON:0001000,5.38e-13,1;UBERON:0005352,5.38e-13,1;UBERON:0000941,6.82e-13,1;UBERON:0001785,6.82e-13,1;UBERON:0002464,6.82e-13,1;UBERON:0004904,6.82e-13,1;UBERON:0001021,6.82e-13,1;UBERON:0003902,6.82e-13,1;UBERON:0005425,6.82e-13,1;UBERON:0005904,8.67e-13,4;UBERON:0003714,4.42e-07,2;UBERON:0005162,4.42e-07,2;UBERON:0000122,4.42e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46331618947972,5.54705134283324,3.52457796419313,4.03535869567492,2.14612136824846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0.110579259931225,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,1.82832850090172,0,0,0,0.37950746544837,2.06617552674492,0,0,0,0,0,0.265372693510018,1.22206028986725,0.296521128680622,0,0,0,0.802577647298789,0,0.182454789215666,0,0,1.57833761139756,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0.19871461170299,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315132729228895,0.329663433524666,0.539228350833479,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,2.38068310173083,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2754495206101,0.991486114072017,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,3.34426181520935,0.142953088353313,0,0,0,0,0,0,0,0,0,0,3.38709640152743,0,0,0,0,0,0,0,0,0,0,0,1.19370465096821,0,0,0,0,0.385870790539723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0.426467963801962,0.952257725854961,0.0645889098360061,0.0620747142958579,0,0,0.202117188958219,0,0.684466602170562,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr6:132060756..132060761,+ | |||
}} |
Revision as of 13:54, 22 January 2014
Short description: | p@chr6:132060756..132060761, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:132060756..132060761, + |
Coexpression cluster: | C4559_Mast_renal_leukemia_chronic_seminal_small_neuroectodermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.54e-59 | 5 |
basophil mast progenitor cell | 1.54e-59 | 5 |
endocrine cell | 3.76e-33 | 9 |
secretory cell | 2.95e-08 | 36 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.00e-16 | 3 |
internal male genitalia | 1.00e-16 | 3 |
seminal vesicle | 2.32e-13 | 1 |
seminal fluid secreting gland | 2.32e-13 | 1 |
vas deferens | 5.38e-13 | 1 |
spermatic cord | 5.38e-13 | 1 |
cranial nerve II | 6.82e-13 | 1 |
cranial nerve | 6.82e-13 | 1 |
nerve trunk | 6.82e-13 | 1 |
nerve connecting eye with brain | 6.82e-13 | 1 |
nerve | 6.82e-13 | 1 |
retinal neural layer | 6.82e-13 | 1 |
presumptive neural retina | 6.82e-13 | 1 |
duct of male reproductive system | 8.67e-13 | 4 |
neural tissue | 4.42e-07 | 2 |
multi cell component structure | 4.42e-07 | 2 |
neuron projection bundle | 4.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
chronic myeloid leukemia | 4.77e-13 | 1 |
chronic leukemia | 8.12e-07 | 8 |