FFCP PHASE1:Hg19::chr6:138866796..138866819,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57224 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21021 | |||
|TSSclassifier=strong | |||
|UniProt=E9PAK2 | |||
|association_with_transcript=28bp_to_ENST00000342260_5end | |||
|coexpression_cluster_id=C4565 | |||
|description=CAGE_peak_6_at_NHSL1_5end | |||
|id=chr6:138866796..138866819,- | |||
|ontology_enrichment_celltype=CL:0000222!5.02e-23!119;CL:0002139!1.38e-17!24;CL:0000115!5.11e-17!35;CL:0000213!2.56e-16!57;CL:0000215!2.56e-16!57;CL:0002078!1.44e-15!44;CL:0000071!2.56e-13!18;CL:0002546!2.56e-13!18;CL:0000220!5.17e-11!246;CL:0002321!1.28e-10!248;CL:0000055!2.11e-10!180;CL:0000183!2.74e-10!59;CL:0000187!4.36e-09!54;CL:0000680!5.19e-09!57;CL:0000056!5.19e-09!57;CL:0000355!5.19e-09!57;CL:0000393!5.16e-08!60;CL:0000211!5.16e-08!60;CL:1000413!3.91e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.51e-24;24!CL:0000115;7.94e-21;36!CL:0000071;2.09e-18;18!CL:0002078;1.12e-16;45!CL:0000213;2.09e-13;58!CL:0000215;2.09e-13;58!CL:1000413;1.63e-09;9!CL:0002138;1.06e-07;6!CL:0002544;2.77e-07;6!CL:0002543;2.82e-07;6!CL:0002494;7.36e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,5.45e-25,36;CL:0000222,8.23e-25,121;CL:0002139,1.11e-24,24;CL:0002078,2.86e-24,45;CL:0000213,2.51e-22,58;CL:0000215,2.51e-22,58;CL:0000071,1.64e-18,18;CL:0002546,1.64e-18,18;CL:0002321,3.13e-10,250;CL:1000413,1.33e-09,9;CL:0005020,1.00e-07,6;CL:0002138,1.00e-07,6;CL:0005022,1.00e-07,6;CL:0002544,2.61e-07,6;CL:0002543,2.85e-07,6;CL:0002494,6.24e-07,16 | |||
|ontology_enrichment_development_v019=CL:0002546;2.09e-18;18!CL:0000222;3.10e-08;121!CL:0005022;1.06e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001009!1.01e-24!113;UBERON:0002049!1.20e-24!79;UBERON:0007798!1.20e-24!79;UBERON:0000119!2.84e-23!312;UBERON:0004535!3.64e-23!110;UBERON:0000483!1.10e-21!309;UBERON:0003914!1.41e-19!118;UBERON:0004872!1.82e-19!84;UBERON:0000055!2.01e-18!69;UBERON:0000025!1.65e-17!194;UBERON:0000477!8.56e-17!286;UBERON:0000490!1.60e-15!138;UBERON:0004111!6.11e-15!241;UBERON:0001981!6.11e-15!60;UBERON:0007500!6.11e-15!60;UBERON:0004537!6.11e-15!60;UBERON:0006965!6.11e-15!60;UBERON:0001986!2.56e-13!18;UBERON:0004638!2.56e-13!18;UBERON:0004852!2.56e-13!18;UBERON:0006914!9.24e-11!25;UBERON:0004290!1.65e-10!70;UBERON:0000481!1.90e-10!347;UBERON:0000487!1.96e-10!22;UBERON:0002385!2.90e-10!63;UBERON:0001015!2.90e-10!63;UBERON:0000383!2.90e-10!63;UBERON:0000468!5.51e-10!659;UBERON:0001134!6.12e-10!61;UBERON:0002036!6.12e-10!61;UBERON:0003082!6.12e-10!61;UBERON:0007100!6.92e-10!27;UBERON:0000947!1.30e-09!21;UBERON:0010191!1.30e-09!21;UBERON:0000475!1.91e-09!365;UBERON:0000914!3.80e-09!83;UBERON:0002329!3.80e-09!83;UBERON:0003077!3.80e-09!83;UBERON:0003059!3.80e-09!83;UBERON:0007282!3.80e-09!83;UBERON:0009618!3.80e-09!83;UBERON:0007285!3.80e-09!83;UBERON:0000467!3.84e-09!625;UBERON:0000480!5.29e-09!626;UBERON:0000948!2.45e-08!24;UBERON:0005498!2.45e-08!24;UBERON:0004140!2.45e-08!24;UBERON:0009881!2.45e-08!24;UBERON:0004141!2.45e-08!24;UBERON:0003084!2.45e-08!24;UBERON:0007005!2.45e-08!24;UBERON:0004139!2.45e-08!24;UBERON:0004291!2.45e-08!24;UBERON:0005256!2.82e-08!143;UBERON:0001637!4.88e-08!42;UBERON:0003509!4.88e-08!42;UBERON:0004572!4.88e-08!42;UBERON:0000486!6.72e-08!82;UBERON:0004573!3.56e-07!33;UBERON:0004571!3.56e-07!33;UBERON:0002200!3.66e-07!11;UBERON:0006876!3.66e-07!11;UBERON:0003915!3.91e-07!9;UBERON:0004700!3.91e-07!9;UBERON:0001917!3.91e-07!9;UBERON:0002100!9.74e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.09e-18;18!UBERON:0001986;2.09e-18;18!UBERON:0004852;2.09e-18;18!UBERON:0006914;5.34e-16;25!UBERON:0000487;2.87e-15;22!UBERON:0007100;6.01e-13;25!UBERON:0000490;7.09e-11;33!UBERON:0000948;1.02e-10;22!UBERON:0000055;5.11e-10;65!UBERON:0000947;7.97e-10;21!UBERON:0010191;7.97e-10;21!UBERON:0001009;8.27e-10;112!UBERON:0003915;1.63e-09;9!UBERON:0004700;1.63e-09;9!UBERON:0001917;1.63e-09;9!UBERON:0002049;1.64e-09;75!UBERON:0007798;1.64e-09;75!UBERON:0007500;1.87e-09;56!UBERON:0001981;1.87e-09;56!UBERON:0004537;1.87e-09;56!UBERON:0004535;2.90e-09;109!UBERON:0006876;2.81e-08;11!UBERON:0002385;3.43e-08;31!UBERON:0001015;3.43e-08;31!UBERON:0000383;3.43e-08;31!UBERON:0007625;1.89e-07;11!UBERON:0001638;3.81e-07;9!UBERON:0003920;3.81e-07;9!UBERON:0004582;3.81e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001009,8.47e-31,112;UBERON:0004535,1.20e-28,109;UBERON:0002049,4.04e-26,78;UBERON:0007798,4.04e-26,78;UBERON:0003914,4.85e-22,117;UBERON:0004872,1.28e-21,83;UBERON:0000055,4.94e-19,68;UBERON:0004638,1.64e-18,18;UBERON:0001986,1.64e-18,18;UBERON:0004852,1.64e-18,18;UBERON:0000119,2.63e-18,309;UBERON:0000483,1.32e-16,306;UBERON:0006914,4.73e-16,25;UBERON:0007500,9.44e-16,59;UBERON:0001981,9.44e-16,59;UBERON:0004537,9.44e-16,59;UBERON:0006965,9.44e-16,59;UBERON:0000487,2.60e-15,22;UBERON:0000490,1.78e-13,148;UBERON:0007100,6.38e-13,27;UBERON:0000025,7.15e-12,192;UBERON:0000948,1.01e-10,24;UBERON:0005498,1.01e-10,24;UBERON:0004140,1.01e-10,24;UBERON:0009881,1.01e-10,24;UBERON:0004141,1.01e-10,24;UBERON:0003084,1.01e-10,24;UBERON:0007005,1.01e-10,24;UBERON:0004139,1.01e-10,24;UBERON:0004291,1.01e-10,24;UBERON:0000947,1.66e-10,21;UBERON:0010191,1.66e-10,21;UBERON:0003915,1.33e-09,9;UBERON:0004700,1.33e-09,9;UBERON:0001917,1.33e-09,9;UBERON:0004111,1.53e-09,240;UBERON:0007503,1.83e-08,78;UBERON:0006876,2.20e-08,11;UBERON:0002385,1.62e-07,64;UBERON:0001015,1.62e-07,64;UBERON:0000383,1.62e-07,64;UBERON:0001134,1.80e-07,62;UBERON:0002036,1.80e-07,62;UBERON:0003082,1.80e-07,62;UBERON:0007625,1.86e-07,11;UBERON:0005256,1.90e-07,122;UBERON:0001638,2.49e-07,9;UBERON:0003920,2.49e-07,9;UBERON:0004582,2.49e-07,9;UBERON:0007524,4.27e-07,73;UBERON:0002329,4.74e-07,71;UBERON:0003059,4.74e-07,71;UBERON:0007282,4.74e-07,71;UBERON:0004290,4.74e-07,71;UBERON:0009618,4.74e-07,71;UBERON:0003077,7.83e-07,72;UBERON:0007285,7.83e-07,72;UBERON:0001637,8.04e-07,42;UBERON:0003509,8.04e-07,42;UBERON:0004572,8.04e-07,42;UBERON:0003103,9.17e-07,68 | |||
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| |||
|short_description=p6@NHSL1 | |||
}} |
Revision as of 14:14, 22 January 2014
Short description: | p6@NHSL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NHSL1_5end |
Coexpression cluster: | C4565_heart_Meningeal_Endothelial_mesothelioma_Lymphatic_Renal_skeletal |
Association with transcript: | 28bp_to_ENST00000342260_5end |
EntrezGene: | NHSL1 |
HGNC: | 21021 |
UniProt: | E9PAK2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 5.45e-25 | 36 |
mesodermal cell | 8.23e-25 | 121 |
endothelial cell of vascular tree | 1.11e-24 | 24 |
meso-epithelial cell | 2.86e-24 | 45 |
lining cell | 2.51e-22 | 58 |
barrier cell | 2.51e-22 | 58 |
blood vessel endothelial cell | 1.64e-18 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.64e-18 | 18 |
embryonic cell | 3.13e-10 | 250 |
endothelial cell of artery | 1.33e-09 | 9 |
lymphangioblast | 1.00e-07 | 6 |
endothelial cell of lymphatic vessel | 1.00e-07 | 6 |
vascular lymphangioblast | 1.00e-07 | 6 |
aortic endothelial cell | 2.61e-07 | 6 |
vein endothelial cell | 2.85e-07 | 6 |
cardiocyte | 6.24e-07 | 16 |