FFCP PHASE1:Hg19::chr7:1595871..1595896,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=202915 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28797 | |||
|TSSclassifier=strong | |||
|UniProt=B7WNT3 | |||
|association_with_transcript=0bp_to_ENST00000319010_5end | |||
|description=CAGE_peak_5_at_TMEM184A_5end | |||
|id=chr7:1595871..1595896,- | |||
|ontology_enrichment_celltype=CL:0000066!3.86e-42!254;CL:0000223!2.21e-17!59;CL:0002076!3.11e-13!43;CL:0000082!2.41e-11!19;CL:0002368!6.88e-09!13 | |||
|ontology_enrichment_celltype_v019=CL:0000082;1.55e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.85e-27,253;CL:0000223,1.54e-10,58;CL:0000082,9.33e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0001041;1.92e-14;30!UBERON:0008947;2.70e-14;29!UBERON:0009497;2.32e-09;13 | |||
|ontology_enrichment_disease=DOID:305!8.21e-54!106;DOID:0050687!1.20e-40!143;DOID:162!3.81e-25!235;DOID:14566!6.32e-24!239;DOID:299!2.00e-14!25;DOID:1749!5.97e-12!14;DOID:0050615!1.50e-09!16;DOID:7!1.35e-08!39;DOID:1324!1.54e-08!15 | |||
|ontology_enrichment_disease_v019=DOID:305;1.12e-18;106!DOID:299;1.24e-16;25!DOID:1749;1.68e-11;14!DOID:5093;3.97e-10;4!DOID:1612;3.97e-10;4!DOID:7;5.69e-10;39!DOID:0050615;1.43e-09;16!DOID:0050687;7.70e-09;143!DOID:1324;4.98e-08;15!DOID:4362;1.25e-07;5!DOID:3119;2.55e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.80e-56,106;DOID:0050687,7.24e-46,143;DOID:162,1.43e-28,235;DOID:14566,1.36e-27,239;DOID:299,1.26e-16,25;DOID:7,6.75e-12,39;DOID:1749,1.02e-11,14;DOID:5093,4.15e-10,4;DOID:1612,4.15e-10,4;DOID:0050615,8.84e-10,16;DOID:0050686,1.02e-08,137;DOID:1324,3.19e-08,15;DOID:4362,1.17e-07,5;DOID:3119,2.88e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.24e-33!169;UBERON:0000925!1.24e-33!169;UBERON:0006595!1.24e-33!169;UBERON:0001007!3.06e-30!155;UBERON:0001555!3.06e-30!155;UBERON:0007026!3.06e-30!155;UBERON:0004921!3.84e-30!129;UBERON:0004185!3.84e-30!129;UBERON:0000077!3.67e-26!130;UBERON:0001041!8.12e-26!98;UBERON:0001004!1.34e-22!72;UBERON:0008947!9.29e-22!38;UBERON:0003258!9.29e-22!38;UBERON:0000065!1.69e-21!53;UBERON:0005177!1.13e-18!107;UBERON:0005911!7.10e-18!82;UBERON:0000072!1.23e-17!46;UBERON:0000466!8.67e-16!126;UBERON:0005153!2.34e-14!37;UBERON:0009569!9.01e-13!113;UBERON:0002048!1.10e-12!22;UBERON:0000117!1.10e-12!22;UBERON:0000171!1.10e-12!22;UBERON:0000170!1.10e-12!22;UBERON:0005597!1.10e-12!22;UBERON:0000118!1.10e-12!22;UBERON:0003104!1.18e-12!238;UBERON:0009142!1.18e-12!238;UBERON:0000464!2.15e-12!104;UBERON:0005178!4.51e-12!34;UBERON:0002224!4.51e-12!34;UBERON:0005181!1.64e-11!35;UBERON:0004802!2.41e-11!19;UBERON:0000115!2.41e-11!19;UBERON:0001048!7.18e-11!168;UBERON:0005157!1.70e-10!51;UBERON:0004807!1.15e-09!28;UBERON:0001737!2.41e-09!9;UBERON:0000915!4.20e-09!52;UBERON:0000481!1.73e-08!347;UBERON:0006554!3.04e-08!44;UBERON:0001008!6.62e-08!45;UBERON:0000062!2.26e-07!511;UBERON:0005409!3.45e-07!35;UBERON:0003929!3.46e-07!54;UBERON:0002100!3.92e-07!216;UBERON:0002108!6.12e-07!14;UBERON:0001557!7.50e-07!19;UBERON:0000063!8.45e-07!97 | |||
|ontology_enrichment_uberon_v019=UBERON:0000072;1.60e-13;37!UBERON:0000065;1.32e-10;44!UBERON:0001737;6.37e-10;9!UBERON:0001557;6.37e-10;9!UBERON:0002423;5.60e-08;25!UBERON:0004802;1.55e-07;19!UBERON:0000115;1.55e-07;19!UBERON:0001004;1.90e-07;65!UBERON:0002108;9.40e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,4.04e-19,118;UBERON:0001041,2.68e-18,87;UBERON:0001007,1.45e-15,145;UBERON:0001555,1.45e-15,145;UBERON:0007026,1.45e-15,145;UBERON:0004119,9.21e-15,160;UBERON:0000925,9.21e-15,160;UBERON:0006595,9.21e-15,160;UBERON:0008947,9.96e-15,38;UBERON:0003258,9.96e-15,38;UBERON:0000072,1.90e-12,47;UBERON:0000065,2.46e-11,54;UBERON:0001004,9.15e-11,74;UBERON:0001737,3.62e-10,9;UBERON:0005177,6.41e-09,101;UBERON:0005911,1.75e-08,82;UBERON:0009569,2.64e-08,112;UBERON:0009497,4.45e-08,25;UBERON:0000015,4.45e-08,25;UBERON:0002423,4.45e-08,25;UBERON:0006235,4.45e-08,25;UBERON:0004161,4.45e-08,25;UBERON:0001048,5.25e-08,160;UBERON:0007499,6.08e-08,25;UBERON:0004802,9.33e-08,19;UBERON:0000115,9.33e-08,19;UBERON:0008835,1.06e-07,22;UBERON:0003894,1.06e-07,22;UBERON:0009856,1.51e-07,26;UBERON:0009854,2.82e-07,23;UBERON:0005153,8.99e-07,37;UBERON:0000915,9.20e-07,52;UBERON:0002108,9.68e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,3.48900583986214,0.218441372130172,0.791300934685361,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,1.8072355126695,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.946454400318751,1.85443159085912,1.44606617930089,1.10293972732394,1.96091499683166,2.60997681022206,1.34831308160164,1.56977172100277,0.769494313892781,0,0,0,0,0,0.982827216677626,1.18157981336281,0,2.21379189377604,0,0.109750285408626,0,0.201057944823262,0,0,0,0,0,0,0,0,0,7.11183958163348,3.43394464837949,0,0,0,0,0.16798212819886,0,0.626909658919938,0,1.91691339582606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0877350463246,0.40101294060657,0.0920809889358963,0,0,0,0.451199612907412,0.539107359730903,0,0,0.527758144464379,0,0,0,0,0,0,2.03901018436031,2.49322802678617,0.447749509444357,0,0,0,0,0,0.412164046590889,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.576570202095319,1.14851441245126,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,1.34060455107157,1.08890984861323,0.470719003883896,0,1.68471475667626,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0.106824071127473,0,2.94048259177238,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.11709188898084,0,0,0,0,0.71623345421307,0.593929361665277,2.45728561679386,0,0,0,0,0,0.19924798825107,0,16.6275613583822,0,0,0,1.70749867179921,2.32727527078292,0,0.0986434056369336,0,0,0,0,0,4.16684417736373,3.41093999985163,0,5.68967241427498,1.77977555204936,2.83665218121524,7.23961083807076,0,0,0,0,0,0,0,0,2.50558466093677,2.50962739701486,0.0769502585037971,0,0,0,0,0.31900115973192,0.183195186803725,1.06606955203727,1.02193298195737,0,0,0,0,0,0,0,1.26598838716816,7.1822435590025,0.565412285735763,0,0.995261931078505,0.973033209536731,1.22206028986725,0,0,0,0,0,0,0,3.7176277597097,0.242780379534093,1.97292201424695,0,0,0,0.450970258243478,0.207376382794494,0,0.661983911750998,0.627865836814451,1.19472429772959,2.27687636823834,0,0,0.685946781900644,0.522355239482415,0.17472666824203,0,2.41890828222713,2.11959019549938,2.7098100827559,0.0969890164884194,0.0882561266915003,0,0,0,0,3.51992488922645,0.480952921509202,0.640358984218058,0.999048047910651,4.03453168031497,0,3.08870996151536,0.576219191952599,0.869767748958028,0.942776138467182,0,0.313808538937,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,4.65983798109815,2.91497774536727,2.22522817629149,3.16796656114669,1.57483970423598,0,0,0,0,0,0,0,0,0,1.67717343799633,0.0788057072991982,0.472091293214983,0.211200673038813,0.537862017998534,1.72723677587501,0,0,1.27134268827375,0,0,0,0,0,0,0,1.90517903781507,0,0,0,3.59282359557092,1.40963004463334,0.106787412567695,0.157204305099666,0.414239055347196,0,0,0,1.91502377331055,0,0,0,0,4.55456879125679,0,0,0,0,0,0,0,0.499921631848426,0,0,0,11.2400377393652,9.13002480248199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0.489473409012935,0.179088841081487,0.617602894321944,0.219284049578707,0,0,0.675769762612291,1.28120759293973,0.345430341731199,0,0,0,0,0,0,0.245772908753719,1.47918486351039,0,0,0,0,0,0.279759015438889,0.622077260032973,1.15104934173287,0,0,0,0,0,0,0,0,0,2.40171224485641,0,0,0,0,0,0,0,0,0,0,3.04257927353179,0.11796972334774,0.550285795565037,3.11919298605913,0,0,0,0,0,4.68908406739856,0,0.327543835020193,1.47856086217045,0,0,0,0,0,1.09651553371436,0.496211178389294,0,2.93853583571069,0,0,1.21393120847326,0.682986574053893,0.709618961301111,0,0,0,0,0.827356886187777,1.00108261702862,0.39246546425257,0,0,0,1.07963795609311,0,0,3.16027223465453,1.27865567904938,0,0,0,0,0,0.860454717640555,0,0,0.423387050190929,1.8328549483524,0,0,5.25720529449624,2.0611549059201,6.09589624911347,0,0.307988420568741,0,0,2.33939463462106,8.1569817816161,0,0.5647304101948,0.109940516745429,6.34043942980029,1.69783147837478,1.09279780251979,5.64380755633827,0,3.53514820652439,0,0,0,0,0,0,0,2.49975514047921,5.29342307573538,3.85158560108008,0.730336388246517,1.37618785021362,0,0,0,0,3.1741610430924,0,0,0,0,0,0.760191006068622,0,0,0.0918948995348449,0,0,0,0,0,0.639701945702943,0.476128862927481,0.0645889098360061,0,0,0.0636471582781649,0,0.653150243690884,0,0.26940821205835,1.07583308089015,0.332660356546013,0.814032686109745,0,0,0.538951212639521,0,0,0.40689617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| |||
|short_description=p5@TMEM184A | |||
}} |
Revision as of 15:24, 22 January 2014
Short description: | p5@TMEM184A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TMEM184A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000319010_5end |
EntrezGene: | TMEM184A |
HGNC: | 28797 |
UniProt: | B7WNT3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.85e-27 | 253 |
endodermal cell | 1.54e-10 | 58 |
epithelial cell of lung | 9.33e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 4.04e-19 | 118 |
foregut | 2.68e-18 | 87 |
digestive system | 1.45e-15 | 145 |
digestive tract | 1.45e-15 | 145 |
primitive gut | 1.45e-15 | 145 |
endoderm-derived structure | 9.21e-15 | 160 |
endoderm | 9.21e-15 | 160 |
presumptive endoderm | 9.21e-15 | 160 |
respiratory primordium | 9.96e-15 | 38 |
endoderm of foregut | 9.96e-15 | 38 |
segment of respiratory tract | 1.90e-12 | 47 |
respiratory tract | 2.46e-11 | 54 |
respiratory system | 9.15e-11 | 74 |
larynx | 3.62e-10 | 9 |
trunk region element | 6.41e-09 | 101 |
endo-epithelium | 1.75e-08 | 82 |
subdivision of trunk | 2.64e-08 | 112 |
epithelium of foregut-midgut junction | 4.45e-08 | 25 |
anatomical boundary | 4.45e-08 | 25 |
hepatobiliary system | 4.45e-08 | 25 |
foregut-midgut junction | 4.45e-08 | 25 |
septum transversum | 4.45e-08 | 25 |
primordium | 5.25e-08 | 160 |
epithelial sac | 6.08e-08 | 25 |
respiratory tract epithelium | 9.33e-08 | 19 |
lung epithelium | 9.33e-08 | 19 |
hepatic diverticulum | 1.06e-07 | 22 |
liver primordium | 1.06e-07 | 22 |
sac | 1.51e-07 | 26 |
digestive tract diverticulum | 2.82e-07 | 23 |
epithelial bud | 8.99e-07 | 37 |
thoracic segment of trunk | 9.20e-07 | 52 |
small intestine | 9.68e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.80e-56 | 106 |
cell type cancer | 7.24e-46 | 143 |
cancer | 1.43e-28 | 235 |
disease of cellular proliferation | 1.36e-27 | 239 |
adenocarcinoma | 1.26e-16 | 25 |
disease of anatomical entity | 6.75e-12 | 39 |
squamous cell carcinoma | 1.02e-11 | 14 |
thoracic cancer | 4.15e-10 | 4 |
breast cancer | 4.15e-10 | 4 |
respiratory system cancer | 8.84e-10 | 16 |
organ system cancer | 1.02e-08 | 137 |
lung cancer | 3.19e-08 | 15 |
cervical cancer | 1.17e-07 | 5 |
gastrointestinal system cancer | 2.88e-07 | 14 |